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TranscriptomicsComparison of class-B GATA overexpression transcriptomes
We have used Agilent whole genome arrays (v4) to compare the gene expression changes between 10-day-old Arabidopsis wild type seedlings and AtGNLox (AT4G26150), AtGNCox (AT5G56860), AtGATA17ox (AT3G16870), BdGATA6ox (BRADI3G08240) as well as the C-terminal mutation constructs AtGNL_LLM/AAAox and AtG...
ORGANISM(S): Arabidopsis thaliana 
2014-10-02 | E-GEOD-55442 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis AtFBP7 mutant and wild type seedings
Transcript profiling analysis of AtFBP7 mutant seedlings compared to wild type using Arabidopsis ATH1 GeneChip array.
ORGANISM(S): Arabidopsis thaliana 
2007-06-27 | E-GEOD-3864 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis thaliana early response to the phytohormone Gibberellin (GA)
The phytohormone GA controls multiple important developmental processes in plants such as germination, elongation growth and flowering time. In this experiment, we look for early GA response genes in 7 day-old light-grown Arabidopsis seedlings. To this end we compare four data sets: (1) a GA biosynt...
ORGANISM(S): Arabidopsis thaliana 
2008-06-15 | E-GEOD-7353 | biostudies-arrayexpress
TranscriptomicsCSN4-1 mutant analysis
Transcript profiling analysis of csn4-1 (SALK_043720) light grown mutant seedlings compared to wild type using Arabidopsis ATH1 GeneChip array
ORGANISM(S): Arabidopsis thaliana 
2007-06-27 | E-GEOD-3865 | biostudies-arrayexpress
TranscriptomicsVFB mutant analysis
Transcript profiling analysis of vfb (Vier F-Box) mutant seedlings compared to wild type using Arabidopsis ATH1 GeneChip array.
ORGANISM(S): Arabidopsis thaliana 
2007-06-27 | E-GEOD-3863 | biostudies-arrayexpress
GenomicsArabidopsis thaliana
Comparison of class-B GATA overexpression transcriptomes
PRJNA239634 | ENA
TranscriptomicsTranscription profiling of Arabidopsis csn3-1, csn4-1 and csn5 (csn5a-2 csn5b) COP9 signalosome (csn) mutant analysis
Transcript profiling analysis of csn3-1, csn4-1 and csn5 (csn5a-2 csn5b) light grown and dark grown mutant seedlings compared to light grown and dark grown wild type using Arabidopsis ATH1 GeneChip array Experiment Overall Design: We compare eight samples of 7 day-old light grown or dark grown csn3-...
ORGANISM(S): Arabidopsis thaliana 
2008-06-16 | E-GEOD-9728 | biostudies-arrayexpress
TranscriptomicsComparison of transcriptomes in class-B GATA mutants with cytokinin treatments
We have used Agilent whole genome arrays (v4) to compare the gene expression changes between 14 days-old Arabidopsis seedlings with or without cytokinin treatments in wild type as well as the following mutant genotypes: gnc gnl (AT5G56860, AT4G26150), gata16 gata17 gata17l (AT5G49300, AT3G16870, AT...
ORGANISM(S): Arabidopsis thaliana 
2016-03-10 | E-GEOD-71828 | biostudies-arrayexpress
TranscriptomicsComparison of GNC and GNL Overexpression with ga1 and pif1345
We have used Agilent whole genome arrays (v4) to compare the gene expression changes between 5 days-old Arabidopsis ga1 mutants, pif1345 mutants (Leivar et al., 2008) and transgenic lines overexpressing the regulators GNC and GNL/CGA1 to the wild type. All mutants or transgenic lines are in the Colu...
ORGANISM(S): Arabidopsis thaliana 
2010-09-15 | E-GEOD-21256 | biostudies-arrayexpress
TranscriptomicsComparison of arf2, gnc gnl and arf2 gnc gnl transcriptomes
We have used Agilent whole genome arrays (v4) to compare the gene expression changes between 10-day-old Arabidopsis wild type seedlings and arf2-8 (Ellis et al., 2005), gnc gnl (Richter et al., 2011) and arf2 gnc gnl mutants (all Col ecotype). Three independent biological samples were prepared for e...
ORGANISM(S): Arabidopsis thaliana 
2013-07-15 | E-GEOD-35730 | biostudies-arrayexpress
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