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ProteomicsA BioID-derived proximity interactome for SARS-CoV-2 proteins
The novel coronavirus SARS-CoV-2 is responsible for the ongoing COVID-19 pandemic and has caused a major health and economic burden worldwide. Understanding how SARS-CoV-2 viral proteins behave in host cells can reveal underlying mechanisms of pathogenesis and assist in development of antiviral ther...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2021-10-18 | MSV000088245 | MassIVE
TranscriptomicsThe influence of aging, environmental exposures and local sequence features on the variation of DNA methylation in blood
Genome wide DNA methylation profiling of non-pathologic peripheral blood from subjects with no history of cancer. The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in peripheral blood. Samples included 205 norma...
ORGANISM(S): Homo sapiens 
2012-01-10 | E-GEOD-26543 | biostudies-arrayexpress
TranscriptomicsPeripheral blood DNA methylation profiles are predictive of head and neck squamous cell carcinoma
Genome wide DNA methylation profiling and semi-supervised classification of blood samples from a case-control study of head and neck squamous cell carcinoma (HNSCC). The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 ...
ORGANISM(S): Homo sapiens 
2012-06-23 | E-GEOD-30229 | biostudies-arrayexpress
TranscriptomicsNovel DNA methylation targets in oral rinse samples predict survival of patients with oral squamous cell carcinoma
Epigenome-wide association study (EWAS) of oral rinse samples from a cohort of 82 oral squamous cell carcinoma (OSCC) patients. The Illumina Infinium HumanMethylation450 Beadchip was used to obtain DNA methylation profiles across approximately 450,000 CpGs in oral rinse samples. Bisulphite lsconvert...
ORGANISM(S): Homo sapiens 
2014-11-25 | E-GEOD-52793 | biostudies-arrayexpress
TranscriptomicsLeukocyte-adjusted epigenome-wide association studies of blood from solid tumor patients
Epigenome-wide association study (EWAS) of blood samples from a case-control study of bladder cancer. The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in peripheral blood. Samples included peripheral blood samp...
ORGANISM(S): Homo sapiens 
2013-08-29 | E-GEOD-50409 | biostudies-arrayexpress
TranscriptomicsMicroarray analysis of wildtype, Klf3 H275R homozygous and heterozygous, Klf3 CH gene trap homozygous and heterozygous E12.5 embryos
The aim of this experiment was to investigate the dysregulation of gene expression in whole E12.5 embryos containing a gene trap (CH) or point mutation (H275R) within the Klf3 gene Affymetrix microarrays were performed on RNA from wildtype, Klf3 H275R/H275R, Klf3 H275R/+, Klf3 CH homozygous and Klf3...
ORGANISM(S): Mus musculus 
2013-01-31 | E-GEOD-43908 | biostudies-arrayexpress
Genomicsena-DATASET-dkfz_b062-21-02-2018-14:40:33:479-591 - samples
This dataset contains whole exome sequencing data from 24 patients. The Agilent SureSelect Human All Exon 50-Mb target enrichment kit was used to capture all human exons for deep sequencing. For each patient a tumour and control sample has been sequenced on a Illumina HiSeq2000 instrument in paired-...
EGAD00001003973 | EGA
UnknownConcomitant Tricuspid Repair in Patients with Degenerative Mitral Regurgitation.
Not available
S-EPMC8796794 | biostudies-literature
UnknownExome sequencing of 20,791 cases of type 2 diabetes and 24,440 controls.
Not available
S-EPMC6699738 | biostudies-literature
UnknownExtensive identification of genes involved in congenital and structural heart disorders and cardiomyopathy.
Not available
S-EPMC11358025 | biostudies-literature
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