Sectors - OmicsDI

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Unknown (5417)
Transcriptomics (313)
Genomics (261)
Proteomics (58)
Metabolomics (40)
Models (2)
Other (2)
Multiomics (1)

Organisms

Homo sapiens (102)
Mus musculus (34)
Bos taurus (29)
Arabidopsis thaliana (19)
Sus scrofa (17)
Gallus gallus (16)
Saccharomyces cerevisiae (10)
Salmo salar (9)
Ovis aries (6)
Pinus radiata (5)
Rattus norvegicus (5)
Trichoderma reesei (4)
Solanum tuberosum (4)
Rhodospirillum rubrum (3)
Rousettus aegyptiacus (3)
Xylella fastidiosa (3)
Edwardsiella ictaluri 93-146 (2)
Scophthalmus maximus (2)
Actinobacillus pleuropneumoniae serovar 1 str. 4074 (2)
Meleagris gallopavo (2)
Penaeus monodon (2)
Aspergillus oryzae (2)
Gossypium hirsutum (2)
Saccharomyces pastorianus (2)
Lepeophtheirus salmonis (2)
Actinobacillus pleuropneumoniae (2)
Streptococcus suis (2)
Rubus idaeus (2)
Aspergillus fumigatus (2)
Citrus sinensis (2)

Organisms

Homo sapiens (23)
Arabidopsis thaliana (7)
Escherichia coli (6)
Saccharomyces cerevisiae (6)
Mus musculus (4)
Solanum lycopersicum (3)
Schizosaccharomyces pombe (2)
soil metagenome (2)
Cephalotrichum gorgonifer (1)
Paenibacillus sp. I01 (1)
Xylella fastidiosa 9a5c (1)
Phalaenopsis aphrodite subsp. formosana (1)
Parakeelya mirabilis (1)
Ficus microcarpa (1)
Mesorhizobium ciceri ca181 (1)
Morone chrysops x Morone saxatilis (1)
Aspergillus candidus (1)
Crocus sieberi subsp. sublimis (1)
Parthenium argentatum (1)
Catalpa fargesii (1)
Starmerella bombicola (1)
Dothiora sp. (1)
Petunia x hybrida (1)
Bicyclus anynana (1)
Gadus morhua (1)
Trichoderma harzianum (1)
Xylella fastidiosa (1)
Clostridioides difficile (1)
pancrustacean metagenome (1)
pig gut metagenome (1)

Repository

biostudies-arrayexpress (296)
ENA (204)
geo (44)
MetaboLights (39)
EGA (28)
MassIVE (17)
PAXDB (14)
pride (14)
iProX (10)
EVA (4)
FAIRDOMHub (2)
jPOST (2)
GNPS (1)
GPMDB (1)

Tissue

Nerve cord (2)
Brain (1)
Leaf (1)
Liver (1)

Disease

Papillary Carcinoma (1)
Infected (1)
IBDV infected (1)
Multiple myeloma (1)
Control (1)
Not Available (1)
Hepatocellular carcinoma (1)

Technology Type

Mass spectrometry (24)
Mass spectrometry assay (15)
Mass Spectrometry (14)
Shotgun proteomics (8)
Bottom-up proteomics (3)
Gel-based experiment (3)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Data-dependent acquisition (2)
SWATH MS (2)
ILLUMINA, Illumina HiSeq 4000 (1)
ILLUMINA, Illumina HiSeq 2500 (1)
Illumina HiSeq 2000 (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)

Instrument Platform

Illumina NovaSeq 6000 (17)
Illumina HiSeq 2500 (6)
Illumina HiSeq 2000 (6)
Illumina NovaSeq X (3)
NextSeq 500 (3)
Illumina HiScanSQ (2)
Agilent G2505B scanner (2)
TripleTOF 5600 (2)
Chromium Controller / Agilent Bioanalyzer (1)
10x Chromium™ Controller (1)
Chromium Controller (1)
G2505B scanner (Agilent) (1)
None (1)
Ultracentrifuge (1)
Agilent 2100 Bioanalyzer (1)
Spectronic Helios Alpha UV-Vis spectrophotometer (1)
NA (1)
Illumina HiSeq X (1)
TruSeq (Illumina, Novogene, Genomic Centre Cambridge, CB4 0FW, UK.) (1)
NanoDrop spectrophotometer and the Agilent 2100 Bioanalyzer (1)
Histopaque-1077,FACSAria Fusion Sorter,Flow Cytometer (1)
NextSeq 2000 (1)
GenePix 4000B (1)
BGISEQ-500 (1)
Illumina MiSeq (1)
Ion Torrent S5 XL (1)
Illumina HiSeq 3000 (1)
Illumina HiSeq 4000 (1)
Affymetrix (1)
Instrument (1)

Publication Date

2010 (63)
2012 (37)
2013 (36)
2009 (35)
2014 (33)
2024 (28)
2025 (25)
2015 (25)
2016 (23)
2026 (21)
2011 (21)
2019 (18)
2021 (13)
2020 (11)
2022 (10)
2018 (10)
2008 (9)
2023 (8)
2017 (7)
2007 (6)
2005 (2)
2006 (1)

UNIPROT ID/AC

1433A_SOYBN (6)
1433B_SOYBN (6)
1433C_SOYBN (6)
1433D_SOYBN (6)
3847.GLYMA01G25116.1 (6)
3847.GLYMA01G33803.1 (6)
3847.GLYMA02G01060.2 (6)
3847.GLYMA02G01170.1 (6)
3847.GLYMA02G04090.1 (6)
3847.GLYMA02G07430.1 (6)
3847.GLYMA02G24818.1 (6)
3847.GLYMA02G40806.1 (6)
3847.GLYMA03G00640.1 (6)
3847.GLYMA03G05481.1 (6)
3847.GLYMA03G06350.3 (6)
3847.GLYMA03G11580.1 (6)
3847.GLYMA03G13810.1 (6)
3847.GLYMA03G15040.1 (6)
3847.GLYMA03G17290.1 (6)
3847.GLYMA03G24710.1 (6)
3847.GLYMA03G25541.1 (6)
3847.GLYMA03G29801.1 (6)
3847.GLYMA03G35860.1 (6)
3847.GLYMA03G36580.1 (6)
3847.GLYMA03G40130.1 (6)
3847.GLYMA04G07370.1 (6)
3847.GLYMA04G13531.1 (6)
3847.GLYMA04G16130.1 (6)
3847.GLYMA04G19010.1 (6)
3847.GLYMA04G20640.1 (6)

CHEBI ID

CHEBI:28842 (5)
CHEBI:15428 (5)
CHEBI:28044 (5)
CHEBI:17821 (5)
CHEBI:30769 (5)
CHEBI:30805 (4)
CHEBI:17822 (4)
CHEBI:18132 (4)
CHEBI:25094 (4)
CHEBI:16040 (4)
CHEBI:26986 (4)
CHEBI:18257 (4)
CHEBI:16831 (4)
CHEBI:15741 (4)
CHEBI:27266 (4)
CHEBI:15891 (4)
CHEBI:27897 (4)
CHEBI:15756 (4)
CHEBI:10319 (3)
CHEBI:28324 (3)
CHEBI:69081 (3)
CHEBI:30813 (3)
CHEBI:30754 (3)
CHEBI:61058 (3)
CHEBI:17992 (3)
CHEBI:28635 (3)
CHEBI:19062 (3)
CHEBI:33508 (3)
CHEBI:17026 (3)
CHEBI:29019 (3)

Metabolite Name

Uracil (6)
Citric acid (6)
Stearic acid (6)
Hypoxanthine (6)
Heptadecanoic acid (5)
Glutathione (5)
Kynurenic acid (5)
L-Threonine (5)
Pantothenic acid (5)
Taurine (5)
4-Hydroxybenzaldehyde (5)
Glyceric acid (5)
Adenosine (5)
Suberic acid (5)
Palmitic acid (5)
Dodecanoic acid (5)
Xanthine (5)
Guanosine (5)
Uridine (5)
Sucrose (5)
Creatine (5)
L-Carnitine (5)
Glutamylphenylalanine (4)
Nicotine (4)
Epinephrine (4)
Pentadecanoic acid (4)
Ecgonine (4)
Phosphate (4)
Thymine (4)
Pyroglutamic acid (4)

First Public Date

2014 (34)
2021 (28)
2025 (21)
2026 (20)
2023 (20)
2018 (17)
2024 (16)
2020 (12)
2019 (10)
2022 (9)
2017 (6)
2015 (6)
2013 (4)
2016 (1)

Classification

bacteria (12)
fungi (2)

Study type

Transcription profiling by array (177)
RNA-seq of coding RNA (44)
Comparative genomic hybridization by array (32)
RNA-seq of coding RNA from single cells (10)
RNA-seq of non coding RNA (8)
Unknown experiment type (3)
RNA-seq of total RNA (3)
Transcription profiling by SAGE (2)
Transcription profiling by RT-PCR (2)
Other (2)
ChIP-seq (2)
Animal - One-color microarray (1)
ChIP-chip by tiling array (1)
One-color microarray (1)
Plant - One-color microarray (1)
High-throughput sequencing (1)
Transcription profiling by tiling array (1)
Antigen profiling (1)
Spatial transcriptomics by high-throughput sequencing (1)
Bisulfite-seq (1)
RIP-seq (1)
DNA-seq (1)

Release Date

2022 (846)
2025 (766)
2023 (762)
2024 (707)
2021 (667)
2020 (465)
2019 (288)
2018 (259)
2017 (181)
2016 (132)
2026 (106)
2015 (98)
2014 (89)
2010 (79)
2013 (77)
2012 (69)
2011 (46)
2009 (26)
2008 (17)
2007 (9)
2006 (7)
2005 (6)
2004 (5)
2002 (2)
2001 (2)
2003 (1)
1998 (1)

Lab affiliation

Department of Bioactivity and Food Analysis, Institute of Food Science Research (CIAL, CSIC-UAM, CEI UAM+CSIC), Nicolás Cabrera 9, 28049 Madrid, Spain (2)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) Technical University Munich Gregor-Mendel-Straße 4 85354 Freising GERMANY (1)
Department of Physics and Section of Molecular Biology, Division of Biological Sciences, University of California at San Diego, La Jolla, CA 92093-0374 USA (1)
European Molecular Biology Laboratory, Structural and Computational Biology Unit, Heidelberg, Germany (1)
Head Department of Mass spectrometry of BioMacromolecules, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, 1098XH, Amsterdam, The Netherlands. (1)
Key Laboratory of Quantitative Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China (1)
Michel Salzet, Univ. Lille, Inserm, U-1192 - Laboratoire Protéomique, Réponse Inflammatoire et Spectrométrie de Masse-PRISM, F-59000 Lille, France (1)
Professor and Deputy Director, Centre for Systems Biology and Molecular Medicine, Yenepoya Research Center, Yenepoya (Deemed to be University), Mangalore 575018, India (1)
Professor, Department of Botany, University of Delhi (1)
Staff Scientist Biological Systems & Engineering Division Lawrence Berkeley National Laboratory Berkeley CA 94720 (1)
State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry (1)
Structural Biology of Nuclear Receptors, Department of Biochemistry and Molecular Biomedicine, Faculty of Biology, University of Barcelona (UB), 08028 Barcelona, Spain (1)
Univ. Lille, Inserm, U-1192 - Laboratoire Protéomique, Réponse Inflammatoire et Spectrométrie de Masse-PRISM, F-59000 Lille, France (1)

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Tumor T4 Sectors

The following CGH experiments were conducted on four sectors (S1-S4) from a single primary ductal carcinoma tumor (T4).

ORGANISM(S): Homo sapiens

2009-07-10 | GSE16601 | GEO

Tumor T3 Sectors

The following CGH experiments were conducted on four sectors (S1-S4) from a single primary ductal carcinoma tumor (T3).

ORGANISM(S): Homo sapiens

2009-07-10 | GSE16600 | GEO

Tumor T2 Sectors

The following CGH experiments were conducted on four sectors (S1-S4) from a single primary ductal carcinoma tumor (T2).

ORGANISM(S): Homo sapiens

2009-07-10 | GSE16599 | GEO

Tumor T1 Sectors

The following CGH experiments were conducted on four sectors (S1-S4) from a single primary ductal carcinoma tumor (T1).

ORGANISM(S): Homo sapiens

2009-07-10 | GSE16598 | GEO

Tumor T6 Sectors

The following CGH experiments were conducted on four sectors (S1-S4) from a single primary ductal carcinoma tumor (T6) using the Sector-Ploidy-Profiling (SPP) Approach. SPP involves macro-dissecting the tumor, flow-sorting nuclei by differences in total genomic DNA content and profiling the genome o...

ORGANISM(S): Homo sapiens

2009-07-10 | GSE16603 | GEO

Tumor T5 Sectors

The following CGH experiments were conducted on four sectors (S1-S4) from a single primary ductal carcinoma tumor (T4) using the Sector-Ploidy-Profiling (SPP) Approach. SPP involves macro-dissecting the tumor, flow-sorting nuclei by differences in total genomic DNA content and profiling the genome o...

ORGANISM(S): Homo sapiens

2009-07-10 | GSE16602 | GEO

Tumor T16 Sectors

The following CGH experiments were conducted on four sectors (S1-S4) from a single primary ductal carcinoma tumor (T16) using the Sector-Ploidy-Profiling (SPP) Approach. SPP involves macro-dissecting the tumor, flow-sorting nuclei by differences in total genomic DNA content and profiling the genome ...

ORGANISM(S): Homo sapiens

2009-07-10 | GSE16664 | GEO

Tumor T15 Sectors

The following CGH experiments were conducted on four sectors (S1-S4) from a single primary ductal carcinoma tumor (T15) using the Sector-Ploidy-Profiling (SPP) Approach. SPP involves macro-dissecting the tumor, flow-sorting nuclei by differences in total genomic DNA content and profiling the genome ...

ORGANISM(S): Homo sapiens

2009-07-10 | GSE16663 | GEO

Tumor T14 Sectors

The following CGH experiments were conducted on six sectors (S1-S6) from a single primary ductal carcinoma tumor (T14) using the Sector-Ploidy-Profiling (SPP) Approach. SPP involves macro-dissecting the tumor, flow-sorting nuclei by differences in total genomic DNA content and profiling the genome o...

ORGANISM(S): Homo sapiens

2009-07-10 | GSE16611 | GEO

Tumor T8 Sectors

The following CGH experiments were conducted on five sectors (S1-S5) from a single primary ductal carcinoma tumor (T8) using the Sector-Ploidy-Profiling (SPP) Approach. SPP involves macro-dissecting the tumor, flow-sorting nuclei by differences in total genomic DNA content and profiling the genome o...

ORGANISM(S): Homo sapiens

2009-07-10 | GSE16605 | GEO

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6093 Results

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