Sepal - OmicsDI

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Transcriptomics (346)
Unknown (192)
Genomics (63)
Proteomics (25)
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Organisms

Arabidopsis thaliana (154)
Solanum lycopersicum (13)
Medicago truncatula (10)
Vitis vinifera (10)
Oryza sativa Japonica Group (9)
Oryza sativa (8)
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Zea mays (6)
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Organisms

Arabidopsis thaliana (6)
Glycine max (2)
Phalaenopsis equestris (1)
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Sinningia speciosa (1)
Antirrhinum majus (1)
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Heptacodium miconioides (1)
Caladenia denticulata (1)
Ziziphus jujuba (1)
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Hydrangea macrophylla (1)
Spinacia oleracea (1)

Repository

biostudies-arrayexpress (353)
ENA (48)
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geo (8)
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pride (3)
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ExpressionAtlas (1)
EVA (1)

Tissue

Silique (2)
Sepal (2)
Cauline leaf (2)
Hypocotyl (2)
Petal (2)
Stamen (2)
Carpel (2)
Flower (2)
Cotyledon (2)
Seed (2)
Root (2)
Pollen (2)
Flower bud (2)
Plant cell (2)
Mixed shoot apical meristem, cotyledon and first leaves (1)
Petiole (1)
Flower pedicel (1)
Fruit valve (1)
Stem internode (1)
Adult vascular leaf (1)
Stem node (1)
Fruit septum (1)
Rosette leaf (1)
Plant callus (1)
Root tip (1)
Cell culture (1)
Fruit (1)
Leaf (1)
Rosette (1)
Shoot (1)

Disease

Melanoma (1)

Technology Type

Mass spectrometry (13)
Mass spectrometry assay (7)
Mass Spectrometry (3)
Shotgun proteomics (2)
SWATH MS (1)

Instrument Platform

Illumina HiSeq 2000 (16)
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Gentle MACS; BD FACS Aria III (1)
ICELL8 MultiSample NanoDispenser (1)
Affymetrix GeneChip (1)
ScanArray Lite [Perkin Elmer] (1)
Na (1)
GenePix 4000A [Axon Instruments] (1)
ScanArray Express HT [PerkinElmer] (1)
Illumina Genome Analyzer II (1)
Illumina NovaSeq X (1)
To be provided (1)
Illumina HiSeq 1000 (1)
DNBSEQ-T7 (1)
Illumina MiSeq (1)
NextSeq 550 (1)
Illumina HiSeq 3000 (1)
Illumina HiSeq 4000 (1)
- (1)
6546 Q-TOF LC/MS (1)
LC-qToF-MS (1)
LCMS-9030, Shimadzu (1)
LTQ Orbitrap Velos (1)
Lumos tribrid (1)
Orbitrap Fusion Lumos (1)

Publication Date

2011 (52)
2014 (47)
2013 (35)
2012 (32)
2008 (32)
2015 (24)
2010 (24)
2016 (18)
2009 (17)
2026 (15)
2025 (14)
2007 (14)
2020 (12)
2021 (11)
2022 (10)
2005 (10)
2024 (7)
2023 (7)
2019 (7)
2006 (7)
2004 (6)
2018 (5)
2017 (3)

UNIPROT ID/AC

14332_ARATH (7)
14333_ARATH (7)
14334_ARATH (7)
14335_ARATH (7)
14336_ARATH (7)
14337_ARATH (7)
14338_ARATH (7)
1A112_ARATH (7)
2A5B_ARATH (7)
2AAA_ARATH (7)
2AAB_ARATH (7)
2AAG_ARATH (7)
2AB2A_ARATH (7)
2ABA_ARATH (7)
2ABB_ARATH (7)
3HID1_ARATH (7)
3HIDH_ARATH (7)
4CL1_ARATH (7)
4CLL5_ARATH (7)
4CLL7_ARATH (7)
4CLL9_ARATH (7)
4CLLA_ARATH (7)
5FCL_ARATH (7)
6PGD1_ARATH (7)
6PGD2_ARATH (7)
6PGD3_ARATH (7)
6PGL2_ARATH (7)
6PGL3_ARATH (7)
6PGL5_ARATH (7)
A0A178W0K0_ARATH (7)

CHEBI ID

CHEBI:36090 (3)
CHEBI:18186 (3)
CHEBI:28044 (3)
CHEBI:30769 (3)
CHEBI:69657 (2)
CHEBI:15864 (2)
CHEBI:32374 (2)
CHEBI:16704 (2)
CHEBI:16335 (2)
CHEBI:27897 (2)
CHEBI:182979 (1)
CHEBI:182976 (1)
CHEBI:182258 (1)
CHEBI:182972 (1)
CHEBI:183019 (1)
CHEBI:160656 (1)
CHEBI:183017 (1)
CHEBI:160800 (1)
CHEBI:166281 (1)
CHEBI:163204 (1)
CHEBI:160635 (1)
CHEBI:183013 (1)
CHEBI:159455 (1)
CHEBI:9577 (1)
CHEBI:183010 (1)
CHEBI:161276 (1)
CHEBI:183004 (1)
CHEBI:163774 (1)
CHEBI:163588 (1)
CHEBI:182999 (1)

Metabolite Name

Isoquercitrin (4)
Chlorogenic acid (4)
Kaempferol (4)
Rutin (4)
Ginkgolide B (3)
Maltol (3)
4-Hydroxycinnamic acid (3)
Umbelliferone (3)
Nicotine (3)
Pipericine (3)
Matairesinol (3)
Naringenin (3)
Homoeriodictyol (3)
Trigonelline (3)
Betaine (3)
Sphingosine (3)
Lumichrome (3)
Phytosphingosine (3)
Piperidine (3)
Astragalin (3)
Aspirin (3)
Apigenin (3)
Genipin (3)
Stearic acid (3)
Sebacic acid (3)
Arginine (3)
Pipecolic acid (3)
Adenosine (3)
Raffinose (3)
Phenylalanine (3)

First Public Date

2021 (9)
2022 (7)
2026 (4)
2023 (4)
2020 (4)
2015 (4)
2014 (4)
2025 (3)
2018 (3)
2019 (2)
2013 (2)
2024 (1)
2017 (1)

Study type

Transcription profiling by array (184)
RNA-seq of coding RNA (86)
RNA-seq of non coding RNA (57)
Plant - High-throughput sequencing (6)
Methylation profiling by high throughput sequencing (6)
ChIP-seq (4)
DNA-seq (3)
Unknown experiment type (2)
Transcription profiling by tiling array (1)
Ribo-seq (1)
Other (1)
RNA-seq of total RNA (1)

Release Date

2014 (56)
2011 (51)
2013 (44)
2012 (37)
2015 (36)
2008 (32)
2021 (28)
2010 (26)
2022 (25)
2025 (24)
2016 (23)
2019 (21)
2024 (20)
2009 (19)
2023 (15)
2020 (15)
2007 (14)
2017 (13)
2018 (12)
2005 (10)
2006 (8)
2026 (7)
2004 (5)
2003 (3)
2000 (1)

Lab affiliation

Institute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia (UKM), 43600 Bangi, Selangor, Malaysia (1)
TUM (1)
Weill Institute for Cell and Molecular Biology and Section of Plant Biology, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA (1)

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Gene expression analysis on Hydrangea macrophylla sepal pigmentation due to aluminum accumulation

Most blue color in flowers is due to anthocyanin, and considerable proportion of blue coloration can be attributed to metal-complexed anthocyanins. Recently, we reported vacuolar localized iron-transporter in blue petal cells of Tulipa gesneriana. However the mechanism of another metal ion transport...

ORGANISM(S): Hydrangea macrophylla

2012-12-20 | E-GEOD-26665 | biostudies-arrayexpress

Arabidopsis sepal RNA-Seq

RNA-Seq from single sepal Col-0 Arabidopsis samples

PRJEB52917 | ENA

Brassinosteroids mediate proper coordination of sepal elongation

PRJNA1295340 | ENA

Brassinosteroids mediate proper coordination of sepal elongation [Spatial Transcriptomics]

PRJNA1428205 | ENA

Brassinosteroids mediate proper coordination of sepal elongation

Arabidopsis sepals must grow in a coordinated and robust fashion to a consistent size and shape to close and protect the developing flower bud. To understand how this robust coordination occurs, we use the loss of robustness mutant development related myb-like1 (drmy1), which exhibits variable sepal...

ORGANISM(S): Arabidopsis thaliana

2025-09-24 | GSE303396 | GEO

Brassinosteroids mediate proper coordination of sepal elongation [Spatial Transcriptomics]

ORGANISM(S): Arabidopsis thaliana

2026-03-02 | GSE320437 | GEO

Phalaenopsis panda sepal

PRJNA497663 | ENA

Brassinosteroids mediate proper coordination of sepal elongation.

Not available

S-EPMC12338598 | biostudies-literature

Arabidopsis AGAMOUS Regulates Sepal Senescence by Driving Jasmonate Production.

Not available