Sha Long L - OmicsDI

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Unknown (125)
Transcriptomics (37)
Genomics (2)
Metabolomics (2)

Organisms

Homo sapiens (14)
Arabidopsis thaliana (12)
Mus musculus (5)
Rattus norvegicus (3)
Pyrus hybrid cultivar (1)
Pyrus pyrifolia (1)
Caenorhabditis elegans (1)
Saccharomyces cerevisiae (1)
Drosophila melanogaster (1)

Organisms

Rattus norvegicus (1)

Repository

biostudies-arrayexpress (38)
MetaboLights (2)
geo (1)
ENA (1)

Technology Type

Mass spectrometry (2)

Instrument Platform

Illumina NovaSeq 6000 (9)
N/A (6)
Chromium Next GEM Single Cell Multiome ATAC + Gene Expression Reagent Bundle, (4)
10X Genomics reagent kit (3)
10X Chromium Nuclei Isolation Kit (2)
10X Chromium On-Chip Multiplex (1)
Chromium Next GEM Single Cell Multiome Reagent Bundle (1)
10X Genomics reagents (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 4000 (1)
6550 Q-TOF LC-MS Agilent (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2025 (5)
2010 (5)
2009 (5)
2007 (5)
2026 (3)
2022 (3)
2011 (3)
2020 (2)
2019 (2)
2016 (2)
2015 (2)
2014 (1)
2013 (1)
2012 (1)
2006 (1)

CHEBI ID

CHEBI:142276 (1)
CHEBI:143032 (1)
CHEBI:143033 (1)
CHEBI:143034 (1)
CHEBI:143035 (1)
CHEBI:143036 (1)
CHEBI:143037 (1)
CHEBI:143038 (1)
CHEBI:143039 (1)
CHEBI:143040 (1)
CHEBI:143041 (1)
CHEBI:143042 (1)
CHEBI:143043 (1)
CHEBI:143044 (1)
CHEBI:143045 (1)
CHEBI:143046 (1)
CHEBI:143047 (1)
CHEBI:143048 (1)
CHEBI:143049 (1)
CHEBI:143050 (1)
CHEBI:143051 (1)
CHEBI:143052 (1)
CHEBI:143053 (1)
CHEBI:143054 (1)
CHEBI:143055 (1)
CHEBI:143056 (1)
CHEBI:143057 (1)
CHEBI:143058 (1)
CHEBI:143059 (1)
CHEBI:143060 (1)

Metabolite Name

()-1,2-Epoxyneomenthyl acetate (1)
()-6-Chlorotryptophan (1)
()-Tryptophan (1)
()-erythro-Isoleucine (1)
(+)-12-methyl myristic acid (1)
(1'R)-Nepetalic acid (1)
(10E)-8-Hydroxydodec-10-enoylcarnitine (1)
(10Z)-12-Hydroxyhexadecenoylcarnitine (1)
(12E)-10-Hydroxytetradec-12-enoylcarnitine (1)
(1R,2R,4R,5S)-()-p-Menthane-2,5-diol (1)
(2-Acetyloxy-3-hydroxypropyl) (E)-octadec-9-enoate (1)
(2-Hydroxy-3-phosphonooxypropyl) octadec-9-enoate (1)
(22R,23R)-22,23-dihydroxy-campest-4-en-3-one (1)
(2E,4E,6E,8E,10E)-11-[(4R)-4-hydroxy-2,6,6-trimethylcyclohexen-1-yl]-5,9-dimethylundeca-2,4,6,8,10-pentaenal (1)
(2R,3R,4R)-2-Amino-4-hydroxy-3-methylpentanoic acid (1)
(2R,4R)-2-phenylthiazolidine-4-carboxylic acid (1)
(2S)-2-Hydroxy-2-(propan-2-yl)butanedioylcarnitine (1)
(2S,4S)-Pinnatanine (1)
(3R,5R)-7-[(1S,2R,3R,8S,8Ar)-3-hydroxy-2-methyl-8-(2-methylbutanoyloxy)-1,2,3,7,8,8a-hexahydronaphthalen-1-yl]-3,5-dihydroxyheptanoic acid (1)
(3S)-3-hydroxycyclocitral (1)
(3S,3'S,5R,5'R,6R)-3,6-Epoxy-5,6-dihydro-3',5,8'-trihydroxy-beta,kappa-caroten-6'-one (1)
(3Z)-2-Propylpent-3-enoic acid (1)
(3Z)-phytochromobilin (1)
(4E)-3-Hydroxydodec-4-enoylcarnitine (1)
(4E,7E,10E,13E)-Hexadeca-4,7,10,13-tetraenoic acid (1)
(6S)-Tetrahydro-L-biopterin (1)
(8R,9S,10S,13S,14S,17R)-16-Fluoro-17-hydroxy-10,13-dimethyl-1,2,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydrocyclopenta[a]phenanthren-3-one (1)
(8S,9S,10R,13S,14S,17R)-1-Hexadecanoyl-11,17-dihydroxy-17-(2-hydroxyacetyl)-10,13-dimethyl-7,8,9,11,12,14,15,16-octahydro-6H-cyclopenta[a]phenanthren-3-one (1)
(8Z,11Z)-3-Icosa-8,11-dienoylcarnitine (1)
(9E)-Tridec-9-enoylcarnitine (1)

First Public Date

2025 (1)

Study type

Transcription profiling by array (24)
Single nucleus RNA sequencing (4)
RNA-seq of coding RNA from single cells (3)
RNA-seq of coding RNA (3)
Plant - One-color microarray (1)
ScATAC-seq (1)
ChIP-seq (1)

Release Date

2025 (27)
2022 (19)
2020 (15)
2021 (13)
2024 (11)
2023 (11)
2026 (9)
2010 (8)
2016 (7)
2015 (7)
2014 (7)
2009 (7)
2007 (5)
2019 (4)
2013 (4)
2011 (4)
2012 (2)
2006 (1)
2018 (1)
2017 (1)

Tags

xref:PubMed:40806484 (1)

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Transcription profiling of hippocampus samples from the Rattus norvegicus Syracuse High Avoidance (SHA) and Syracuse Low Avoidance (SLA) strains

Comparisons of hippocampi of Syracuse High Avoidance (SHA) and Syracuse Low Avoidance (SLA) learning rats

ORGANISM(S): Rattus norvegicus

2007-10-12 | E-GEOD-932 | biostudies-arrayexpress

DNA accessibility profile of three C. elegans tissues during development

We show there is minimal genome-wide chromatin rearrangements (as measured by DNA accessibility) during tissue differentiation in C. elegans transgenic expression of E. coli DAM (DNA Adenine Methyltransferase) from tissue-specific promoters followed by mapping of methylated sites using a procedure t...

ORGANISM(S): Caenorhabditis elegans

2011-04-16 | E-GEOD-23042 | biostudies-arrayexpress

Genome sequence data of the antagonistic soil-borne yeast Cyberlindnera sargentensis (SHA 17.2).

Not available

S-EPMC8762083 | biostudies-literature

Microarray analysis of Bay-0 x Sha recombinant inbred lines at four seed germination stages

Seed germination is characterized by a constant change of gene expression across different time points. These changes are related to specific processes, which eventually determine the onset of seed germination. To get a better understanding on the regulation of gene expression during seed germinatio...