Shaw J M JM - OmicsDI

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Unknown (775)
Proteomics (8)
Transcriptomics (2)
Metabolomics (2)

Organisms

Mus musculus (4)
Homo sapiens (2)
Rattus norvegicus (1)
Bacillus subtilis subsp. subtilis str. 168 (1)
Escherichia coli (1)

Repository

pride (6)
biostudies-arrayexpress (3)
MetaboLights (2)
MassIVE (1)

Tissue

Brain (2)
T cell (2)

Disease

Alzheimer's disease (1)

Technology Type

Mass Spectrometry (6)
Mass spectrometry (2)
Bottom-up proteomics (2)
Shotgun proteomics (2)
Gel-based experiment (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
LTQ Orbitrap Elite (1)
Q Exactive (1)

Publication Date

2026 (2)
2020 (2)
2019 (2)
2015 (1)
2011 (1)
2010 (1)
2024 (1)
2022 (1)
2021 (1)

CHEBI ID

CHEBI:61042 (2)
CHEBI:64561 (2)
CHEBI:64563 (2)
CHEBI:72736 (2)
CHEBI:72737 (2)
CHEBI:10043 (1)
CHEBI:10072 (1)
CHEBI:102485 (1)
CHEBI:104011 (1)
CHEBI:110187 (1)
CHEBI:1142 (1)
CHEBI:116314 (1)
CHEBI:131145 (1)
CHEBI:131439 (1)
CHEBI:131659 (1)
CHEBI:131691 (1)
CHEBI:131738 (1)
CHEBI:131743 (1)
CHEBI:131887 (1)
CHEBI:131924 (1)
CHEBI:131989 (1)
CHEBI:132004 (1)
CHEBI:132007 (1)
CHEBI:132502 (1)
CHEBI:132539 (1)
CHEBI:132540 (1)
CHEBI:132543 (1)
CHEBI:132544 (1)
CHEBI:132591 (1)
CHEBI:132676 (1)

Metabolite Name

(+)-2-Sterpurene-6,12,15-triol (1)
(+)-8-hydroxycalamenene (1)
(+)-Norushinsunine N-oxide (1)
(-)-Neolinderatin (1)
(-)-Stercobilin (1)
(10betaH,11xi)-11-Hydroxy-13-nor-6-eremophilen-8-one (1)
(1R,16Z,24E,26E,28Z)-1,18-dihydroxy-12-[1-(4-hydroxy-3-methoxycyclohexyl)propan-2-yl]-19,30-dimethoxy-15,17,21,23,29-pentamethyl-35-methylidene-11,36-dioxa-4-azatricyclo[30.3.1.0?,?]hexatriaconta-16,24,26,28-tetraene-2,3,10,14,20-pentone (1)
(1R,2R)-3-oxo-2-pentyl-cyclopentanehexanoic acid (1)
(1S,2S)-3-oxo-2-pentyl-cyclopentanebutanoic acid (1)
(22E)-3alpha,6beta,7beta-Trihydroxy-5beta-chol-22-en-24-oic Acid (1)
(25S)-5alpha-cholestan-3beta,4beta,6alpha,8beta,15alpha,16beta,26-heptol (1)
(2E,4E)-2,4-Octadien-1-ol (1)
(2R,2'S)-Isobuteine (1)
(2R,3R,4R)-2-Amino-4-hydroxy-3-methylpentanoic acid (1)
(2S,4S)-Pinnatanine (1)
(3E,5Z)-3,5-Octadien-1-ol (1)
(3S,5R,6R,7E)-3,5,6-Trihydroxy-7-megastigmen-9-one (1)
(4E,6E,d14:2) sphingosine (1)
(4E,8E,10E-d18:3)sphingosine (1)
(4E,8E,9Me-d19:2)sphingosine (1)
(4E,8E,d18:2) sphingosine (1)
(4S,8R)-8,9-Dihydroxy-p-menth-1(6)-en-2-one (1)
(5alpha,6beta,14alpha,20R,22R)-5,6,14,20,27-Pentahydroxy-1-oxowith-24-enolide (1)
(6E,8E,10R,12Z)-10-Hydroxy-3-oxooctadecatrienoic acid (1)
(6S)-dehydrovomifoliol (1)
(9R,13R)-1a,1b-dihomo-jasmonic acid (1)
(9S,13S)-1a,1b-dihomo-jasmonic acid (1)
(E)-10-Oxo-8-decenoic acid (1)
(E)-2-Butenyl-4-methyl-threonine (1)
(E)-2-O-Cinnamoyl-beta-D-glucopyranose (1)

Study type

Transcription profiling by array (2)
Antigen profiling (1)

Release Date

2021 (88)
2022 (82)
2023 (81)
2024 (74)
2025 (64)
2015 (53)
2020 (53)
2019 (43)
2018 (35)
2016 (35)
2013 (32)
2012 (32)
2017 (26)
2014 (25)
2011 (20)
2010 (10)
2026 (10)
2009 (6)
2008 (6)
2007 (2)
2005 (1)

Lab affiliation

Roswell Park Cancer Center Buffalo, NY, USA (2)
Department of Chemistry, Michigan State University, 578 S Shaw Lane, East Lansing, Michigan 48824, United States (1)
Ruhr University Bochum Applied Microbiology Universitaetsstrasse 150 44801 Bochum, Germany (1)
St. Jude Children's Research Hospital (1)
St. Jude Children’s Research Hospital (1)

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Preoperative stereotactic radiosurgery for patients with 1-4 brain metastases: A single-arm phase 2 trial outcome analysis (NCT03398694).

Not available

S-EPMC11398945 | biostudies-literature

Mechanical force promotes dimethylarginine dimethylaminohydrolase 1-mediated hydrolysis of the metabolite asymmetric dimethylarginine to enhance bone formation

Mechanical force is critical for the development and remodeling of bone. Here we report that mechanical force regulates the production of the metabolite asymmetric dimethylarginine (ADMA) via regulating the hydrolytic enzyme dimethylarginine dimethylaminohydrolase 1 (Ddah1) expression in osteobla...

2021-11-23 | MTBLS3725 | MetaboLights

Diagnosing Portal Hypertension with Noninvasive Subharmonic Pressure Estimates from a US Contrast Agent.

Not available

S-EPMC7771992 | biostudies-literature

Avid lysosomal acidification in fibroblasts of the Mediterranean mouse Mus spretus.

Not available

S-EPMC11839142 | biostudies-literature

Antibody-based methods for the measurement of α-synuclein concentration in human cerebrospinal fluid - method comparison and round robin study.

Not available

S-EPMC6587944 | biostudies-literature

Global colorectal cancer gene expression in rats

The rat models of colorectal cancer (CRC), such as the azoxymethane (AOM) cancer-inducing model, are important tools for researching cancer initiation pathways. However, there is limited understanding of the expression pathways of underlying normal rat colonic epithelium and how this relates to hum...

ORGANISM(S): Rattus norvegicus

2010-06-16 | E-GEOD-15184 | biostudies-arrayexpress

Walk-in clinic patient characteristics and utilization patterns in Ontario, Canada: a cross-sectional study.

Not available

S-EPMC10139081 | biostudies-literature

State Variability in Diagnosed Conditions for IDEA Part C Eligibility.

Not available

S-EPMC7177194 | biostudies-literature

Trajectories of Body Mass Index and Their Associations With Mortality Among Older Japanese: Do They Differ From Those of Western Populations?

Not available

S-EPMC4692978 | biostudies-literature

Gene expression and pathologic alterations in juvenile rainbow trout due to chronic dietary TCDD exposure.