Shen Chi C - OmicsDI

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Unknown (193)
Transcriptomics (37)
Genomics (30)
Proteomics (11)
Metabolomics (6)

Organisms

Mus musculus (36)
Homo sapiens (31)
Arabidopsis thaliana (3)
Saccharomyces cerevisiae (2)
uncultured bacterium (1)
Oryza sativa Japonica Group (1)
Rattus norvegicus (1)
Sus scrofa (1)
Drosophila melanogaster (1)

Repository

biostudies-arrayexpress (65)
pride (10)
MetaboLights (6)
EGA (2)
MassIVE (1)

Tissue

Brain (1)
Cell culture (1)
Cerebrospinal fluid (1)
Heart (1)
Kidney (1)
Leukocyte (1)
Liver (1)
Lung (1)
Primary cell (1)

Disease

Mitochondrial disease (1)

Technology Type

Mass Spectrometry (10)
Shotgun proteomics (8)
Mass spectrometry (6)
Bottom-up proteomics (1)
Data-dependent acquisition (1)
Top-down proteomics (1)

Instrument Platform

Illumina HiSeq 2000 (3)
Liquid Chromatography MS - negative - hilic (3)
Liquid Chromatography MS - negative - reverse phase (3)
Liquid Chromatography MS - positive - hilic (3)
Liquid Chromatography MS - positive - reverse phase (3)
Affymetrix GeneChip Scanner 3000 7G (1)
Illumina Genome Analyzer (1)
Illumina Genome Analyzer II (1)
Illumina NovaSeq 6000 (1)
Exactive Plus (1)

Publication Date

2013 (11)
2011 (11)
2014 (10)
2016 (8)
2015 (8)
2012 (8)
2025 (6)
2017 (6)
2010 (5)
2009 (1)
2007 (1)
2005 (1)
2020 (1)
2024 (1)
2022 (1)
2023 (1)
2021 (1)
2019 (1)

CHEBI ID

CHEBI:132983 (2)
CHEBI:15676 (2)
CHEBI:15724 (2)
CHEBI:16024 (2)
CHEBI:16040 (2)
CHEBI:16196 (2)
CHEBI:16347 (2)
CHEBI:16414 (2)
CHEBI:16467 (2)
CHEBI:166840 (2)
CHEBI:16737 (2)
CHEBI:16919 (2)
CHEBI:16977 (2)
CHEBI:17154 (2)
CHEBI:17203 (2)
CHEBI:17490 (2)
CHEBI:17562 (2)
CHEBI:17568 (2)
CHEBI:17587 (2)
CHEBI:17687 (2)
CHEBI:17748 (2)
CHEBI:17750 (2)
CHEBI:18089 (2)
CHEBI:20067 (2)
CHEBI:27480 (2)
CHEBI:28865 (2)
CHEBI:30746 (2)
CHEBI:30805 (2)
CHEBI:33135 (2)
CHEBI:41321 (2)

Metabolite Name

Betaine (3)
Cytidine (3)
L-Arginine (3)
L-Valine (3)
Pyrrolidine (3)
1-Methyladenosine (2)
2-Methylbutyroylcarnitine (2)
2-Methylguanosine (2)
2-Pyrrolidineacetic acid (2)
2-Pyrrolidinone (2)
4-Amino-2-methylenebutanoic acid (2)
Adenosine (2)
Aniline (2)
Cholesterol (2)
Choline (2)
Creatine (2)
Creatinine (2)
Cytosine (2)
Dioctyl phthalate (2)
Glycerophosphocholine (2)
Hypoxanthine (2)
Isonicotinic acid (2)
L-Alanine (2)
L-Carnitine (2)
L-Glutamine (2)
L-Lysine (2)
L-Palmitoylcarnitine (2)
L-Proline (2)
L-Tryptophan (2)
L-Tyrosine (2)

Study type

ChIP-seq (25)
Transcription profiling by array (18)
RNA-seq of coding RNA (7)
ChIP-chip by tiling array (4)
Methylation profiling by high throughput sequencing (3)
Methylation profiling by array (2)
Transcription profiling by tiling array (1)
ChIP-chip by array (1)
Transcription profiling by RT-PCR (1)
Comparative genomic hybridization by array (1)
Other (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (30)
2023 (24)
2022 (22)
2024 (21)
2016 (20)
2021 (20)
2013 (19)
2015 (15)
2020 (14)
2014 (13)
2011 (13)
2019 (13)
2012 (9)
2018 (9)
2010 (6)
2017 (4)
2026 (2)
2009 (1)
2007 (1)
2005 (1)
2008 (1)

Lab affiliation

Institutes of Biomedical Sciences and department of Chemistry, Fudan University, Shanghai, China (6)
Institute of Biomedical Science, Academia Sinica, Taiwan (1)
N523 Room, Institute of Molecular Biology, No. 128, Section 2, Academia Rd, Nangang District, Taipei City, 115 (1)
School of Medicine, College of Medicine, Fu Jen Catholic University (1)
The Hong Kong Polytechnic University (1)

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Impact of Positive Airway Pressure and Mask Leakage on Dry Eye and Glaucoma Risk in Obstructive Sleep Apnea: A Cross-Sectional Analysis.

Not available

S-EPMC12731221 | biostudies-literature

The Chi-Square Test of Distance Correlation.

Not available

S-EPMC9191842 | biostudies-literature

Organic anion-transporting polypeptide 1B3 as a dual reporter gene for fluorescence and magnetic resonance imaging.

Not available

S-EPMC5892727 | biostudies-literature

Metabolic Profiling of Synovial Fluid in Human Temporomandibular Joint Osteoarthritis

INTRODUCTION: Temporomandibular joint (TMJ) osteoarthritis (OA) is a common TMJ degenerative disease with an unclear mechanism. Synovial fluid (SF), an important component of TMJ, contains various proteins and metabolites that may directly contribute to OA. The present study aime...

2025-05-27 | MTBLS9662 | MetaboLights

Metabolic Profiling of Synovial Fluid in Human Temporomandibular Joint Osteoarthritis

2025-05-27 | MTBLS9665 | MetaboLights

BS69/ZMYND11 C-Terminal Domains Bind and Inhibit EBNA2.

Not available

S-EPMC4742278 | biostudies-literature

Tai Chi Improves Brain Functional Connectivity and Plasma Lysophosphatidylcholines in Postmenopausal Women With Knee Osteoarthritis: An Exploratory Pilot Study.

Not available

S-EPMC8761802 | biostudies-literature

Tai Chi exercise reduces circulating levels of inflammatory oxylipins in postmenopausal women with knee osteoarthritis: results from a pilot study.

Not available

S-EPMC10466388 | biostudies-literature

c-Myc Acts as a Competing Endogenous RNA to Sponge miR-34a, in the Upregulation of CD44, in Urothelial Carcinoma.

Not available

S-EPMC6826510 | biostudies-literature

Genome-Wide binding sites of two MADS-domain transcription factors SOC1 and SVP in Arabidopsis during the floral transition

The floral transition in Arabidopsis is tightly controlled by complex genetic regulatory networks in response to endogenous and environmental flowering signals. SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1 (SOC1) and SHORT VEGETATIVE PHASE (SVP), two key MADS-domain transcription factors, perceive the...

ORGANISM(S): Arabidopsis thaliana

2012-02-01 | E-GEOD-33297 | biostudies-arrayexpress

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