Shen Ke K - OmicsDI

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Unknown (351)
Metabolomics (8)
Proteomics (5)
Transcriptomics (3)
Genomics (1)

Organisms

Mus musculus (5)
Homo sapiens (3)
Mycobacterium tuberculosis SP7 (1)
Mycobacterium tuberculosis SP10 (1)
Mycobacterium tuberculosis SP13 (1)
Mycobacterium tuberculosis SP22 (1)
Chlamydomonas reinhardtii (1)
Enterococcus mundtii CRL35 (1)
Oncorhynchus tshawytscha (1)
Pseudomonas canadensis (1)
Pseudomonas aeruginosa PAO1H2O (1)
Human alphaherpesvirus 1 strain 17 (1)
Mycobacterium tuberculosis SP1 (1)
Marchantia polymorpha subsp. ruderalis (1)
Methylocystis sp. (1)
Exiguobacterium sp. SH31 (1)
Palaemonetes sp. common grass shrimp associated circular virus (1)
Amaranthus tricolor (1)
Spirochaeta sp. ELBA (1)
Clavibacter nebraskensis NCPPB 2581 (1)
Porites pukoensis (1)
Porphyromonas gingivalis (1)
Leishmania tarentolae (1)
Porphyromonas gingivalis W83 (1)
Human betaherpesvirus 5 (1)
Bothrops insularis (1)
Bothrops jararaca (1)
Bothrops jararacussu (1)
Bothrops cotiara (1)
Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 (1)

Repository

MetaboLights (8)
biostudies-arrayexpress (3)
iProX (3)
EGA (1)
MassIVE (1)
pride (1)

Tissue

HeLa cell (1)

Technology Type

Mass spectrometry (6)
Mass spectrometry assay (2)
Gel-based experiment (1)
Mass Spectrometry (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (5)
HiSeq X Ten (1)
Orbitrap Elite mass spectrometer(Thermo) (1)
Liquid Chromatography MS - alternating – hilic (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2023 (9)
2024 (2)
2021 (1)
2014 (1)
2009 (1)
2025 (1)
2026 (1)

CHEBI ID

CHEBI:28865 (4)
CHEBI:16359 (4)
CHEBI:35038 (3)
CHEBI:195271 (2)
CHEBI:143757 (2)
CHEBI:143745 (2)
CHEBI:182784 (2)
CHEBI:139138 (2)
CHEBI:73858 (2)
CHEBI:75304 (2)
CHEBI:16551 (2)
CHEBI:34494 (2)
CHEBI:27997 (2)
CHEBI:34687 (2)
CHEBI:116314 (2)
CHEBI:16870 (2)
CHEBI:64489 (2)
CHEBI:64563 (2)
CHEBI:80774 (2)
CHEBI:173703 (2)
CHEBI:75342 (2)
CHEBI:73024 (2)
CHEBI:16811 (2)
CHEBI:73054 (2)
CHEBI:55328 (2)
CHEBI:28716 (2)
CHEBI:27781 (2)
CHEBI:27432 (2)
CHEBI:16235 (2)
CHEBI:16196 (2)

Metabolite Name

Tris(2-butoxyethyl) phosphate (3)
Cholic acid (3)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
Alpha-linolenic acid|linolenic acid|(9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (2)
Lyso-PC(16:0) (2)
Dibutyl phthalate (DBP) (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
Monoolein (2)
Elaidic acid (2)
Taurocholic acid (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
Butyrylcarnitine (2)
9(10)-EpOME (2)
Alpha,alpha-Trehalose (2)
Taurocholic acid (2)
Guanine (2)
16-Hydroxyhexadecanoic acid (2)
Dodecanedioic acid (2)
Guanosine (2)
NCGC00168953-02_C47H76O17_(3beta,5xi,9xi,22beta)-22,24-Dihydroxyolean-12-en-3-yl 6-deoxy-alpha-L-mannopyranosyl-(1->2)-alpha-L-arabinopyranosyl-(1->2)-beta-D-glucopyranosiduronic acid (1)
Sodium taurochenodeoxycholate (1)
(R)-4-((3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-3,7,12-trihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
(R)-4-((3R,4R,5S,8S,9S,10R,13R,14S,17R)-3,4-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
Lyso PC (22:6) (1)
Methyl (3R,4R,5R)-5-[(2R,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(E)-3-phenylprop-2-enoyl]oxyoxan-2-yl]oxy-3,4-dihydroxycyclohexene-1-carboxylate (1)
Propanoic acid, 3,3'-thiobis-, didodecyl ester (1)
2-((R)-4-((3R,5S,7S,8R,9S,10S,13R,14S,17R)-3,7-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanamido)ethane-1-sulfonic acid (1)
LU052302 Acetyl tributyl citrate|tributyl 2-acetyloxypropane-1,2,3-tricarboxylate (1)

Study type

Transcription profiling by array (2)
RNA-seq of coding RNA (1)

Release Date

2018 (53)
2022 (33)
2021 (30)
2020 (30)
2024 (29)
2023 (26)
2016 (26)
2025 (25)
2017 (23)
2015 (22)
2019 (18)
2014 (12)
2013 (8)
2011 (6)
2012 (5)
2026 (3)
2009 (2)
2010 (2)
2008 (1)

Lab affiliation

Medical Research Council - Laboratory of molecular biology (1)

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Phase II Study of Hemithoracic Intensity-Modulated Pleural Radiation Therapy (IMPRINT) As Part of Lung-Sparing Multimodality Therapy in Patients With Malignant Pleural Mesothelioma.

Not available

S-EPMC5019761 | biostudies-literature

Deciphering the phase transition-induced ultrahigh piezoresponse in (K,Na)NbO₃-based piezoceramics.

Not available

S-EPMC9197837 | biostudies-literature

RNA-seq data of HTR1A antagonist WAY-100635 maleate treated GT1-7 cells against untreated control

GT1-7 cells were treated with 100 μg/mL HTR1A antagonist WAY-100635 maleate for 6 h and harvested for RNA-seq. This study aimed to investigate the expression of gonadotropin-releasing hormone and the differential expressed genes affected by HTR1A inhibition.

ORGANISM(S): Mus musculus

2021-03-11 | E-MTAB-10171 | biostudies-arrayexpress

Inflammatory osteolysis is regulated by site-specific ISGylation of the scaffold protein NEMO.

Not available

S-EPMC7145425 | biostudies-literature

Rural-Urban Disparities In All-Cause Mortality Among Low-Income Medicare Beneficiaries, 2004-17.

Not available

S-EPMC8168613 | biostudies-literature

Prognostic Significance of the Albumin Platelet Product for Mortality Risk in Pulmonary Embolism: A Retrospective Analysis Based on the MIMIC-IV Database.

Not available

S-EPMC12673038 | biostudies-literature

Integrated analysis of single-cell and bulk RNA-sequencing reveals the poor prognostic value of ABCA1 in gastric adenocarcinoma.