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MetabolomicsMethionine Intervention Induces PD-L1 Expression to Enhance the Immune Checkpoint Therapy Response in MTAP-deleted Osteosarcoma
Osteosarcoma (OS), a malignant bone tumor with limited treatment options, exhibits low sensitivity to immune checkpoint therapy (ICT). Through genomics and transcriptomics analyses, we have identified a subgroup of OS with methylthioadenosine phosphorylase (MTAP) deletion, which contributes to ICT r...
2026-06-09 | MTBLS11985 | MetaboLights
TranscriptomicsTranscriptional profiling by high throughput sequencing of Panax ginseng C.A. Meyer leaf and stem transcriptomes during the leaf-expansion period.
In order to research the ginseng leaf-stem gene expression profiles of and dig out its function genes in the leaf-expansion period, the transcriptomic sequencing technology was set up the first time for five years the transcription of the Panax ginseng leaf-stem in the leaf-expansion period.
ORGANISM(S): Panax ginseng 
2012-07-31 | E-MTAB-937 | biostudies-arrayexpress
ProteomicsEffects of arbuscular mycorrhizal fungi on Pteris cretica L var. nervosa fronds antimony enrichment, morphology and proteome changes during antimony phytoremediation
Pteris cretica L var. nervosa is one of the dominent fern species at antimony mining area where arbuscular mycorrhizal fungi can be found as a symbiosis. The effect of AMF on fern exposed to long-term excessive Sb was pooly understood. The project applied this fern co-cultivting with or withour AMF ...
ORGANISM(S): Pteris cretica var. nervosa 
2024-01-19 | PXD012678 | Pride
Arbuscular mycorrhizal fungi Antimony phytoremediation Pteris cretica l var. nervosa Long-term exposure Fronds proteomic identification 
UnknownDifferential gene expression in Lin-/VEGF-R2+ bone marrow-derived endothelial progenitor cells isolated from diabetic mice.
Not available
S-EPMC3926942 | biostudies-literature
TranscriptomicsA panel of CpG methylation patterns distinguishes human embryonic stem cells and induced pluripotent stem cells
Genome wide DNA methylation profiling of normal human embryonic stem cells, induced pluripotent stem cells, and somatic cells. The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in 5 normal hESCs, 15 hiPSCs (vect...
ORGANISM(S): Homo sapiens 
2014-01-01 | E-GEOD-42043 | biostudies-arrayexpress
TranscriptomicsTranscript profiles of the flowering period Panax ginseng C.A. Meyer root and analysis the gene function
Panax ginseng C.A. Meyer is one of the most popular medicinal herbs. In order to research the genes that related to the flowering period of ginseng, and find out the antifungal proteins and transcription factors that combat various biotic and abiotic stress, a cDNA sample was prepared from the flowe...
ORGANISM(S): Panax ginseng 
2014-07-25 | E-MTAB-1239 | biostudies-arrayexpress
TranscriptomicsDe novo sequencing and analysis of the Panax ginseng transcriptome in the leaf-expansion period
In order to analyze the transcriptome of ginseng root during leaf-expansion period and discover the genes during development, a cDNA sample was prepared from the leaf-expansion period of ginseng root and sequenced using the Illumina sequencing platform.The transcriptomic sequencing technology was se...
ORGANISM(S): Panax ginseng 
2013-06-15 | E-MTAB-974 | biostudies-arrayexpress
TranscriptomicsLIN28 eRIP in Differentiating hESCs
Excluded-volume-effect-optimized RNA-IP (eRIP) of LIN28-associated mRNAs in H1 hESCs. H1s are induced to differentiate into either trophoblast (TE) or neural (N) lineages, and LIN28 eRIP performed at 0hr (Undifferentiated), 12hr TE, 24hr TE and 24hr N
ORGANISM(S): Homo sapiens 
2014-07-21 | E-MTAB-1652 | biostudies-arrayexpress
ProteomicsQuantitative Proteomics Reveals Antibiotics Resistance Function of Outer Membrane Proteins in Aeromonas hydrophila
Each colony of A. hydrophila and the OXY-R strain were incubated in 5 mL LB medium overnight, and then diluted in 100 mL fresh LB medium at a ratio of 1:100 and subsequently cultured until the optical density at 600 nm (OD600) reached 1.0. The cultures were harvested via centrifuging for 20 min at 1...
ORGANISM(S): Aeromonas hydrophila subsp. hydrophila ATCC 7966 
2018-11-23 | PXD009622 | Pride
Aeromonas hydrophila， outer membrane proteins， antibiotics resistance Lc-ms/ms 
UnknownOrganic anion-transporting polypeptide 1B3 as a dual reporter gene for fluorescence and magnetic resonance imaging.
Not available
S-EPMC5892727 | biostudies-literature
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