Sort   by:  
 Page size 
GenomicsData Committee for EMSEQ project
Data Access Committee EGAC00001000265
EGAC00001000265 | EGA
TranscriptomicsTranscriptome-wide miR-155 binding map reveals widespread non-canonical microRNA targeting [mRNA expression data]
microRNAs (miRNAs) are essential components of gene regulation, but identification of miRNA targets remains a major challenge. Most target prediction and discovery relies on perfect complementarity of the miRNA seed to the 3’ untranslated region (UTR). However, it is unclear to what extent miRNAs ...
ORGANISM(S): Mus musculus 
2012-11-09 | E-GEOD-41241 | biostudies-arrayexpress
TranscriptomicsTranscriptome-wide miR-155 binding map reveals widespread non-canonical microRNA targeting [CLIP-seq data]
microRNAs (miRNAs) are essential components of gene regulation, but identification of miRNA targets remains a major challenge. Most target prediction and discovery relies on perfect complementarity of the miRNA seed to the 3’ untranslated region (UTR). However, it is unclear to what extent miRNAs ...
ORGANISM(S): Mus musculus 
2012-11-09 | E-GEOD-41285 | biostudies-arrayexpress
GenomicsGenome binding profile of TFIIH helicases XPB and XPD in HT1080 cells
The conserved TFIIH helicases XPB and XPD play key roles in transcription initiation and DNA repair. To investigate the functions of these helicases on a genome-wide scale, we performed ChIP-seq of endogenous XPB and XPD in the HT1080 human fibrosarcoma cell line. 2 ChIP samples and 1 unenriched inp...
ORGANISM(S): Homo sapiens 
2014-02-18 | E-GEOD-44849 | biostudies-arrayexpress
Genomicsena-DATASET-EMSEQ-23-07-2016-16:45:57:226-24 - samples
This dataset includes whole genome sequence information for three individuals (Mother, Father and Newborn) used in this study. Genomes were sequenced using Illumina HiSeq technology. Files included are fastq files in paired read format.
EGAD00001002257 | EGA
GenomicsGenome-wide prediction of human embryos
BACKGROUND: Preimplantation genetic diagnosis (PGD) enables profiling of embryos for genetic disorders prior to implantation. The majority of PGD testing is restricted in the scope of variants assayed or by the availability of extended family members. While recent advances in single cell sequencing ...
EGAS00001001020 | EGA
GenomicsNHLBI GO-ESP: Lung Cohorts Exome Sequencing Project (Cystic Fibrosis): Genetic modifiers of Pseudomonas aeruginosa (Pa) lung infection acquisition in cystic fibrosis

The NHLBI "Grand Opportunity" Exome Sequencing Project (GO-ESP), a signature project of the NHLBI Recovery Act investment, was designed to identify genetic variants in coding regions (exons) of the human genome (the "exome") that are associated with heart, lung and blood diseases. These a...

phs000254.v1.p1 | EGA
GenomicsGenetic Analysis of Limb Malformation Disorders: Freeman Sheldon Syndrome Exome Sequencing Study (LMD-FSS)

The overall goal of this project is to investigate the etiology and pathogenesis of malformations (i.e., birth defects) of the limb, concentrating on abnormalities of limb patterning such as limb deficiency/duplications and multiple congenital contractures.

The exome sequences of four ...

phs000204.v1.p1 | EGA
GenomicsNon-invasive whole genome sequencing of a human fetus

The overall purpose of this study was to demonstrate the feasibility of producing haplotype-phased whole genome sequence data from a fetus using free fetal DNA isolated from maternal plasma collected during the first half of gestation.

phs000500.v1.p1 | EGA
GenomicsGenetic Analysis of Limb Malformation Disorders: Miller Syndrome Sequencing Study (LMD-MS)

The overall goal of this project is to investigate the etiology and pathogenesis of malformations (i.e., birth defects) of the limb, concentrating on abnormalities of limb patterning such as limb deficiency/duplications and multiple congenital contractures.

The exome sequences of two s...

phs000244.v1.p1 | EGA
Sort   by:  
 Page size