Sort   by:  
 Page size 
TranscriptomicsC1 evolved adaptive clones M1-M5
Chemostat evolution experiment C1 under glucose-limited condition at 30C. Gene Expression profiles of adaptive clones M1-M5 in evolved conditions compared with original parents. An all pairs experiment design type is where all labeled extracts are compared to every other labeled extract. Genotype: ...
ORGANISM(S): Saccharomyces cerevisiae 
2008-08-20 | E-GEOD-11071 | biostudies-arrayexpress
TranscriptomicsXylose utilization timecourse
We have identified a novel xylose-utilization phenotype controlled by a single gene, and we sought to characterize how both the presence and absence of xylose in the presence or absence of the trait affected the S. cerevisiae transcriptional program over time. To do so, we measured global steady st...
ORGANISM(S): Saccharomyces cerevisiae 
2010-04-09 | E-GEOD-19116 | biostudies-arrayexpress
TranscriptomicsAnnotating Low Abundance and Transient RNAs in Yeast using Ultra High-throughput Sequencing
Annotating Low Abundance and Transient RNAs in Yeast using Tiling Microarrays and Ultra High-throughput Sequencing Reveals New Transcripts that are not Conserved Across Closely Related Yeast Species A complete description of the transcriptome of an organism is crucial for a comprehensive understand...
ORGANISM(S): Saccharomyces cerevisiae 
2008-12-18 | E-GEOD-11801 | biostudies-arrayexpress
GenomicsIdentification of cell cycle-regulated genes periodically expressed in U2OS cells and their regulation by FOXM1 and E2F transcription factors [ChIP-seq]
We report the genome wide DNA binding patterns of wild type FOXM1 in asynchronous HeLa cells using chromatin precipitation followed by high-throughput sequencing (ChIP-seq). We find that FOXM1 is bound to the promoter of a number of cell cycle genes including PLK, AURKB, and CCNB1. FOXM1 ChIP-seq i...
ORGANISM(S): Homo sapiens 
2013-11-06 | E-GEOD-52098 | biostudies-arrayexpress
TranscriptomicsIdentification of cell cycle-regulated genes periodically expressed in U2OS cells and their regulation by FOXM1 and E2F transcription factors
We identified the cell cycle-regulated mRNA transcripts genome-wide in the osteosarcoma derived U2OS cell line. This resulted in 2,140 transcripts mapping to 1,871 unique cell cycle-regulated genes that show periodic oscillations across multiple synchronous cell cycles. We identified genomic loci ...
ORGANISM(S): Homo sapiens 
2013-10-11 | E-GEOD-50988 | biostudies-arrayexpress
GenomicsIdentification of cell cycle-regulated genes periodically expressed in U2OS cells and their regulation by FOXM1 and E2F transcription factors
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Homo sapiens 
2013-11-06 | E-GEOD-52100 | biostudies-arrayexpress
Sort   by:  
 Page size