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TranscriptomicsDirected shotgun proteomics guided by RNA-Seq identifies a complete expressed prokaryotic proteome
Prokaryotes are, due to their moderate complexity, particularly amenable to the comprehensive identification of the protein repertoire expressed under different conditions. We applied a generic strategy to identify a complete expressed prokaryotic proteome, which is based on the analysis of RNA and ...
ORGANISM(S): Bartonella henselae 
2013-04-23 | E-GEOD-44564 | biostudies-arrayexpress
TranscriptomicsDirected shotgun proteomics guided by RNA-Seq identifies a complete expressed prokaryotic proteome
Prokaryotes are, due to their moderate complexity, particularly amenable to the comprehensive identification of the protein repertoire expressed under different conditions. We applied a generic strategy to identify a complete expressed prokaryotic proteome, which is based on the analysis of RNA and ...
ORGANISM(S): Bartonella henselae 
2013-04-23 | GSE44564 | GEO
UnknownQuantitative shotgun proteome analysis by direct infusion.
Not available
S-EPMC8009190 | biostudies-literature
ProteomicsA label-free shotgun proteomics analysis of macadamia nut
In this study, we present a first proteomic overview of macadamia nut using a label-free shotgun proteomic approach and prediction of their proteins with potential allergenic activity and cross-reactivity via an in silico analysis. The defense response proteins were the most abundant group of protei...
ORGANISM(S): Macadamia 
2020-01-13 | PXD015364 | Pride
Macadamia nut  label-free shotgun proteomics  in silico analysis  allergenicity  cross-reactivity 
UnknownLabel-Free Quantification from Direct Infusion Shotgun Proteome Analysis (DISPA-LFQ) with CsoDIAq Software.
Not available
S-EPMC9850400 | biostudies-literature
UnknownRapid Targeted Quantitation of Protein Overexpression with Direct Infusion Shotgun Proteome Analysis (DISPA-PRM).
Not available
S-EPMC9007395 | biostudies-literature
TranscriptomicsTowards a reference human platelet transcriptome: evaluation of inter-individual correlations and of its relationship with a platelet proteome
For the anucleate platelet it has been unclear how well platelet transcriptomes correlate among different donors or across different RNA profiling platforms, and what the transcriptomes’ relationship is with the platelet proteome. We generated RNA-seq pro-files of the long R...
ORGANISM(S): Homo sapiens 
2015-01-20 | E-GEOD-50858 | biostudies-arrayexpress
UnknownCiticoline Triggers Proteome Remodeling and Proteostatic Adaptation: Evidence from Shotgun Proteomics.
Not available
S-EPMC12845156 | biostudies-literature
UnknownComparative shotgun proteomic analysis of Clostridium acetobutylicum from butanol fermentation using glucose and xylose.
Not available
S-EPMC3212805 | biostudies-literature
ProteomicsShotgun analysis of serum proteome on Schistosoma mansoni infection
This project is a Shotgun analysis of serum proteome on Schistosoma mansoni infection
ORGANISM(S): Mus musculus (Mouse) 
2022-08-18 | PXD031974 | Pride
Schistosoma mansoni Shotgun Serum proteome 
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