Sierra C C - OmicsDI

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Unknown (1714)
Proteomics (116)
Transcriptomics (50)
Genomics (14)
Metabolomics (7)

Organisms

Aerococcus urinae NBRC 15544 = CCUG 36881 (115)
Alteromonadales (115)
Bacteria (115)
Canis lupus familiaris (115)
Carya cathayensis (115)
Ectopseudomonas oleovorans CECT 5344 (115)
Ensifer adhaerens (115)
Enterococcus faecalis (115)
Globicatella sanguinis (115)
Halictus scabiosae (115)
Histomonas meleagridis (115)
Human immunodeficiency virus 1 (115)
Mesocricetus auratus (115)
Methylohalobius crimeensis 10Ki (115)
Homo sapiens (23)
Arabidopsis thaliana (12)
Mus musculus (5)
Pinus pinaster (4)
Rana sierrae (1)
Aquilegia formosa (1)
Solanum phureja (1)
Aspergillus fumigatus (1)
Medicago truncatula (1)
Citrus sinensis (1)
Escherichia coli (1)
Gallus gallus (1)
Escherichia coli str. K-12 substr. MG1655 (1)
Danio rerio (1)
Triticum dicoccoides (1)
Triticum aestivum (1)

Organisms

Neotamias alpinus (1)
Aquila chrysaetos canadensis (1)
Triticum dicoccoides (1)
Zea mays (1)
Homo sapiens (1)

Repository

pride (115)
biostudies-arrayexpress (52)
ENA (8)
MetaboLights (6)
EGA (3)
geo (1)
GNPS (1)
MassIVE (1)

Tissue

B cell (3)
Cell culture (2)
Peripheral blood mononuclear cell (2)
Embryonic stem cell (1)
Epithelial cell (1)
HeLa cell (1)
Hippocampus (1)
Liver (1)
Macrophage (1)
Macrophage cell line (1)
Meniscus (1)
Neutrophil (1)
Permanent cell line cell (1)
Sac (1)
Stem cell (1)
Tooth enamel (1)
Venom sac (1)

Disease

Breast cancer (4)
Acute leukemia (3)
Bacterial gastritis (1)
Brain cancer (1)
COVID-19 (1)
Cardiovascular system disease (1)
Cystic fibrosis (1)
Influenza (1)
Lyme disease (1)
Lymphoma (1)
Myelodysplastic syndrome (1)
Myeloid leukemia (1)
Neuroblastoma (1)
Parkinson's disease (1)
Pulmonary hypertension (1)
Stomach cancer (1)

Technology Type

Mass Spectrometry (115)
Shotgun proteomics (56)
Data-dependent acquisition (21)
Bottom-up proteomics (20)
Top-down proteomics (12)
Mass spectrometry (5)
HDMSE (4)
Affinity purification coupled with mass spectrometry proteomics (3)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Infinium Omni2.5M (1)
Mass spectrometry assay (1)
Affinity proteomics (1)
Data-independent acquisition (1)
Glycoproteomics (1)
MSE (1)
SWATH MS (1)

Instrument Platform

Liquid Chromatography MS - positive - hilic (3)
Liquid Chromatography MS - negative - hilic (2)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 2000 (1)
NextSeq 500 (1)
Q Exactive (1)
Orbitrap Eclipse (1)
Orbitrap Fusion Lumos (1)
Liquid Chromatography MS - - reverse-phase (1)
Q Exactive HF (Thermo Scientific) (1)
Liquid Chromatography MS - (1)

Publication Date

2025 (37)
2023 (24)
2024 (20)
2021 (16)
2022 (12)
2026 (11)
2013 (9)
2012 (8)
2008 (7)
2015 (6)
2016 (5)
2011 (5)
2010 (5)
2020 (4)
2019 (2)
2009 (2)
2014 (1)
2007 (1)
2018 (1)

CHEBI ID

CHEBI:16610 (4)
CHEBI:17858 (3)
CHEBI:16264 (2)
CHEBI:16927 (2)
CHEBI:16344 (2)
CHEBI:4170 (2)
CHEBI:16708 (2)
CHEBI:16750 (2)
CHEBI:17268 (2)
CHEBI:16335 (2)
CHEBI:18107 (2)
CHEBI:16027 (2)
CHEBI:17284 (1)
CHEBI:125405 (1)
CHEBI:85856 (1)
CHEBI:60426 (1)
CHEBI:16034 (1)
CHEBI:37240 (1)
CHEBI:83775 (1)
CHEBI:27869 (1)
CHEBI:16142 (1)
CHEBI:46229 (1)
CHEBI:8064 (1)
CHEBI:47904 (1)
CHEBI:17585 (1)
CHEBI:17293 (1)
CHEBI:35425 (1)
CHEBI:60568 (1)
CHEBI:58703 (1)
CHEBI:16001 (1)

Metabolite Name

N-acetyl-D-mannosamine 6-phosphate (1)
3-keto-L-gulonic acid (1)
1,3-bisphospho-D-glyceric acid (1)
CDP-1,2-dioleoyl-sn-glycerol (1)
Dioleoyl phosphatidylglycerol (1)
1,2-dioleoyl-sn-glycerol-3-phosphate (1)
4-acetamidobutanal (1)
1,2-dioleoyl-sn-glycero-3-phospho-L-serine (1)
Dioleoyl phosphatidylethanolamine (1)
UDP-alpha-D-Glucose (1)
Taurochenodeoxycholic acid (1)
3-hydroxybutanoic acid (1)
Gulonic acid (1)
Chloroacetic acid (1)
Fructose 1,6-bisphosphate (1)
5,10-Methenyltetrahydrofolic acid (1)
Adenosine monophosphate (1)
Myoinositol (1)
Glucose-6-phosphate (1)
Deoxyuridine triphosphate (1)
5-Methyltetrahydrofolic acid (1)
3-Sulfinoalanine (1)
CDP-Ethanolamine (1)
Trans-3-Hydroxycotinine glucuronide (1)
Pantetheine 4'-phosphate (1)
Questiomycin A (1)
7-Aminomethyl-7-carbaguanine (1)
Topotecan (1)
Gamma-Glutamylcysteine (1)
S-Nitrosoglutathione (1)

First Public Date

2022 (3)
2014 (3)
2025 (1)
2023 (1)

Study type

Transcription profiling by array (32)
RNA-seq of coding RNA (4)
Comparative genomic hybridization by array (3)
Unknown experiment type (2)
Methylation profiling by array (2)
Methylation profiling by high throughput sequencing (2)
Transcription profiling by SAGE (1)
ChIP-chip by tiling array (1)
Transcription profiling by tiling array (1)
Single nucleus RNA sequencing (1)
DNA-seq (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (248)
2025 (208)
2024 (203)
2021 (189)
2023 (174)
2020 (131)
2019 (102)
2018 (101)
2016 (84)
2017 (69)
2015 (56)
2014 (41)
2012 (32)
2013 (30)
2026 (29)
2011 (19)
2010 (14)
2008 (10)
2009 (5)
2007 (5)
2005 (5)
2006 (4)
2004 (3)
2003 (1)
2002 (1)
2000 (1)
1998 (1)

Lab affiliation

University of Victoria (44)
iBET – Instituto de Biologia Experimental e Tecnológica, Av. da República, Oeiras, 2780-157, Portugal (14)
Associate Professor, University of Washington (3)
Indiana University School of Medicine (2)
Kobilka Institute of Innovative Drug Discovery, School ofMedicine, The Chinese University of Hong Kong, Shenzhen, China, 518172 (2)
University of Dundee (2)
University of Edinburgh, Institute of Genetics and Molecular Medicine, Edinburgh, Scotland, United Kingdom, EH4 2XR (2)
University of Geneva, Department of Microbiology and Molecular Medicine (2)
Chemical Proteomics, Division of Chemistry I, Department of Medical Biochemistry and Biophysics Karolinska Institutet, Stockholm, Sweden (1)
Columbia University, Department of Biochemistry and Molecular Biophysics, USA (1)
Department of Biochemistry and Molecular Biology, Center for Mechanical Excitability, Institute for Biophysical Dynamics, Prizker School for Molecular Engineering, The University of Chicago, Chicago, Illinois, USA (1)
Department of Biochemistry and Molecular Biology, University of Chicago (1)
Department of Chemistry and Biochemistry Montana State University (1)
Department of Developmental and Cell Biology, University of California, Irvine, Irvine, CA 92697, USA. (1)
Department of Experimental Medical Science, Lund University, SE-221 84 Lund, Sweden Lund Institute of Advanced Neutron and X-ray Science (LINXS), SE-221 84 Lund, Sweden (1)
Department of Medicinal Chemistry, University of Washington, Seattle, WA 98195, USA (1)
Department of Medicine, UCSD (1)
Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Box 280, S-171 77 Stockholm, Sweden. (1)
Department of Molecular Biology Umeå University SE-901 87 Umeå Sweden (1)
Department of Physics, Chemistry and Biology, Linköping University, Linköping, Sweden. (1)
Department of Physiology & Pharmacology, University of Calgary (1)
Departmentof Biochemistry & Structural Biology Lund University, Sweden (1)
Division of Biochemistry and Structural Biology, Department of Chemistry, Lund University, SE-22362, Lund, Sweden (1)
Division of Molecular Hematology, Department of Laboratory Medicine, Lund Stem Cell Center, Faculty of Medicine, Lund University, Lund, Sweden (1)
Edinburgh Cancer Research Centre, Cell Signalling Unit, University of Edinburgh (1)
Faculty of Medicine, Platform of services, Protein expression and purification, University of Geneva, 1211 Geneva, Switzerland (1)
Fundacion Instituto de Investigaciones Sanitarias de Santiago de Compostela (1)
Helmholtz International Lab, State Key Laboratory of Microbial Technology, Shandong University (1)
Hospital Clinic Barcelona (1)
Hospital Clinic Barcelona, Spain (1)

1901 Results

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