Simpson K K - OmicsDI

Show results for

Unknown (2169)
Proteomics (50)
Genomics (46)
Transcriptomics (39)
Metabolomics (9)
Models (2)
Genomic (1)
Other (1)

Organisms

Homo sapiens (98)
Mus musculus (17)
Arabidopsis thaliana (4)
Clostridium autoethanogenum (4)
Rattus norvegicus (3)
Bos taurus (2)
Saccharomyces cerevisiae (2)
Nannospalax galili (1)
Mycobacterium tuberculosis (1)
Heterocephalus glaber (1)
Bacteria (1)
Canis lupus familiaris (1)
Drosophila melanogaster (1)
Pseudomonas aeruginosa PA14 (1)
Pseudomonas putida KT2440 (1)
Treponema denticola ATCC 35405 (1)
human gut metagenome (1)

Organisms

Orchestia grillus (1)
Mus musculus (1)

Repository

pride (46)
biostudies-arrayexpress (43)
EGA (38)
MetaboLights (9)
ENA (4)
BioModels (2)
MassIVE (2)
dbGaP (1)
GPMDB (1)
jPOST (1)
PanoramaPublic (1)

Tissue

Cell culture (18)
Malignant cell (4)
Prokaryotic cell (4)
Blood plasma (3)
Epithelial cell (3)
Stromal cell (3)
Subcutaneous preadipocyte (3)
Blood (2)
Bone marrow (2)
Brain (2)
Feces (2)
Fibroblast (2)
HeLa cell (2)
Kidney (2)
Liver (2)
Monocyte (2)
Permanent cell line cell (2)
Primary cell (2)
Bile (1)
Bile duct (1)
Blood cell (1)
Blood serum (1)
Blood-lymph (1)
Colon (1)
Endothelial cell (1)
Glial cell (1)
Hippocampal pyramidal layer (1)
Leukocyte (1)
Lung (1)
Lymph node (1)

Disease

Simpson-Golabi-Behmel syndrome type 1 (7)
Melanoma (5)
Acute leukemia (4)
Botulism (2)
Steatosis (1)
Invasive lobular carcinoma (1)
Not Available (1)
Adult respiratory distress syndrome (1)
Brain cancer (1)
Breast cancer (1)
Childhood extraosseous osteosarcoma (1)
Cholangiocarcinoma (1)
Chronic bronchitis (1)
Colon cancer (1)
Connective tissue disease (1)
Disease free (1)
Embryonal rhabdomyosarcoma (1)
Epilepsy with generalized tonic-clonic seizures (1)
Fibrosarcoma (1)
Head and neck cancer (1)
Lung carcinoma (1)
Lymphosarcoma (1)
Malignant mesothelioma (1)
Neuroblastoma (1)
Pancreatic cancer (1)
Peripheral primitive neuroectodermal tumor (1)
Prostate adenocarcinoma (1)
Renal Wilms' tumor (1)
Retinoblastoma (1)
Stomach cancer (1)

Technology Type

Mass Spectrometry (46)
Shotgun proteomics (24)
Bottom-up proteomics (14)
Mass spectrometry (8)
Data-dependent acquisition (8)
Affinity purification coupled with mass spectrometry proteomics (5)
SWATH MS (3)
Gel-based experiment (2)
Illumina HiSeq 2500 (1)
NMR spectroscopy (1)
Affinity proteomics (1)
All-ion fragmentation (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)
SomaScan affinity proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (3)
Illumina MiSeq (2)
Exactive (Thermo Scientific) (2)
Liquid Chromatography MS - positive - reverse phase (2)
10X Genomics Chromium (1)
Axon Instruments GenePix 4000B scanner (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2000 (1)
Instrument (1)
Orbitrap Eclipse (1)
Orbitrap Fusion Lumos (1)
Bruker (1)
GC-TOF-MS (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - positive - hilic (1)
LTQ (1)

Publication Date

2024 (10)
2025 (10)
2013 (8)
2020 (8)
2026 (7)
2022 (7)
2021 (6)
2018 (6)
2017 (5)
2016 (5)
2008 (5)
2019 (5)
2015 (4)
2014 (4)
2012 (3)
2011 (3)
2010 (3)
2023 (3)
2007 (1)
2006 (1)

CHEBI ID

CHEBI:16449 (6)
CHEBI:16811 (6)
CHEBI:22660 (6)
CHEBI:25017 (6)
CHEBI:25094 (6)
CHEBI:27266 (6)
CHEBI:28044 (6)
CHEBI:16335 (5)
CHEBI:16865 (5)
CHEBI:17754 (5)
CHEBI:17822 (5)
CHEBI:18186 (5)
CHEBI:18257 (5)
CHEBI:24898 (5)
CHEBI:26986 (5)
CHEBI:27897 (5)
CHEBI:28300 (5)
CHEBI:15428 (4)
CHEBI:15756 (4)
CHEBI:15760 (4)
CHEBI:16000 (4)
CHEBI:16196 (4)
CHEBI:16708 (4)
CHEBI:17568 (4)
CHEBI:17992 (4)
CHEBI:26271 (4)
CHEBI:28842 (4)
CHEBI:28897 (4)
CHEBI:30769 (4)
CHEBI:132194 (3)

Metabolite Name

2-Piperidinecarboxylic acid, 1-(trimethylsilyl)-, trimethylsilyl ester (3)
Adenosine (3)
Alanine (3)
Alpha-D-Mannopyranose, 1,2,3,4,6-pentakis-O-(trimethylsilyl)- (3)
Butanoic acid, 2,4-bis[(trimethylsilyl)oxy]-, trimethylsilyl ester (3)
Glutamine (3)
L-Aspartic acid, N-(trimethylsilyl)-, bis(trimethylsilyl) ester (3)
L-Isoleucine, N-(trimethylsilyl)-, trimethylsilyl ester (3)
Leucine (3)
Lysine (3)
Methionine (3)
N,O-Bis-(trimethylsilyl)-2-pyrrolidone carboxylic acid (3)
Nonadecane (3)
Ornithine (3)
Pentadecane (3)
Phenylalanine (3)
Phosphoric acid, bis(trimethylsilyl) 2,3-bis[(trimethylsilyl)oxy]propyl ester (3)
Pyridine, 3-trimethylsiloxy- (3)
Serine (3)
Silanamine, 1,1,1-trimethyl-N-(trimethylsilyl)-N-[2-[(trimethylsilyl)oxy]ethyl]- (3)
Silanamine, N-[2-[3,4-bis[(trimethylsilyl)oxy]phenyl]ethyl]-1,1,1-trimethyl-N-(trimethylsilyl)- (3)
Threonine (3)
Trimethylsilyl ether of glycerol (3)
Tryptophan (3)
Tyrosine (3)
Valine (3)
4-(Trimethylsilyl)morpholine (2)
4-aminobutyric acid (2)
Arabinofuranose, 1,2,3,5-tetrakis-O-(trimethylsilyl)- (2)
Arginine (2)

IsPrivate

False (2)

First Public Date

2025 (2)
2026 (1)
2020 (1)

Modelling Approach

Ordinary differential equation model (2)

Modification

15.994915 (1)
42.010565 (1)
57.021464 (1)

Study type

Transcription profiling by array (25)
RNA-seq of coding RNA (8)
ChIP-seq (4)
Comparative genomic hybridization by array (2)
Genotyping by array (1)
Methylation profiling by array (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (251)
2021 (243)
2023 (229)
2025 (216)
2024 (206)
2020 (170)
2019 (142)
2018 (124)
2016 (95)
2015 (92)
2017 (84)
2014 (71)
2012 (65)
2013 (62)
2011 (34)
2026 (29)
2009 (27)
2010 (22)
2008 (15)
2006 (10)
2007 (9)
2005 (5)
2004 (4)
2003 (2)
2000 (2)
2002 (1)
1999 (1)
1998 (1)

Lab affiliation

Distinguished Professor Associate Chair for Undergraduate Affairs (4)
Helmholtz-Centre for Environmental Research UFZ GmbH (3)
Helmholtz-Centre for Environmental Research – UFZ, Department of Molecular Toxicology (3)
Australian Institute for Bioengineering and Nanotechnology (AIBN), The University of Queensland, Australia (2)
Department of Biochemistry and Molecular Biology Indiana University School of Medicine Indianapolis, IN (2)
Ahmet Hoke M.D., Ph.D. FRCPC Professor, Neurology and Neuroscience Director, Neuromuscular Division Director, Merkin Peripheral Neuropathy and Nerve Regeneration Center Editor-in-Chief, Experimental Neurology Johns Hopkins School of Medicine 855 N. Wolfe St., Rangos 248 Baltimore, MD, 21205 USA (1)
Assistant Professor, Gene Expression & Regulation Program, Wistar Institute Cancer Center, Philadelphia PA, USA (1)
Associate Professor in Molecular Reproductive Biology, Discovery and Translational Sciences Department, Leeds Institute of Cardiovascular and Metabolic Medicine (LICAMM), Faculty of Medicine and Health Sciences, University of Leeds, UK (1)
Australian Institute for Bioengineering and Nanotechnolog (AIBN), The University of Queensland (1)
Australian Institute for Bioengineering and Nanotechnology (AIBN), The University of Queensland (1)
Biomedical Sciences , Iowa State University (1)
CIR, Queen’s Medical Research Institute, University of Edinburgh (1)
Center for Cancer Research, Massachusetts General Hospital, Boston MA, USA;Department of Chemistry and Chemical Biology, Harvard University, Cambridge MA, USA. (1)
College of Animal Science and Technology, Shandong Agricultural University, Taian, Shandong, 271001, P. R. China. (1)
Department of Anesthesiology, University of California San Diego (1)
Department of Chemistry Center for Gastrointestinal Biology and Disease Integrated Program for Biological and Genome Sciences University of North Carolina at Chapel Hill (1)
Department of Medicine, University of Cambridge, Cambridge, UK (1)
Department of Musculoskeletal Biology Institute of Ageing and Chronic Disease University of Liverpool (1)
Department of Pathology, Universtity of British Columbia and BC Children's Hospital Research Institute (1)
Department of Surgery, Indiana University School of Medicine, Indianapolis, IN 46202 Department of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN 46202. VA Roudebush Medical Center, Indianapolis, IN 46202 (1)
Dept. Plasma Proteins, Sanquin Research, Amsterdam, The Netherlands (1)
Epilepsy Research Laboratory Department of Biomedical Sciences College of Veterinary Medicine Iowa State University Ames Iowa 50011-1250 USA (1)
Executive Director Cancer Research Group Leader, Gene Regulation Lab Peter MacCallum Cancer Centre, Parkville VIC 3052, Australia (1)
Executive Director Cancer Research, Peter MacCallum Cancer Centre. Head, The Sir Peter MacCallum Department of Oncology, The University of Melbourne. (1)
Helmholtz-Centre for Environmental Research - UFZ, Department of Molecular Toxicology (1)
IUSM Center for Proteome Analysis, Department of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN (1)
Institute of Biodiversity, Animal Health and Comparative Medicine, University of Glasgow, Glasgow G61 1QH (1)
Institute of Cancer Research (1)
Joint Proteomics Facility (1)
Melbourne Dental School, University of Melbourne, Victoria, Australia (1)

Previous page
1 / 232
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 232
Next page

Sort by:

Relevance

Page size

Frequency of atrial thrombus formation in patients with atrial fibrillation under treatment with non-vitamin K oral anticoagulants in comparison to vitamin K antagonists: a systematic review and meta-analysis.

Not available

S-EPMC6198509 | biostudies-literature

An IS257-derived hybrid promoter directs transcription of a tetA(K) tetracycline resistance gene in the Staphylococcus aureus chromosomal mec region.

Not available

S-EPMC101884 | biostudies-literature

Lebeda2008 - BoTN Paralysis (4 step model)

Lebeda2008 - BoTN Paralysis (4 step model) The onset of paralysis of skeletal muscles induced by BoNT/A at the isolated rat neuromuscular junction is described in this model. This model is the extended model of BIOMD0000000267 , which itself is the reduced form of the model developed...

2024-09-02 | BIOMD0000000178 | BioModels

Lebeda2008 - BoNT paralysis (3 step model)

Lebeda2008 - BoNT paralysis (3 step model) The onset of paralysis of skeletal muscles induced by BoNT/A at the isolated rat neuromuscular junction is describing in the model. This is the 3-step model described in the paper. This model is the reduced form of the model developed my Simpson ...

2024-09-02 | BIOMD0000000267 | BioModels

A novel dual-fluorescence strategy for functionally validating microRNA targets in 3' untranslated regions: regulation of the inward rectifier potassium channel K(ir)2.1 by miR-212.

Not available

S-EPMC3475433 | biostudies-literature

Gene expression data from immortal and arsenite-transformed malignant prostate epithelial cells

The aim of this study was to determine how gene expression is changed after arsenite-induced malignant transformation of prostate epithelial cells. Gene expression from three distinct passages of untreated, immortal RWPE-1 cells was compared to three timepoints of arsenite-exposed RWPE-1 cells (CAsE...

ORGANISM(S): Homo sapiens

2013-05-18 | E-GEOD-47047 | biostudies-arrayexpress

Loss-of-function mutations and global rearrangements in GPC3 in patients with Simpson-Golabi-Behmel syndrome.

Not available

S-EPMC5061924 | biostudies-literature

Sequential intracellular release of water-soluble cargos from Shell-crosslinked polymersomes.

Not available

S-EPMC6008218 | biostudies-literature

Delineation of a Phenotype Caused by a KAT6B Missense Variant Not Resembling Say-Barber-Biesecker-Young-Simpson and Genitopatellar Syndromes.

Not available

S-EPMC9149453 | biostudies-literature

Extracellular remodelling during oncogenic Ras-induced epithelial-mesenchymal transition facilitates MDCK cell migration.

PeptideAtlas ID: PAe003680. Original data file: O070224-30.mgf. Data published as part of J Proteome Res. 2010 Feb 5;9(2):1007-19 . From the Abstract: {{i}}... To gain insights into extracellular mediators associated with EMT, we conducted an extensive proteomic analysis of the secretome from MDCK ...

ORGANISM(S): Dog, Canine_adenovirus, Canine_calicivirus, Canine_distemper_virus, Canine_minute_virus, Canine_oral_papillomavirus, Canine_papillomavirus_2, Canine_papillomavirus___3, Canine_papillomavirus___4, Canine_parvovirus

GPM11210000341 | GPMDB

Previous page
1 / 232
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 232
Next page

Sort by:

Relevance

Page size

2317 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

CHEBI ID

Metabolite Name

IsPrivate

First Public Date

Modelling Approach

Modification

Study type

Release Date

Lab affiliation

OmicsDI is part of the ELIXIR infrastructure

Tweets