Skeletal myoblasts

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Multiomics (1)

Organisms

Mus musculus (270)
Homo sapiens (121)
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Mus (1)
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Capra hircus (1)

Organisms

Mus musculus (197)
Homo sapiens (80)
Bos taurus (6)
Gallus gallus (6)
Rattus norvegicus (4)
Sus scrofa (2)
Pteronotus mesoamericanus (1)
Megalobrama amblycephala (1)
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Mus (1)
Larimichthys crocea (1)
Danio rerio (1)
unidentified (1)

Repository

ENA (337)
geo (228)
biostudies-arrayexpress (183)
pride (52)
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iProX (3)
GNPS (1)
jPOST (1)
PanoramaPublic (1)

Tissue

Cell culture (24)
Skeletal muscle myoblast (8)
Myoblast (5)
Skeletal muscle (4)
Skeletal muscle myoblast in skeletal muscle (3)
Muscle cell (2)
Myoblast cell line (2)
Myotube (2)
Permanent cell line cell (2)
Skeletal muscle cell line (2)
Stem cell (2)
Activated skeletal muscle satellite cell (1)
Adipose tissue (1)
Fibroblast (1)
Gastrocnemius (1)
Leg muscle (1)
Muscle (1)
Myoblast maturation (1)
Primary cell (1)
Proliferating skeletal muscle satellite cell (1)
Skeletal muscle cell (1)
Skeletal muscle fiber (1)
Skeletal muscle tissue of trunk (1)

Disease

Disease free (2)
Normal (1)
Alveolar rhabdomyosarcoma (1)
Duchenne muscular dystrophy (1)
Embryonal rhabdomyosarcoma (1)
Facioscapulohumeral muscular dystrophy 1 (1)
Rhabdomyosarcoma (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (52)
Shotgun proteomics (28)
Bottom-up proteomics (10)
Data-dependent acquisition (8)
Affinity purification coupled with mass spectrometry proteomics (5)
Mass spectrometry (4)
Data-independent acquisition (3)
Gel-based experiment (3)
Top-down proteomics (3)
NMR spectroscopy (1)
SRM/MRM (1)

Instrument Platform

NextSeq 500 (5)
Illumina NovaSeq 6000 (4)
Illumina HiSeq 1500 (2)
6470A Agilent QQQ (2)
Orbitrap Fusion (2)
Orbitrap Fusion Lumos (2)
BD FACS Aria II (1)
Qubit 4.0 Fluorometer/ Agilen 5300 Fragment Analyzer (1)
Covaris (1)
Qubit (1)
FS450 (1)
GCS3000 (1)
Illumina NovaSeq X (1)
Ion Torrent Proton (1)
Illumina (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 4000 (1)
LTQ FT (1)
Q Exactive (1)
Q Exactive HF (1)
Q Exactive Plus (1)
Liquid Chromatography MS - (1)
Nuclear Magnetic Resonance (NMR) - (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2014 (41)
2015 (38)
2024 (37)
2023 (35)
2016 (33)
2012 (33)
2026 (29)
2021 (29)
2020 (28)
2025 (25)
2019 (22)
2013 (21)
2017 (19)
2022 (17)
2011 (15)
2008 (15)
2018 (13)
2010 (12)
2007 (11)
2009 (7)
2005 (5)
2004 (2)

CHEBI ID

CHEBI:17822 (2)
CHEBI:26271 (2)
CHEBI:17287 (2)
CHEBI:25094 (2)
CHEBI:17202 (2)
CHEBI:18237 (2)
CHEBI:22660 (2)
CHEBI:22653 (2)
CHEBI:27570 (2)
CHEBI:18186 (2)
CHEBI:26986 (2)
CHEBI:16811 (2)
CHEBI:17234 (2)
CHEBI:28300 (2)
CHEBI:24898 (2)
CHEBI:25017 (2)
CHEBI:15428 (2)
CHEBI:17754 (2)
CHEBI:15741 (2)
CHEBI:28044 (2)
CHEBI:17154 (2)
CHEBI:27266 (2)
CHEBI:7916 (2)
CHEBI:17376 (2)
CHEBI:29016 (2)
CHEBI:15351 (2)
CHEBI:16108 (2)
CHEBI:18012 (2)
CHEBI:32816 (2)
CHEBI:16027 (2)

Metabolite Name

Lactic acid (2)
IMP (2)
FAD (2)
AMP (2)
O-Phosphoethanolamine (2)
Glucose 6-phosphate (2)
GMP (2)
Succinic acid (2)
UMP (2)
Taurine (2)
Arachidonic acid (2)
NADH (2)
Creatine (2)
Inosine (2)
Glycerophosphorylcholine (1)
Ribulose 5-phosphate (1)
Glycerophosphatidylethanolamine (1)
D-ribose 5-phosphate (1)
4-hydroxybutanoic acid (1)
4-amino-3-hydroxybutyric acid (1)
Nitrosyl acetate (1)
Malvidin 3-(6''-acetyl-galactoside) (1)
N-methyl-d-aspartic acid (1)
D-xylulose 5-phosphate (1)
L-tartaric acid (1)
N-acetyl-d-hexosamine 1-phosphate (1)
Dihydronicotinamide formycin dinucleotide (1)
DL-Glyceraldehyde 3-Phosphate (1)
N-acetyl-b-neuraminic acid (1)
Beta-L-Dioxolane-cytidine (1)

IsPrivate

False (5)

First Public Date

2024 (54)
2014 (51)
2023 (35)
2025 (27)
2019 (26)
2026 (25)
2021 (23)
2022 (21)
2017 (20)
2020 (16)
2018 (13)
2015 (13)
2013 (7)
2016 (6)

Modelling Approach

Ordinary differential equation model (5)

Study type

Transcription profiling by array (113)
RNA-seq of coding RNA (29)
ChIP-seq (21)
Unknown experiment type (3)
Other (3)
ChIP-chip by tiling array (2)
Transcription profiling by RT-PCR (2)
MicroRNA profiling by array (2)
Cell line - High-throughput sequencing (1)
MBD-seq (1)
MicroRNA profiling by high throughput sequencing (1)
Methylation profiling by array (1)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (138)
2020 (133)
2024 (123)
2023 (121)
2021 (113)
2025 (102)
2019 (92)
2016 (90)
2015 (89)
2018 (81)
2014 (78)
2017 (72)
2013 (62)
2012 (60)
2011 (57)
2010 (38)
2008 (34)
2009 (33)
2026 (25)
2007 (24)
2006 (16)
2004 (5)
2000 (5)
2001 (3)
2003 (2)
2002 (2)
1999 (2)
2005 (1)
1998 (1)

Lab affiliation

The University of Melbourne (5)
Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and BIOSS Centre for Biological Signalling Studies, University of Freiburg (3)
Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and BIOSS Centre for Biological Signalling Studies, University of Freiburg, 79104 Freiburg im Breisgau, Germany (3)
Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and Signalling Research Centres BIOSS and CIBSS, University of Freiburg, 79104 Freiburg im Breisgau, Germany (2)
Head of Proteomics (2)
Liverpool John Moores University (2)
Chief Scientist, Centre for Cellular and Molecular Biology, Council of Scientific and Industrial Research Hyderabad, Telangana- 500007, India (1)
China Agricultural University (1)
Department of Biomedical Sciences Paul L. Foster School of Medicine Texas Tech Health Sciences Center 5001 El Paso Drive El Paso, Texas 79905 (1)
Department of Biomolecular Sciences, Weizmann Institute of Science, Rehovot 761001, Israel (1)
Department of Burns and Reconstructive Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, P.R. China. (1)
Department of Cell Biology, Harvard Medical School, Boston, MA, USA (1)
Department of Chemical Sciences of the University of Napoli Federico II (1)
Department of Integrative Medical Biology (IMB), Faculty of Medicine, Umeå University, 90187 Umeå, Sweden Section of Physiotherapy, Department of Community Medicine and Rehabilitation, Faculty of Medicine, Umeå University, 90187 Umeå, Sweden (1)
Department of Phamaceutical Sciences Wayne State University (1)
Dept. of Orthopaedics and Traumatology The Chinese University of Hong Kong, Hong Kong, China (1)
Division of Pediatric Hematology and Oncology, Department of Pediatrics, Inselspital, Bern University Hospital, University of Bern, Switzerland (1)
EDyP (1)
Emeritus Scientist, CSIR-Centre for Cellular and Molecular Biology (CCMB) (1)
Fudan University (1)
Institute for Clinical Chemistry and Pathobiochemistry, Department for Diagnostic Laboratory Medicine, University Hospital Tübingen, Tübingen, Germany (1)
Institute of Biochemistry and Molecular Biology I, University Clinics and Faculty of Medicine, Heinrich-Heine University Düsseldorf, Germany (1)
Institute of Life Course & Medical Sciences Faculty of Health and Life Sciences University of Liverpool Liverpool UK (1)
Institute of Sports Medicine Copenhagen, Bispebjerg Hospital, and Center for Healthy Aging, University of Copenhagen, Copenhagen, Denmark. (1)
Italian National Institute of Health - Department of Neuroscience (1)
Key Laboratory of Protein and Peptide Pharmaceuticals & Laboratory of Proteomics, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China (1)
Laboratory of Regenerative and Movement Biology, Dept. of Health Sciences and Technology ETH Zurich, Schorenstrasse 16, 8603 Schwerzenbach, Switzerland (1)
Leibniz Institute on Aging – Fritz Lipmann Institute (FLI) Beutenbergstrasse 11 07745 Jena, Germany (1)
Max-Delbrück Center for Molecular Medicine, Robert-Rössle Str. 10, 13125 Berlin, Germany (1)
Molecular Medicine, Huang Lab, Scripps Research, United States (1)

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Integrated Transcriptomic and Metabolomic Reveals VASH1 Influences Pork Quality by Regulating Skeletal Muscle Glycolysis

Glycolytic potential (GP) is an important index for evaluating meat quality in the pig industry, since high muscle glycogen content generally leads to rapid postmortem glycolysis, which contributes to low meat quality. However, there are few researches to elucidate the genetic mechanisms underlie...

2025-10-24 | MTBLS13217 | MetaboLights

Comprehensive analysis of the proteome, phosphoproteome and N-linked sialylated glycoproteome of C2C12 myoblasts

C2C12 myoblast is a model that has been used extensively to study the process of skeletal muscle differentiation. Proteomics has advanced our understanding of skeletal muscle biology and the process of myogenesis. However, there is still no deep coverage of C2C12 myoblast proteome, which is importan...

ORGANISM(S): Mus musculus (Mouse)

2020-11-27 | PXD011334 | Pride

Transcription profiling of human skeletal myoblasts misexpressing myocardin

transcriptional effects of mis-expression of full length (935) myocardin in growing human skeletal myoblasts Experiment Overall Design: Compare transcriptional profiles of Ad-myocardin infected SKM5 cells with that of Ad-B-gal infected cells

ORGANISM(S): Homo sapiens

2008-06-12 | E-GEOD-3378 | biostudies-arrayexpress

Myocardin-related transcription factors (MRTFs) play a central role in the regulation of actin expression and cytoskeletal dynamics. Stimuli that promote actin polymerization allow for shuttling of MRTFs to the nucleus where they activate serum response factor (SRF), a regulator of actin and other c...

ORGANISM(S): Mus musculus

2016-08-02 | E-GEOD-84063 | biostudies-arrayexpress

The transcriptomic signature of myostatin inhibitory influence on the differentiation of mouse C2C12 myoblasts

GDF8 (myostatin) is a unique cytokine strongly affecting the skeletal muscle phenotype in human and animals. The aim of the present study was to elucidate the molecular mechanism of myostatin influence on the differentiation of mouse C2C12 myoblasts, using the global-transcriptome analysis with the ...

ORGANISM(S): Mus musculus

2014-07-23 | E-GEOD-59674 | biostudies-arrayexpress

ChIP-seq of GATA4 in mouse skeletal muscle myoblasts

GATA4 occupancy on the mouse genome of satellite cell-derived primary myoblasts. Proliferating myoblasts cultured in growth medium were immunoprecipitated with anti-GATA4 antibody or control IgG. Precipitated genomic DNAs were subjected to next generation sequencing. Paired-end 150 bp sequence reads...

ORGANISM(S): Mus musculus

2015-04-10 | E-GEOD-67703 | biostudies-arrayexpress

TGFbeta effect on human skeletal muscle primary cultured cells

In this experiment we have analyzed the effect of TGFbeta-1 incubation (3h of incubation time) on the gene expression profiles of human primary cultured skeletal muscle cells, both in growing myoblasts or in differentiated muscle fibres (after 10-days of differentiation), obtained from skeletal musc...

ORGANISM(S): Homo sapiens

2016-08-07 | E-MEXP-2937 | biostudies-arrayexpress

Transcription profiling of human embryonic skeletal myoblasts

Skeletal muscle cells (myoblasts - human fetal cells from 17 week old embryo) Experiment Overall Design: this experiment include 1 samples and 6 replicates

ORGANISM(S): Homo sapiens

2008-06-12 | E-GEOD-3230 | biostudies-arrayexpress

PFOS perturbs metabolism in C2C12 skeletal myoblasts

PRJNA1291085 | ENA

DUX4-induced gene expression is the major molecular signature in FSHD skeletal muscle

Facioscapulohumeral dystrophy (FSHD) is caused by decreased epigenetic repression of the D4Z4 macrosatellite array and recent studies have shown that this results in the expression of low levels of the DUX4 mRNA in skeletal muscle. Several other mechanisms have been suggested for FSHD pathophysiolog...

ORGANISM(S): Homo sapiens

2014-07-03 | E-GEOD-56787 | biostudies-arrayexpress

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