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Unknown
(211)
Transcriptomics
(35)
Genomics
(25)
Proteomics
(6)
Metabolomics
(1)
Organisms
Arabidopsis thaliana
(10)
Homo sapiens
(10)
Aerococcus urinae NBRC 15544 = CCUG 36881
(6)
Alteromonadales
(6)
Bacteria
(6)
Canis lupus familiaris
(6)
Carya cathayensis
(6)
Ectopseudomonas oleovorans CECT 5344
(6)
Ensifer adhaerens
(6)
Enterococcus faecalis
(6)
Globicatella sanguinis
(6)
Halictus scabiosae
(6)
Histomonas meleagridis
(6)
Human immunodeficiency virus 1
(6)
Listeria monocytogenes
(6)
Methylohalobius crimeensis 10Ki
(6)
Mus musculus
(6)
Olavius algarvensis sulfate-reducing endosymbiont
(6)
Ophrys garganica
(6)
Ophrys sphegodes
(6)
Pseudomonas aeruginosa SJTD-1
(6)
Pseudomonas putida KT2440
(6)
Mus musculus
(5)
Rhodospirillum rubrum
(4)
Drosophila melanogaster
(2)
Plasmodium falciparum
(2)
Phytophthora sojae
(1)
Bos taurus
(1)
Rattus norvegicus
(1)
Methylorubrum extorquens
(1)
Organisms
Methylorubrum extorquens
(9)
Methylorubrum zatmanii
(3)
Plasmodium falciparum
(2)
Methylorubrum pseudosasae
(1)
Repository
biostudies-arrayexpress
(35)
ENA
(22)
pride
(6)
geo
(3)
MetaboLights
(1)
Tissue
Cell culture
(2)
Blood
(1)
Blood cell
(1)
Cell line cell
(1)
Peripheral blood mononuclear cell
(1)
Tonsil
(1)
Disease
Adult liposarcoma
(1)
Breast cancer
(1)
Head and neck squamous cell carcinoma
(1)
Melanoma
(1)
Non-small cell lung carcinoma
(1)
Severe acute respiratory syndrome
(1)
Technology Type
Mass Spectrometry
(6)
Affinity purification coupled with mass spectrometry proteomics
(3)
Shotgun proteomics
(3)
Mass spectrometry
(1)
Affinity proteomics
(1)
Bottom-up proteomics
(1)
Data-dependent acquisition
(1)
Instrument Platform
NextSeq 500
(3)
Illumina HiSeq 1500
(1)
Illumina HiSeq 2500
(1)
Illumina NovaSeq 6000
(1)
Illumina HiSeq 4000
(1)
Liquid Chromatography MS - alternating - reverse phase
(1)
Publication Date
2014
(8)
2013
(5)
2010
(5)
2022
(4)
2011
(4)
2025
(4)
2024
(3)
2015
(3)
2016
(2)
2009
(2)
2021
(1)
2018
(1)
2008
(1)
2019
(1)
2026
(1)
CHEBI ID
CHEBI:1368
(1)
CHEBI:8185
(1)
CHEBI:167540
(1)
CHEBI:175931
(1)
CHEBI:132820
(1)
CHEBI:181036
(1)
CHEBI:75642
(1)
CHEBI:176884
(1)
CHEBI:49125
(1)
CHEBI:75098
(1)
CHEBI:175611
(1)
CHEBI:27522
(1)
CHEBI:132366
(1)
CHEBI:32491
(1)
CHEBI:80897
(1)
CHEBI:132821
(1)
CHEBI:114954
(1)
CHEBI:66287
(1)
CHEBI:27395
(1)
CHEBI:139424
(1)
CHEBI:69671
(1)
CHEBI:3461
(1)
CHEBI:134253
(1)
CHEBI:86904
(1)
CHEBI:175933
(1)
CHEBI:6373
(1)
CHEBI:64907
(1)
CHEBI:17527
(1)
CHEBI:75644
(1)
CHEBI:39
(1)
Metabolite Name
3,3',4-O-Trimethylellagic acid
(1)
5,4'-Dihydroxy-3,6,7,3'-tetramethoxyflavone
(1)
(-)-Epicatechin-3-(3''-O-methyl)gallate
(1)
Physcion-8-O-glucoside
(1)
1-O-Feruloyl-D-Glucose
(1)
Juglone; 5-Hydroxy-1,4-naphthoquinone
(1)
LysoPC 18:2 (2n isomer)
(1)
Matairesinol-4'-O-glucoside (Matairesinoside)
(1)
Arecatannin A1
(1)
1,2,3,6-Tetra-O-Galloyl-D-Glucose
(1)
Chrysophanol-8-O-glucoside
(1)
Cytidine 5'-monophosphate (Cytidylic acid)
(1)
Scopoletin (7-Hydroxy-5-methoxycoumarin)
(1)
3-Carbamyl-1-methylpyridinium (1-Methylnicotinamide)
(1)
LysoPE 16:0 (2n isomer)
(1)
LysoPC 18:0 (2n isomer)
(1)
LysoPC 16:0 (2n isomer)
(1)
Apigenin-7-O-glucoside (Cosmosiin)
(1)
LysoPC 18:3 (2n isomer)
(1)
LysoPE 18:1 (2n isomer)
(1)
Avicularin (Quercetin-3-O-alpha-L-arabinofuranoside)
(1)
D-Panose
(1)
Betanin (Betanidin-5-O-glucoside)
(1)
Kaempferol-3-O-robinoside-7-O-rhamnoside (Robinin)
(1)
Fraxetin (7,8-Dihydroxy-6-methoxycoumarin)
(1)
Sodium Valproate
(1)
10-Heptadecenoic Acid
(1)
2,5-Dihydroxybenzoic acid; Gentisic Acid
(1)
Naringenin-7-O-Neohesperidoside (Naringin)
(1)
Quercetin-3-O-rhamnoside (Quercitrin)
(1)
First Public Date
2021
(10)
2022
(4)
2025
(2)
2020
(2)
2019
(2)
2026
(1)
2024
(1)
Classification
protozoa
(2)
Study type
Transcription profiling by array
(27)
RNA-seq of coding RNA
(3)
ChIP-seq
(2)
ChIP-chip by tiling array
(1)
Methylation profiling by array
(1)
Methylation profiling by high throughput sequencing
(1)
Release Date
2014
(23)
2022
(21)
2021
(21)
2025
(18)
2015
(17)
2019
(17)
2018
(16)
2020
(14)
2024
(12)
2016
(12)
2011
(12)
2017
(12)
2013
(9)
2010
(9)
2023
(9)
2009
(6)
2008
(5)
2002
(3)
2012
(2)
2005
(2)
2004
(2)
2026
(1)
2003
(1)
2000
(1)
1998
(1)
Lab affiliation
Department of Biochemistry, Western University, Canada
(2)
Bernhard Nocht Institute for Tropical Medicine
(1)
Department of Biochemistry, Western University
(1)
Malaria Cell Biology. Bernhard Nocht Institute for Tropical Medicine. Hamburg, Germany
(1)
NKI Proteomics Facility, The Netherlands Cancer Institute, Plesmanlaan 121, 1066CX Amsterdam, The Netherlands
(1)
Tags
pathogen:protozoan
(2)
pathogen
(2)
xref:PubMed:40899831
(1)
xref:PubMed:40166204
(1)
xref:PubMed:41460168
(1)
xref:PubMed:32620892
(1)
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Methylorubrum extorquens SLI 499
Methylorubrum extorquens SLI 499 genome sequencing
PRJNA834441
|
ENA
Cite
Methylorubrum zatmanii strain:SLI 505
Methylorubrum zatmanii SLI 505 genome sequencing
PRJNA709237
|
ENA
Cite
Methylorubrum extorquens strain:SLI 231
Methylorubrum extorquens SLI 231 genome sequencing
PRJNA709235
|
ENA
Cite
Methylorubrum zatmanii strain:SLI 384
Methylorubrum zatmanii SLI 384 genome sequencing
PRJNA709236
|
ENA
Cite
Methylorubrum extorquens strain:SLI 575
Methylorubrum extorquens SLI 575 genome sequencing
PRJNA709239
|
ENA
Cite
Methylorubrum extorquens strain:SLI 576
Methylorubrum extorquens SLI 576 genome sequencing
PRJNA709240
|
ENA
Cite
Methylorubrum extorquens strain:SLI 716
Methylorubrum extorquens SLI 716 genome sequencing
PRJNA709241
|
ENA
Cite
Methylorubrum extorquens strain:SLI 285
Methylorubrum extorquens SLI 285 genome sequencing
PRJNA834440
|
ENA
Cite
Methylorubrum pseudosasae strain:SLI 233
Methylorubrum pseudosasae SLI 233 genome sequencing
PRJNA834438
|
ENA
Cite
Methylorubrum extorquens strain:SLI 223
Methylorubrum extorquens SLI 223 genome sequencing
PRJNA709234
|
ENA
Cite
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