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TranscriptomicsGenome-wide characterization of maize small RNA loci and their regulation in the required to maintain repression6-1 (rmr6-1) mutant and long-term abiotic stresses
Endogenous small RNAs (sRNAs) contribute to gene regulation and genome homeostasis but their activities and functions are incompletely known. The maize genome has a high number of transposable elements (TEs; almost 85%), some of which spawn abundant sRNAs. We performed sRNA and total RNA sequencing ...
ORGANISM(S): Zea mays 
2016-01-20 | E-GEOD-70487 | biostudies-arrayexpress
TranscriptomicsSmall nucleolar RNAs as new biomarkers in chronic lymphocytic leukemia
Small nucleolar RNAs (snoRNAs) and small Cajal body-specific RNAs are non-coding RNAs involved in the maturation of other RNA molecules. Alterations of sno/scaRNA expression may play a role in cancerogenesis. This study elucidates the patterns of sno/scaRNA expression in highly purified cells from 2...
ORGANISM(S): Homo sapiens 
2014-03-24 | E-GEOD-46261 | biostudies-arrayexpress
GenomicsA small cell lung cancer genome reports complex tobacco exposure signatures
Cancer is driven by mutation. Worldwide, tobacco smoking is the major lifestyle exposure that causes cancer, exerting carcinogenicity through 60 chemicals that bind and mutate DNA. Using massively parallel sequencing technology, we sequenced a small cell lung cancer cell line, NCI-H209, to explore t...
EGAS00000000051 | EGA
ProteomicsSequence analysis of Giardia virus proteins by LC-MS/MS
Giardiasis, caused by the protozoan parasite Giardia duodenalis, is an intestinal diarrheal disease affecting almost one billion people worldwide. A small endosymbiotic dsRNA viruses, G. lamblia virus (GLV), genus Giardiavirus, family Totiviridae, might inhabit human and animal isolates of G. duoden...
ORGANISM(S): Giardia intestinalis (Giardia lamblia) 
2021-07-05 | PXD025785 | Pride
Proteomics Giardia duodenalis Giardiavirus 
GenomicsEGAD00000000054
NCI-H209 is an immortal cell line derived from a bone marrow metastasis of a patient with small cell lung cancer, taken before chemotherapy. The specimen showed histologically typical small cells with classic neuroendocrine features. NCI-BL209 is an EBV-transformed B-cell line derived from the same ...
EGAD00000000054 | EGA
ProteomicsImmune response biomarker profiling of serum from prostate cancer patients treated with anti-CTLA-4 immunotherapy.
Anti-CTLA-4 induced antibody responses to antigens in prostate cancer patients. Pre-treatment and post-treatment sera from 5 clinical responders and 6 clinical non-responders were used to hybridize protein arrays.
ORGANISM(S): Homo sapiens 
2012-11-05 | E-GEOD-39688 | biostudies-arrayexpress
UnknownCynomolgus macaques naturally infected with Trypanosoma cruzi-I exhibit an overall mixed pro-inflammatory/modulated cytokine signature characteristic of human Chagas disease.
Not available
S-EPMC5321273 | biostudies-literature
UnknownDNA extraction and amplification from contemporary Polynesian bark-cloth.
Not available
S-EPMC3578839 | biostudies-literature
ProteomicsIdentification of regulators of polyploidization presents therapeutic targetsfor treatment of AMKL
Wen Q, Goldenson B, Silver SJ, Schenone M, Dancik V, Huang Z, Wang LZ, Lewis TA, An WF, Li X, Bray MA, Thiollier C, Diebold L, Gilles L, Vokes MS, Moore CB, Bliss-Moreau M, Verplank L, Tolliday NJ, Mishra R, Vemula S, Shi J, Wei L, Kapur R, Lopez CK, Gerby B, Ballerini P, Pflumio F, Gilliland DG, Go...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2014-01-27 | MSV000078536 | MassIVE
UnknownHeat inactivation of foetal bovine serum performed after EV-depletion influences the proteome of cell-derived extracellular vesicles.
Not available
S-EPMC10805629 | biostudies-literature
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