Sort   by:  
 Page size 
ProteomicsSoil metaproteomics data analysis based on de novo sequencing with the deep learning-based Kaiko model
We generated a protein database directly from soil metaproteomic data by identifying the microbial composition using the Kaiko model's de novo sequencing methods. We first analyzed the mass spectra de novo (without a database), identifying species from the observed peptides. We next gathered full p...
ORGANISM(S): Environmental Samples <bacteria> (ncbitaxon:48479) 
2020-10-20 | MSV000086336 | MassIVE
ProteomicsEndophyte-promoted Phosphorous Fixation in Poplar
Studying the endophyte strains of poplar that help the plant solubilize phosphate, we observed direct evidence of endophyte-promoted phosphorous fixation. Using synchrotron x-ray fluorescence (SR-XRF) microscopy combined with x-ray absorption near-edge structure (XANES), we visualized the nutrient p...
ORGANISM(S): Populus Trichocarpa (ncbitaxon:3694) 
2020-01-29 | MSV000084860 | MassIVE
ProteomicsHuman Calu-3 cell lipidome response to a wild type infectious clone of H7N9 and mutant H7N9 viruses
Lipidomics data from Calu-3 cell culture; Treated with wild-type and mutant H7N9 and mockulum; Time points 0, 3, 7, 12, 18 & 24 h; 5 biological replicates
ORGANISM(S): Mus Musculus (ncbitaxon:10090) 
2015-11-23 | MSV000079386 | MassIVE
ProteomicsPrimary human airway epithelial cells metabolome response to an icMERS coronavirus
Metabolomics data from cell culture; time points 0, 12, 24, 36 & 48 h
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Middle East Respiratory Syndrome-related Coronavirus (ncbitaxon:1335626) 
2018-01-05 | MSV000081889 | MassIVE
ProteomicsPrimary human airway epithelial cells metabolome response to an icMERS coronavirus
Metabolomics data from cell culture; time points 0, 12, 24, 36 & 48 h
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Middle East Respiratory Syndrome-related Coronavirus (ncbitaxon:1335626) 
2018-01-05 | MSV000081890 | MassIVE
ProteomicsPrimary human microvascular endothelial cells metabolome response to an icMERS coronavirus
Metabolomics data from cell culture; Treated with wild-type MERS-CoV, MERS-CoV mutants and mockulum; 5 biological replicates; time points 0, 12, 24, 36 & 48 h
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Middle East Respiratory Syndrome-related Coronavirus (ncbitaxon:1335626) 
2016-08-04 | MSV000080017 | MassIVE
ProteomicsHuman Calu-3 cell proteome response to a wild type infectious clone of H5N1 and mutant H5N1 viruses
Lipidomics data from Calu-3 cell culture; Treated with wild-type and mutant H5N1 and mockulum; Time points 0, 3, 7, 12, 18 & 24 h; 5 biological replicates
ORGANISM(S): Mus Musculus (ncbitaxon:10090) 
2016-01-18 | MSV000079459 | MassIVE
ProteomicsCalu-3 cell lipidome response to a wild type H5N1 and mutants Influenza viruses
Lipidomics data from Calu-3 cell culture; Treated with wild-type and mutant H5N1 and mockulum; Time points 0, 3, 7, 12, 18 & 24 h; 5 biological replicates
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2016-08-04 | MSV000080023 | MassIVE
ProteomicsCalu-3 metabolome response to an infectious clone of H7N9 Influenza virus and mutant H7N9 viruses
Metabolomics data from Calu-3 cell culture; Treated with wild-type and mutant H7N9 and mockulum; Time points 0, 3, 7, 12, 18 & 24 h; 5 biological replicates
ORGANISM(S): Human Calu-3 Cell Homo Sapiens (ncbitaxon:9606) 
2015-06-11 | MSV000079156 | MassIVE
ProteomicsCalu-3 cell metabolome response to H1N1 virus
Metabolomics data from Calu-3 cells; Treated with wild-type and mutant H7N9 and mockulum; Time points 1, 2, 4 & 7 days; 5 biological replicates
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2016-05-04 | MSV000079704 | MassIVE
Sort   by:  
 Page size