Smith W W - OmicsDI

Show results for

Unknown (8133)
Transcriptomics (852)
Proteomics (239)
Genomics (230)
Metabolomics (160)
Models (7)
Genomic (1)
Other (1)
Multiomics (1)

Organisms

Homo sapiens (499)
Mus musculus (290)
Caenorhabditis elegans (29)
Saccharomyces cerevisiae (28)
Arabidopsis thaliana (24)
Drosophila melanogaster (20)
Danio rerio (15)
Mycobacterium tuberculosis (13)
Escherichia coli (13)
Bos taurus (12)
Gallus gallus (12)
Rattus norvegicus (12)
Daphnia pulex (9)
Escherichia coli str. K-12 substr. MG1655 (7)
Streptomyces coelicolor (7)
Halobacterium salinarum (6)
Yersinia pestis (6)
Streptomyces coelicolor A3(2) (6)
Medicago truncatula (6)
Fusarium fujikuroi (5)
mixed sample (5)
Salmonella enterica subsp. enterica serovar Typhimurium (5)
Rhizobium leguminosarum (4)
Schizosaccharomyces pombe (4)
Mycolicibacterium smegmatis MC2 155 (4)
Sus scrofa (4)
Thermotoga maritima MSB8 (3)
Candidatus Pelagibacter ubique HTCC1062 (3)
Gasterosteus aculeatus (3)
Picea abies (3)

Organisms

Mus musculus (2)
Primula violaris (1)
Haloferax volcanii (1)
marine sediment metagenome (1)
marine metagenome (1)
Arabidopsis thaliana (1)
Drosophila melanogaster (1)
Homo sapiens (1)

Repository

biostudies-arrayexpress (966)
pride (180)
MetaboLights (157)
EGA (107)
MassIVE (39)
ENA (12)
PAXDB (7)
PeptideAtlas (6)
FAIRDOMHub (4)
GNPS (3)
PanoramaPublic (3)
BioModels (2)
iProX (2)
dbGaP (1)
GPMDB (1)
jPOST (1)
PMR (1)

Tissue

Cell culture (36)
Brain (13)
Blood plasma (9)
Epithelial cell (8)
Whole body (8)
Embryonic stem cell (6)
Lung (5)
B cell (4)
Blood (4)
Blood cell (4)
Heart (4)
Pancreas (4)
Permanent cell line cell (4)
Plant cell (4)
Primary cell (4)
Skin (4)
Spleen (4)
T cell (4)
Cell suspension culture (3)
Fibroblast (3)
Leaf (3)
Liver (3)
Retina (3)
B-cell chronic lymphocytic leukemia cell (2)
Breast cancer cell (2)
Colon (2)
Endothelial cell (2)
Female Reproductive System (1)
Ovary (1)
Urine (1)

Disease

Acute leukemia (5)
Normal (4)
Breast cancer (4)
Glioblastoma multiforme (3)
Bone osteosarcoma (3)
COVID-19 (3)
Disease free (3)
Type 2 diabetes mellitus (3)
Wounds and Injuries (3)
Porphyria NOS (2)
Alzheimer's disease (2)
With bone lytic lesion (1)
Acute HIV-1 infection (1)
Systemic lupus erythematosus (1)
T. circumcincta infection (1)
N/A (culture-derived) (1)
Immuno-osseus dysplasiaspondyloenchondrodysplasia (SPENCD) (1)
Severe acute respiratory syndrome (1)
Normal (control treated) (1)
Infected (1)
IBDV infected (1)
Colon adenocarcinoma (1)
Non-diabetic (1)
Normal (untreated) (1)
Unstable atherosclerotic plaque region (1)
Adenocarcinoma (1)
Collagen induced arthritis (1)
Control (1)
Not Available (1)
High Grade Ovarian Serous Adenocarcinoma (1)

Technology Type

Mass Spectrometry (180)
Mass spectrometry (136)
Shotgun proteomics (104)
Bottom-up proteomics (39)
Data-dependent acquisition (20)
Mass spectrometry assay (16)
Affinity purification coupled with mass spectrometry proteomics (15)
Data-independent acquisition (13)
Gel-based experiment (9)
Illumina 15K (8)
SWATH MS (8)
NMR spectroscopy (5)
Top-down proteomics (4)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
HDMSE (3)
DiaPASEF (2)
Affymetrix 6.0 (1)
Affymetrix 6.0, Illumina_670k - Illuminus, Illumina 1.2M (1)
HumanOmniExpress-12 v1.1 BeadChip-GenCall (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, Illumina HiSeq 2000 (ILLUMINA) (1)
Illumina HiSeq 2500, ILLUMINA (1)
Illumina HiSeq 2500, Illumina MiSeq, HiSeq X Ten (1)
Illumina_670k - Illuminus, Affymetrix 6.0, Illumina 1.2M (1)
ZCall, HumanExome_12v1.1_A -GenCall (1)
Affinity proteomics (1)
Proteogenomics (1)

Instrument Platform

Illumina NovaSeq 6000 (36)
NextSeq 500 (33)
Illumina HiSeq 2000 (19)
Illumina HiSeq 2500 (18)
NextSeq 550 (13)
Illumina HiSeq 4000 (13)
Illumina Genome Analyzer IIx (8)
Illumina NovaSeq X (7)
Illumina MiSeq (6)
NextSeq 2000 (4)
AB SOLiD 4 System (3)
418 [Affymetrix] (3)
MinION (3)
Illumina HiSeq 3000 (3)
Pacbio Revio (2)
Bio-Rad T100 Thermocycler (2)
PromethION (2)
. (2)
RiboZero (2)
Trizol (Invitrogen); FastPrep (MP Biochemicals) (2)
DASGIP bioreactors (2)
Illumina Genome Analyzer (2)
GenePix Professional 4200A [Axon Instruments] (2)
GenePix 4000A [Axon Instruments] (2)
Illumina Genome Analyzer II (2)
Ion Torrent Proton (2)
DNBSEQ-G400 (2)
Illumina HiSeq 1000 (2)
Agilent Tapestation 4200 (1)
ILMN DNA LP (M) Tagmentation (24 Samples, IPB) 20060060 (1)

Publication Date

2014 (123)
2011 (110)
2012 (103)
2010 (96)
2013 (90)
2025 (86)
2015 (84)
2016 (75)
2023 (67)
2026 (60)
2022 (56)
2024 (55)
2009 (55)
2008 (53)
2021 (52)
2020 (49)
2019 (37)
2018 (31)
2017 (31)
2007 (22)
2006 (13)
2005 (12)
2004 (5)

UNIPROT ID/AC

3880.AES58538 (6)
3880.AES58539 (6)
3880.AES58557 (6)
3880.AES58577 (6)
3880.AES58595 (6)
3880.AES58596 (6)
3880.AES58598 (6)
3880.AES58611 (6)
3880.AES58637 (6)
3880.AES58673 (6)
3880.AES58697 (6)
3880.AES58766 (6)
3880.AES58788 (6)
3880.AES58833 (6)
3880.AES58880 (6)
3880.AES58897 (6)
3880.AES58900 (6)
3880.AES58960 (6)
3880.AES58990 (6)
3880.AES59003 (6)
3880.AES59180 (6)
3880.AES59185 (6)
3880.AES59286 (6)
3880.AES59334 (6)
3880.AES59339 (6)
3880.AES59397 (6)
3880.AES59531 (6)
B0FMT3 (1)
Q5I3B1 (1)
Q9I999 (1)

ENSEMBL ID

ENSG00000229353 (3)
ENSG00000147251 (2)
ENSG00000170477 (2)
ENSG00000204131 (2)
ENSG00000247315 (2)

CHEBI ID

CHEBI:30769 (41)
CHEBI:16750 (38)
CHEBI:27897 (38)
CHEBI:17568 (37)
CHEBI:7916 (37)
CHEBI:15741 (36)
CHEBI:16704 (36)
CHEBI:17368 (36)
CHEBI:18257 (36)
CHEBI:25017 (36)
CHEBI:17596 (35)
CHEBI:15756 (34)
CHEBI:16335 (34)
CHEBI:28044 (34)
CHEBI:16737 (33)
CHEBI:17822 (32)
CHEBI:18186 (32)
CHEBI:18237 (32)
CHEBI:6650 (32)
CHEBI:15428 (31)
CHEBI:15891 (31)
CHEBI:16708 (31)
CHEBI:30915 (31)
CHEBI:25094 (30)
CHEBI:27266 (30)
CHEBI:28842 (30)
CHEBI:16449 (29)
CHEBI:16811 (29)
CHEBI:17154 (29)
CHEBI:18012 (29)

Metabolite Name

Uracil (21)
Adenine (20)
Adenosine (20)
Hypoxanthine (20)
Palmitic acid (20)
Uridine (20)
Creatinine (19)
Guanosine (18)
Ornithine (18)
Inosine (17)
Myristic acid (17)
Uric acid (17)
Citric acid (16)
Cytosine (16)
Phenylalanine (16)
Tryptophan (16)
Xanthine (16)
Arginine (15)
Choline (15)
Creatine (15)
Deoxycholic acid (15)
Guanine (15)
Leucine (15)
Linoleic acid (15)
Oleic acid (15)
Pantothenic acid (15)
Proline (15)
Riboflavin (15)
Stearic acid (15)
Taurine (15)

First Public Date

2014 (4)
2025 (3)
2021 (2)
2024 (1)
2019 (1)
2016 (1)

Modelling Approach

Ordinary differential equation model (2)

Lab affiliation

Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and BIOSS Centre for Biological Signalling Studies, University of Freiburg, 79104 Freiburg im Breisgau, Germany (5)
Pacific Northwest National Laboratory (5)
Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver V5Z 1L3, Canada. (4)
Biochemistry and Molecular Biology, Michael Smith Laboratories, University of British Columbia, Canada (3)
Institute for Research in Immunology and Cancer (IRIC) Université de Montréal, Department of Chemistry, Université de Montréal, MIL campus, Montréal, H2V 0B3, Canada (3)
North Carolina State University (3)
University of Greifswald, Institute for Microbiology, Department for Microbial Proteomics (3)
Burns and Trauma Research,School of Biomedical Sciences, Queensland University of Technology (2)
Department of Cell Biology, Harvard Medical School, Boston MA 02115 (2)
Faculty of Biology, Medicine & Health, Manchester Cell-Matrix Centre, Manchester Academic Health Science Centre, University of Manchester, Michael Smith Building, Oxford Road, Manchester, M13 9PT, United Kingdom (2)
Michael Smith Laboratories, University of British Columbia, Canada (2)
Nutrient Metabolism & Signalling Laboratory, Metabolism, Diabetes and Obesity Program, Biomedicine Discovery Institute, Monash University, Victoria 3800, Australia (2)
Proteomics (2)
Systems Biology Initiative, School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, New South Wales 2052, Australia (2)
The University of Melbourne (2)
University of Liverpool (2)
Wilmer Eye Institute, Smith Building, M015, 400 N. Broadway, Baltimore, MD 21287 (2)
lab (2)
1Lester and Sue Smith Breast Center and Dan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, TX 77030, USA (1)
1Nutrient Metabolism & Signalling Laboratory, Metabolism, Diabetes and Obesity Program, Biomedicine Discovery Institute, Monash University, Victoria 3800, Australia. 2Department of Biochemistry and Molecular Biology, School of Biomedical Sciences, Faculty of Medicine, Nursing & Health Sciences, Monash University, Victoria 3800, Australia. (1)
1School of Biomedical Sciences and Pharmacy, College of Health, Medicine and Wellbeing, University of Newcastle, NSW, 2308, Australia 2 Precision Medicine Research Program, Hunter Medical Research Institute, New Lambton Heights, NSW, 2305, Australia (1)
95 Institut de Pharmacologie et de Biologie Structurale (IPBS), Université de Toulouse, CNRS, Université Toulouse III - Paul Sabatier (UT3), Toulouse, 31077, France (1)
Associate Professor, Department of Biomedical Sciences,Affiliated with The Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen (1)
Barts Cancer Institute, Queen Mary University of London, Charterhouse Square, London, EC1M 6BQ, UK. (1)
Bioinformatics Core, Weill Cornell Medicine-Qatar (1)
Bioinformatics, TruDiagnostic, USA (1)
Boston Children's Hospital (1)
COI-NDM Univesity of Oxford (1)
Cambridge Institute for Medical Research, University of Cambridge, Hills Road, Cambridge, CB2 0XY, UK (1)
Cambridge Institute of Therapeutic Immunology and Infectious Diseases, Department of Medicine, University of Cambridge, (1)

IsPrivate

False (2)

Modification

N6-dimethyl-L-lysine (2)
Not available (2)
15.994915 (1)
57.021464 (1)
6x(2)H labeled dimethylated L-arginine (1)
N6 (1)

Study type

Transcription profiling by array (510)
RNA-seq of coding RNA (153)
ChIP-seq (70)
Methylation profiling by high throughput sequencing (27)
Comparative genomic hybridization by array (22)
Methylation profiling by array (20)
Unknown experiment type (18)
RNA-seq of total RNA (17)
Transcription profiling by tiling array (14)
DNA-seq (14)
RNA-seq of coding RNA from single cells (13)
RNA-seq of non coding RNA (12)
Other (10)
ChIP-chip by tiling array (7)
ChIP-chip by array (7)
Genotyping by array (6)
High-throughput sequencing (5)
Transcription profiling by SAGE (4)
CUT&RUN (4)
Cell line - One-color microarray (3)
RNAi profiling by array (3)
Baseline (2)
MeDIP-seq (2)
Cell line - High-throughput sequencing (2)
ATAC-seq (2)
Ribo-seq (2)
MicroRNA profiling by array (2)
Genotyping by high throughput sequencing (2)
Transcription profiling by high throughput sequencing (1)
Cell line - Single-cell sequencing (1)

Release Date

2022 (816)
2023 (812)
2021 (789)
2025 (693)
2024 (687)
2020 (589)
2019 (567)
2015 (515)
2018 (480)
2016 (433)
2014 (429)
2017 (384)
2013 (355)
2012 (347)
2011 (333)
2010 (260)
2009 (183)
2026 (130)
2008 (116)
2007 (62)
2006 (34)
2005 (30)
2004 (18)
2002 (9)
2003 (7)
2000 (7)
1999 (5)
1998 (4)
2001 (3)
1997 (2)

Previous page
1 / 963
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 963
Next page

Sort by:

Relevance

Page size

The complete chloroplast genome sequence of Machilus robusta W. W. Smith (Lauraceae)

PRJNA714487 | ENA

The complete chloroplast genome of Primula tsiangii W. W. Smith (Primulaceae): a karst endemic primrose in Southwest China.

Not available

S-EPMC7706616 | biostudies-literature

A neo-W chromosome in a tropical butterfly links colour pattern, male-killing, and speciation.

Not available

S-EPMC4971206 | biostudies-literature

Patterns of dioxin-altered mRNA expression in livers of dioxin-sensitive versus dioxin-resistant rats

The dioxin congener 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) causes a wide range of toxic effects in rodent species, all of which are mediated by a ligand-dependent transcription-factor, the aryl hydrocarbon receptor (AHR). The Han/Wistar (Kuopio) (H/W) strain shows exceptional resistance to many ...

ORGANISM(S): Rattus norvegicus

2011-11-14 | E-GEOD-13513 | biostudies-arrayexpress

Molecular immunophenotyping of lungs and spleens in naive and vaccinated chickens early after pulmonary avian influenza A (H9N2) virus infection

In a respiratory-infection-model with the avian influenza A H9N2 virus, lung and splenic immune reactions in chickens were studied using a 5K chicken immuno-microarray. Groups of chickens were either mock-immunized (referred to as non-immune), vaccinated with inactivated viral antigen only (immune) ...

ORGANISM(S): Gallus gallus

2015-11-02 | E-MTAB-3999 | biostudies-arrayexpress

RNA sequencing reveals sexually dimorphic gene expression before gonadal differentiation in chicken and allows comprehensive annotation of the W-chromosome.

Not available

S-EPMC4053838 | biostudies-literature

First-Principles Estimation of Core Level Shifts for Hf, Ta, W, and Re.

Not available

S-EPMC9169058 | biostudies-literature

THE 2017 13^TH ANNUAL DAVID W. KENNEDY, MD, LECTURE The evolution of outcomes in sinus surgery for chronic rhinosinusitis: past, present, and future.

Not available

S-EPMC5716851 | biostudies-literature

Analgesic neuropeptide W suppresses seizures in the brain revealed by rational repositioning and peptide engineering.