Song J J - OmicsDI

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Unknown (30690)
Proteomics (606)
Transcriptomics (169)
Genomics (91)
Metabolomics (51)
Models (5)
Other (2)
Genomic (1)
Multiomics (1)

Organisms

Homo sapiens (254)
Mus musculus (101)
Rattus norvegicus (12)
Zea mays (9)
Arabidopsis thaliana (6)
Escherichia coli (5)
Oryza sativa (3)
Oryza sativa Japonica Group (3)
Macaca mulatta (2)
Gallus gallus (2)
Drosophila melanogaster (2)
Acipenser transmontanus (1)
Pseudopodoces humilis (1)
Rhodococcus opacus (1)
Vitis labrusca x Vitis vinifera (1)
Trichinella spiralis (1)
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Gossypium barbadense (1)
Burkholderia ambifaria (1)
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Bos taurus (1)

Organisms

Borreliella burgdorferi WI91-23 (1)
Peribacillus psychrosaccharolyticus (1)
Yersinia pestis (1)

Repository

pride (370)
biostudies-arrayexpress (199)
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Tissue

Cell culture (109)
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Disease

Disease free (14)
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Not Available (2)
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Alzheimer's disease (1)
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Brain glioblastoma multiforme (1)
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Chronic myeloid leukemia (1)
Depression (1)
Diastolic heart failure (1)
Duchenne muscular dystrophy (1)
End stage renal disease (1)
Esophagus squamous cell carcinoma (1)

Technology Type

Mass Spectrometry (370)
Shotgun proteomics (183)
Bottom-up proteomics (48)
Mass spectrometry (42)
Affinity purification coupled with mass spectrometry proteomics (42)
Gel-based experiment (38)
Data-dependent acquisition (25)
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Data-independent acquisition (20)
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Illumina HiSeq 2000 (4)
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Chemical cross-linking coupled with mass spectrometry proteomics (3)
Illumina HiSeq 2000, ILLUMINA (2)
All-ion fragmentation (2)
Mass spectrometry imaging (2)
ILLUMINA, Illumina HiSeq 2000 (1)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
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HDMSE (1)
Immunopeptidomics (1)
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SRM/MRM (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (16)
Liquid Chromatography MS - negative - reverse phase (15)
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Computer (1)
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MaXis (1)
MaXis II (1)
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QSTAR (1)
SolariX (1)
TimsTOF Pro (1)
Xevo G2-S QTof (1)

Publication Date

2025 (95)
2022 (87)
2023 (77)
2024 (73)
2021 (65)
2015 (34)
2018 (33)
2020 (33)
2026 (32)
2019 (30)
2013 (28)
2012 (28)
2014 (27)
2010 (27)
2016 (23)
2017 (21)
2011 (19)
2007 (7)
2009 (6)
2008 (5)
2005 (3)
2004 (2)
2006 (1)

UNIPROT ID/AC

A0A024RC46 (2)
A0A0A0MR66 (2)
A0A0A0MSA7 (2)
A0A0C4DG89 (2)
A0FGR8 (2)
A0FGR8-2 (2)
A0FGR8-6 (2)
A5A3E0 (2)
B1AKZ5 (2)
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B4DY08 (2)
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E7EVA0 (2)
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G5E972 (2)
G8JLB6 (2)
H0Y612 (2)
H0YAC7 (2)
H0YFY6 (2)
H0YJH7 (2)
H0YM50 (2)
H7BXH2 (2)
I3L2J0 (2)
I3L4N8 (2)
J3KPF3 (2)

ENSEMBL ID

ENSG00000147251 (1)

CHEBI ID

CHEBI:15741 (17)
CHEBI:18012 (16)
CHEBI:27266 (15)
CHEBI:15354 (15)
CHEBI:30769 (15)
CHEBI:15428 (14)
CHEBI:16865 (13)
CHEBI:32816 (13)
CHEBI:7916 (13)
CHEBI:26271 (12)
CHEBI:16811 (12)
CHEBI:16449 (12)
CHEBI:16027 (12)
CHEBI:6650 (11)
CHEBI:17568 (11)
CHEBI:17154 (11)
CHEBI:17822 (10)
CHEBI:26986 (10)
CHEBI:28300 (10)
CHEBI:17748 (10)
CHEBI:25017 (10)
CHEBI:30763 (10)
CHEBI:16704 (10)
CHEBI:17750 (10)
CHEBI:15891 (10)
CHEBI:18183 (10)
CHEBI:28842 (10)
CHEBI:55474 (1)
CHEBI:56080 (1)
CHEBI:61448 (1)

Metabolite Name

Proline (7)
Guanine (7)
Glycine (7)
Valine (7)
Choline (7)
Pyruvic acid (7)
Fumaric acid (7)
Uridine (6)
Inosine (6)
Methionine (6)
Valine (6)
AMP (6)
Uracil (6)
UMP (6)
Taurine (6)
DTMP (6)
Citric acid (6)
Succinic acid (6)
Alanine (6)
Methylmalonic acid (6)
Uric acid (6)
Creatinine (6)
Glucose-6-phosphate (5)
Cholesterol (5)
Glycine (5)
Thymine (5)
Serine (5)
Nicotinamide (5)
Hypoxanthine (5)
Guanosine (5)

First Public Date

2026 (1)
2021 (1)
2014 (1)
2013 (1)

Modelling Approach

Ordinary differential equation model (4)

Lab affiliation

Bioplatforms Australia (7)
Affiliated Eye Hospital of Shandong University of Traditional Chinese Medicine (5)
Department of Convergence Medicine, Convergence Medicine Research Center/Biomedical Research Center, Asan Medical Center, Asan Institute for Life Sciences, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul 05505, Republic of Korea. (5)
Alkali Soil Natural Environmental Science Center, Northeast Forestry University, Key Laboratory of Saline-alkali Vegetation Ecology Restoration in Oil Field, Ministry of Education, Harbin 150040, China (4)
Center of Molecular and Cellular Oncology, Yale University (4)
Peking University (4)
Tsinghua University, China (4)
Institute for Biochemistry, University of Cologne (3)
Medical Basic Research Innovation Center for Cardiovascular and Cerebrovascular Diseases, Ministry of Education, Nanjing Medical University, Nanjing, Jiangsu, China (3)
State Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Sun Yat-sen University Cancer Center, Guangzhou, 510060, China (3)
Yazhouwan National Laboratory, Sanya 572024, China (3)
Alkali Soil Natural Environmental Science Center, Northeast Forestry University, Harbin 150040, China (2)
Baylor College of Medicine (2)
Beijing Key Laboratory of Maize DNA Fingerprinting and Molecular Breeding, Maize Research Center, Beijing Academy of Agriculture and Forestry Sciences (BAAFS), Beijing, 100097, China (2)
Center for Natural Product Systems Biology, Korea Institute of Science and Technology (2)
Chinese Academy of Sciences Shanghai Institute of Materia Medica (2)
College of Horticulture, Hunan Agricultural University (2)
Daegu Catholic University School of Medicine (2)
Department of Cardiology, Renmin Hospital of Wuhan University, Wuhan 430060, China (2)
Department of Life Science (2)
Department of Life Sciences, Korea University, Seoul 02841, Korea (2)
Department of Life Sciences, Pohang University of Science and Technology (POSTECH), Pohang, Republic of Korea (2)
Department of Ophthalmology, Beijing Key Laboratory of Restoration of Damaged Ocular Nerve, Peking University Third Hospital, Beijing, China (2)
Department of Pharmaceutical Biotechnology, Institute of Pharmacy, University of Greifswald, Germany (2)
Department of pathophysiology, School of Basic Medical Sciences, Wuhan University, Wuhan 430071, China (2)
Huazhong Agricultural University (2)
Nanjing Agricultural University (2)
New Cornerstone Science Laboratory, State Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Sichuan Agricultural University, Chengdu, China (2)
Proteomics core facility, Biomedical Research Institute, Seoul National University Hospital (2)
School of Optometry, The Hong Kong Polytechnic University (2)

IsPrivate

False (4)

Classification

bacteria (2)

Modification

15.994915 (2)
-17.026549 (1)
-18.010565 (1)
57.021464 (1)

Study type

Transcription profiling by array (83)
RNA-seq of coding RNA (42)
ChIP-seq (23)
ChIP-chip by tiling array (10)
Comparative genomic hybridization by array (9)
Methylation profiling by high throughput sequencing (6)
RNA-seq of non coding RNA (5)
Unknown experiment type (4)
Genotyping by array (4)
Methylation profiling by array (4)
Other (2)
Transcription profiling by SAGE (1)
Animal - High-throughput sequencing (1)
RNAi profiling by array (1)
Bisulfite-seq (1)
MicroRNA profiling by array (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2025 (4758)
2022 (4044)
2023 (3841)
2024 (3675)
2021 (3252)
2020 (2369)
2019 (1667)
2018 (1468)
2017 (1198)
2016 (1053)
2015 (817)
2026 (660)
2014 (585)
2013 (386)
2012 (302)
2011 (247)
2010 (179)
2009 (123)
2008 (103)
2007 (46)
2006 (39)
2005 (22)
2004 (18)
2003 (12)
2002 (9)
2001 (8)
2000 (5)
1999 (1)
1998 (1)

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Receptor-mediated recruitment of cytosolic J-proteins to the mitochondrial outer membrane promotes assembly of preprotein translocases

Mitochondria possess elaborate machineries for the import of preproteins from the cytosol. Cytosolic factors like Hsp70 chaperones and their co-chaperones, the J-proteins, guide preproteins to the mitochondrial surface. The translocase of the mitochondrial outer membrane (TOM) forms the entry gate f...

ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast)

2018-11-26 | PXD008203 | Pride

The Manchurian Walnut Genome: Insights into Juglone and Lipid Biosynthesis

BACKGROUND: Manchurian walnut (Juglans mandshurica Maxim.) is a tree with multiple industrial uses and medicinal properties in the Juglandaceae family (walnuts and hickories). J. mandshurica produces juglone, which is a toxic allelopathic agent and has potential utilization value...

2022-05-18 | MTBLS3657 | MetaboLights

Recruitment of Cytosolic J-Proteins by TOM Receptors Promotes Mitochondrial Protein Biogenesis.

Not available

S-EPMC6280124 | biostudies-literature

Knockout of p53 leads to a significant increase in ALV-J replication.

Not available

S-EPMC8377548 | biostudies-literature

Site-specific silencing of regulatory elements as a mechanism of X-inactivation

The inactive X chromosome’s (Xi) physical territory is microscopically devoid of transcriptional hallmarks and enriched in silencing-associated modifications. How these microscopic signatures relate to specific Xi sequence is unknown. This study reports the profiling of Xi gene expression and chroma...

ORGANISM(S): Mus musculus

2012-11-21 | E-GEOD-39406 | biostudies-arrayexpress

Exosome-mediated delivery of RBP-J decoy oligodeoxynucleotides ameliorates hepatic fibrosis in mice.

Not available

S-EPMC8825583 | biostudies-literature

Antiviral Activity against Avian Leucosis Virus Subgroup J of Degraded Polysaccharides from Ulva pertusa.

Not available

S-EPMC6098872 | biostudies-literature

Case Report: J-Shaped External Fixator for Treatment of Mayo Type II Olecranon Fractures - A Novel Surgical Technique and Report of Clinical Applications.

Not available

S-EPMC9240390 | biostudies-literature

ALV-J inhibits autophagy through the GADD45β/MEKK4/P38MAPK signaling pathway and mediates apoptosis following autophagy.