Song Shan S - OmicsDI

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Unknown (258)
Proteomics (6)
Transcriptomics (3)
Metabolomics (2)
Genomics (1)

Organisms

Homo sapiens (6)
Mus musculus (2)
Escherichia coli (1)
Aerococcus urinae NBRC 15544 = CCUG 36881 (1)
Alteromonadales (1)
Bacteria (1)
Canis lupus familiaris (1)
Carya cathayensis (1)
Cnidaria (1)
Ectopseudomonas oleovorans CECT 5344 (1)
Ensifer adhaerens (1)
Enterococcus faecalis (1)
Globicatella sanguinis (1)
Halictus scabiosae (1)
Histomonas meleagridis (1)
Human immunodeficiency virus 1 (1)
Mesocricetus auratus (1)
Methylohalobius crimeensis 10Ki (1)
Mus musculus (1)
Olavius algarvensis sulfate-reducing endosymbiont (1)
Ophrys garganica (1)
Ophrys sphegodes (1)
Pseudomonas aeruginosa SJTD-1 (1)
Rabies virus Nishigahara RCEH (1)
Rattus norvegicus (1)
Rattus rattus (1)
Rhodococcus jostii RHA1 (1)
Rhodopseudomonas palustris (1)
Schizosaccharomyces pombe 927 (1)
Staphylococcus aureus (1)

Repository

iProX (5)
biostudies-arrayexpress (3)
MetaboLights (2)
EGA (1)
pride (1)

Tissue

Cell culture (1)
Stem cell (1)

Disease

Brain glioblastoma multiforme (1)

Technology Type

Mass spectrometry (2)
Mass Spectrometry (1)
Proteogenomics (1)

Instrument Platform

Liquid Chromatography MS - (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2017 (1)
2016 (1)
2014 (1)
2023 (1)
2020 (1)
2026 (1)
2021 (1)
2025 (1)

CHEBI ID

CHEBI:167251 (1)
CHEBI:183962 (1)
CHEBI:167296 (1)
CHEBI:85864 (1)
CHEBI:183810 (1)
CHEBI:141598 (1)
CHEBI:167312 (1)
CHEBI:167264 (1)
CHEBI:156124 (1)
CHEBI:141596 (1)
CHEBI:167253 (1)
CHEBI:166947 (1)
CHEBI:167257 (1)
CHEBI:166944 (1)
CHEBI:166913 (1)
CHEBI:167241 (1)
CHEBI:132542 (1)
CHEBI:131427 (1)
CHEBI:85759 (1)
CHEBI:85760 (1)
CHEBI:133629 (1)
CHEBI:18160 (1)
CHEBI:46245 (1)
CHEBI:167303 (1)
CHEBI:167299 (1)
CHEBI:167298 (1)
CHEBI:72513 (1)
CHEBI:167265 (1)
CHEBI:131428 (1)
CHEBI:166945 (1)

Metabolite Name

Sphingomyelin d38:1 (SM d38:1) (1)
Sphingomyelin d34:1 (SM d34:1) (1)
Sphingomyelin d42:2 (SM d42:2) (1)
Sphingomyelin d36:1 (SM d36:1) (1)
Sphingomyelin d42:1 (SM d42:1) (1)
Sphingomyelin d42:3 (SM d42:3) (1)
Sphingomyelin d38:2 (SM d38:2) (1)
Sphingomyelin d37:1 (SM d37:1) (1)
PG(18:1_18:2) (1)
PE(18:0_18:1) (1)
PE(20:0_20:4) (1)
Desethylamiodarone (1)
Ser-Ala-Lys-Asp-Met (1)
Luminol (1)
Leu-Arg-Leu (1)
(2-{[3-(3,4-Dihydroxy-5-methoxyphenyl)prop-2-enoyl]oxy}ethyl)trimethylazanium (1)
Glandicoline A (1)
3-(5'-Methylthio)pentylmalic acid (1)
2-Linoleoylglycerol-1,3-di-O-glucoside (1)
2-Oxo-4-phosphonobutyrate (1)
Phenazine-1,6-dicarboxylate (1)
Nitrogen mustard N-oxide (1)
GlcNAc1-3Gal1-4GlcNAcSp (1)
[(2-amino-4-oxo-6-sulfanyl-7-sulfido-1,5,5a,8,9a,10-hexahydropyrano[3,2-g]pteridin-8-yl)methoxy-oxidophosphoryl] [5-(6-amino-7H-purin-9-ium-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl phosphate (1)
1-(9Z,12Z,15Z-octadecatrienoyl)-2-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sn-glycerol (1)
Asp-Gln-Thr-Lys (1)
LPS(18:3) (1)
3-Oxazolidinecarboxylic acid, 2,2-dimethyl-4-(1-oxo-2-hexadecyn-1-yl)-, 1,1-dimethylethyl ester, (4S)- (1)
6-{4-[6-(3,4-dihydroxy-6-methyl-5-oxooxan-2-yl)-5,7-dihydroxy-4-oxo-4H-chromen-2-yl]-2-hydroxyphenoxy}-3,4,5-trihydroxyoxane-2-carboxylic acid (1)
N-Acetyl-leu-leu-leu-leu-leu-tyr-amide (1)

Study type

Transcription profiling by array (2)
RNA-seq of coding RNA (1)

Release Date

2025 (57)
2022 (43)
2021 (35)
2023 (29)
2024 (28)
2020 (17)
2019 (13)
2016 (11)
2017 (7)
2014 (5)
2026 (5)
2018 (5)
2015 (4)
2013 (1)
2009 (1)

Lab affiliation

Nanjing Medical University (1)

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Differentiation of human embryonic stem cells towards hepatocytes

To understand in detail the molecular phases that occur during the differentiation of human embryonic stem cells to hepatocyte-like cells we performed an RNA-seq time course of the stages of differentiation across the 21 day differentiation time course. We used a chemically defined (serum-free) prot...

ORGANISM(S): Homo sapiens

2017-04-28 | E-GEOD-70741 | biostudies-arrayexpress

Mks6 mutations reveal tissue- and cell type-specific roles for the cilia transition zone.

Not available

S-EPMC6355093 | biostudies-literature

Hybrid Antimicrobial Peptide Targeting Staphylococcus aureus and Displaying Anti-infective Activity in a Murine Model.

Not available

S-EPMC7516806 | biostudies-literature

The mechanisms of human hotdog-fold thioesterase 2 (hTHEM2) substrate recognition and catalysis illuminated by a structure and function based analysis.

Not available

S-EPMC2929599 | biostudies-literature

Identification of Glutathione S-Transferase Genes in Hami Melon (Cucumis melo var. saccharinus) and Their Expression Analysis Under Cold Stress.