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ProteomicsExpanding the MAPPs assay to accommodate MHC-II pan re-ceptors for improved predictability of potential T cell epitopes
The appended raw files, csv files and other documents were deposited in the public domain in support for the publication "Expanding the MAPPs assay to accommodate MHC-II pan re-ceptors for improved predictability of potential T cell epitopes" by Katharina Hartman, Guido Steiner, Michel Siegel, Cary ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2023-08-25 | MSV000092747 | MassIVE
TranscriptomicsNative Elongating Transcript sequencing (NET-seq) in wild-type and three members of the CAF-I complex.
We performed a fluorescent reporter based screen to identify factors determining transcriptional directionality from bidirectional promoters that give rise to a coding and a non-coding transcript. Promoters like these are most frequent in many organisms and non-coding transcription from this origin ...
ORGANISM(S): Saccharomyces cerevisiae 
2014-06-01 | E-GEOD-55982 | biostudies-arrayexpress
TranscriptomicsDirect measurement of heritable gene expression within single individuals from wild populations.
Heritable variation in gene expression has been largely studied in model organisms by taking advantage of pure and inbred lines. Comparative studies on organisms with contrasting evolutionary history, population size and genome architecture have been hindered by practical considerations, as many of ...
ORGANISM(S): Picea glauca 
2012-11-30 | E-GEOD-35337 | biostudies-arrayexpress
TranscriptomicsZea mays Transcriptome or Gene expression
Gene transcription is an essential step of gene function and transcriptome variation is of agronomical, ecological and evolutionary importance. To explore global expression patterns and dissect the underlying genetic mechanisms are important scientific inquires which are still largely unknown, espec...
ORGANISM(S): Zea mays 
2013-01-30 | E-MTAB-4227 | biostudies-arrayexpress
TranscriptomicsGene Expression between two cell layers in maize shoot apical meristem
All above ground organs of higher plants are ultimately derived from shoot apical meristems (SAMs). The SAM exhibits distinctive structural organization, and monocot SAMs such as maize are comprised of two cell layers, a single cell layered tunica (L1) and a corpus (L2). Although recent research ha...
ORGANISM(S): Zea mays 
2013-01-28 | E-GEOD-16868 | biostudies-arrayexpress
TranscriptomicsRegulation of Gene Expression and Parent-of-Origin Effects in Maize Hybrids
Heterosis (hybrid vigor) refers to the superior performance of hybrid progeny relative to their parents. Although widely exploited in agriculture, the mechanisms responsible for heterosis are not well understood. As a monoecious organism, a given maize plant can be used as both male and female par...
ORGANISM(S): Zea mays 
2009-11-20 | E-GEOD-16136 | biostudies-arrayexpress
TranscriptomicsThe maize leaf transcriptome
We have generated over 80 million 32 nt reads generated from RNA samples isolated from the tip and base of a developing Mo17 leaf. A comparision of these data with the maize AGP resulted in the confirmation of approximately 88% of the maize filtered gene set Keywords: Transcriptome analysis Examin...
ORGANISM(S): Zea mays 
2009-08-15 | E-GEOD-16916 | biostudies-arrayexpress
UnknownEfficacy and Safety of Degludec versus Glargine in Type 2 Diabetes.
Not available
S-EPMC5731244 | biostudies-literature
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