Srinivasan A A - OmicsDI

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Unknown (2813)
Proteomics (52)
Transcriptomics (43)
Genomics (15)
Metabolomics (3)
Models (2)

Organisms

Homo sapiens (44)
Mus musculus (31)
Rattus norvegicus (6)
Aeromonas hydrophila subsp. hydrophila ATCC 7966 (3)
Danio rerio (2)
Pseudomonas putida KT2440 (2)
Panagrellus redivivus (1)
Cicer arietinum (1)
Caulobacter vibrioides (1)
Sorghum bicolor (1)
Citrus sinensis (1)
Schizosaccharomyces pombe (1)
Saccharomyces cerevisiae (1)
Escherichia coli str. K-12 substr. MG1655 (1)
Arabidopsis thaliana (1)
Vibrio alginolyticus 40B (1)
Bos taurus (1)
Entamoeba histolytica (1)
Escherichia coli (1)
Mycobacterium tuberculosis H37Rv (1)
Staphylococcus pasteuri (1)

Organisms

Homo sapiens (2)
Pseudomonadaceae bacterium NAS3 (1)
Bos taurus (1)
Mus musculus (1)

Repository

biostudies-arrayexpress (51)
pride (41)
MassIVE (5)
ENA (5)
iProX (4)
BioModels (2)
EGA (2)
MetaboLights (2)
GNPS (1)
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PeptideAtlas (1)

Tissue

Myotube (6)
Skeletal muscle (6)
Cell culture (3)
Brain (2)
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Epithelial cell (1)
Erythrocyte (1)
Eye (1)
Eye trabecular meshwork (1)
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Keratinocyte (1)
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Muscle (1)
Myoblast (1)
Saliva (1)
Skeletal muscle myoblast in skeletal muscle (1)
Skeletal muscle tissue (1)
Sperm (1)
Stem cell (1)
Testis (1)
Tibia (1)

Disease

Alcoholic liver cirrhosis (5)
Skeletal muscle atrophy (2)
MAS (1)
Bacterial vaginosis (1)
Bone osteosarcoma (1)
Breast cancer (1)
Glaucoma (1)
Kidney cancer (1)
Liver cirrhosis (1)
Liver disease (1)
Male infertility (1)
Neck carcinoma (1)
Tuberculosis (1)

Technology Type

Mass Spectrometry (41)
Shotgun proteomics (24)
Bottom-up proteomics (11)
Gel-based experiment (4)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
Mass spectrometry (2)
Data-independent acquisition (2)
ILLUMINA, Illumina HiSeq 2500 (1)
All-ion fragmentation (1)
HDMSE (1)
Top-down proteomics (1)

Instrument Platform

Q Exactive Plus (3)
Q Exactive (2)
LTQ Orbitrap (1)
Orbitrap Fusion Lumos (1)
Direct infusion MS - positive (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)
LTQ Orbitrap Velos (1)

Publication Date

2025 (15)
2021 (12)
2015 (10)
2010 (10)
2013 (7)
2012 (7)
2022 (6)
2016 (6)
2023 (6)
2014 (5)
2011 (5)
2026 (4)
2008 (2)
2020 (2)
2024 (2)
2019 (2)
2018 (2)
2017 (1)
2009 (1)
2004 (1)

UNIPROT ID/AC

O75582 (1)
O75676 (1)
P17612 (1)
P25963 (1)
P28482 (1)
P29965 (1)
P37231 (1)
P42212 (1)
P68400 (1)
Q13547 (1)
Q15759 (1)
Q99558 (1)
Q9NNX6 (1)
Q9NQ31 (1)
Q9NYS0 (1)
Q9UHD2 (1)
Q9Y297 (1)

CHEBI ID

CHEBI:138368 (2)
CHEBI:15354 (2)
CHEBI:15428 (2)
CHEBI:15611 (2)
CHEBI:15676 (2)
CHEBI:15724 (2)
CHEBI:15891 (2)
CHEBI:15999 (2)
CHEBI:16010 (2)
CHEBI:16344 (2)
CHEBI:16411 (2)
CHEBI:16449 (2)
CHEBI:16530 (2)
CHEBI:16543 (2)
CHEBI:16610 (2)
CHEBI:16675 (2)
CHEBI:16708 (2)
CHEBI:16737 (2)
CHEBI:16742 (2)
CHEBI:16797 (2)
CHEBI:16811 (2)
CHEBI:16919 (2)
CHEBI:16958 (2)
CHEBI:169985 (2)
CHEBI:17084 (2)
CHEBI:17126 (2)
CHEBI:17234 (2)
CHEBI:17368 (2)
CHEBI:17418 (2)
CHEBI:17533 (2)

Metabolite Name

(R)-3-hydroxybutyrylcarnitine (1)
1,3-Diaminopropane (1)
1-Methylnicotinamide (1)
1-linoleoyl-GPA (18:2)* (1)
1-methyl-4-imidazoleacetate (1)
1-methylhistidine (1)
1-methylnicotinamide (1)
12,13-DiHOME (1)
16a-hydroxy DHEA 3-sulfate (1)
2'-O-methylcytidine (1)
2'-O-methyluridine (1)
2'-deoxyuridine (1)
2,3-dihydroxyisovalerate (1)
2,5-Furandicarboxylic acid (1)
2,6-dihydroxybenzoic acid (1)
2-Hydroxy-2-methylbutyric acid (1)
2-Hydroxy-3-methylvaleric acid (1)
2-Hydroxybutyric acid (1)
2-Hydroxyisobutyric acid (1)
2-Hydroxyisovaleric acid (1)
2-Hydroxyphenylacetic acid (1)
2-Methylhippuric acid (1)
2-Oxoisocaproic acid (1)
2-aminoadipate (1)
2-aminobutyrate (1)
2-aminoheptanoate (1)
2-aminooctanoate (1)
2-aminophenol sulfate (1)
2-hydroxy-3-methylvalerate (1)
2-hydroxyacetaminophen sulfate* (1)

IsPrivate

False (2)

First Public Date

2026 (3)
2023 (2)

Modelling Approach

Ordinary differential equation model (1)
Other (1)

Study type

Transcription profiling by array (28)
ChIP-seq (7)
RNA-seq of coding RNA (7)
Methylation profiling by array (2)
Unknown experiment type (1)
ChIP-chip by tiling array (1)
ChIP-chip by array (1)
Comparative genomic hybridization by array (1)
Other (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

2023 (286)
2025 (281)
2021 (279)
2024 (233)
2022 (228)
2020 (209)
2019 (168)
2018 (168)
2017 (143)
2012 (126)
2015 (121)
2013 (115)
2016 (114)
2014 (102)
2011 (63)
2010 (54)
2008 (42)
2009 (38)
2026 (32)
2007 (19)
2006 (12)
2005 (12)
2004 (7)
2003 (3)
2002 (3)
2001 (2)
1999 (2)
2000 (1)
1998 (1)

Lab affiliation

Department of Inflammation and Immunity, Gastroenterology and Hepatology. Cleveland Clinic, Cleveland Ohio, USA (8)
Department of Inflammation and Immunity, Gastroenterology and Hepatology. Cleveland Clinic, Cleveland Ohio (3)
1. School of Biological Sciences, National Institute of Science Education and Research, Bhubaneswar – 752050, India 2. Homi Bhabha National Institutes (HBNI), Training School Complex, Anushakti Nagar, Mumbai, India 400094 (1)
9McKusick-Nathans Institute of Genetic Medicine, 10Departments of Biological Chemistry, and 11Pathology, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA. (1)
Ashoka University, Rajiv Gandhi Education City Sonipat, Haryana, India – 131029 (1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) School of Life Sciences Technical University Munich (TUM) Gregor-Mendel-Straße 4 85354 Freising GERMANY Bavarian Center for Biomolecular Mass Spectrometry Technische Universität München Gregor-Mendel-Straße 4 85354 Freising DEUTSCHLAND / GERMANY (1)
Breast Center - Lewis, Baylor College of Medicine, Houston TX US (1)
Cambridge Institute for Medical Research, Hills Road, Cambridge, CB2 0XY (1)
Department of Animal Science, Bharathidasan University, Tiruchirappalli, India (1)
Department of Animal Science, Bharathidasan University, Tiruchirappalli, Tamil Nadu, India. (1)
Department of Biological Sciences, Kent State University, Kent, OH, United States. (1)
Department of Chemistry, Pennsylvania State University (1)
Department of Dermatology, Stanford School of Medicine, Stanford University (1)
Department of Gastroenterology, Hepatology & Nutrition, Cleveland Clinic (1)
Departments of Pediatrics and Genetics, Stanford University, Stanford, CA, USA. (1)
Fred Hutchinson Cancer Center, Seattle WA, USA (1)
ITC Life Sciences and Technology Center 3, 1st Main Road, 1st Phase, Peenya, Bangalore. 560058. India. (1)
Institue of Bioinformatics Discoverer Building, 7th Floor International Tech Park Whitefield, Bangalore - 560 066 Karnataka, India. (1)
James McGill Professor of Neurology and Neurosurgery and Anatomy and Cell Biology Montreal Neurological Institute-Hospital McGill, Montreal CANADA (1)
LV Prasad Eye Institute,MTC campus, Patia,Bhubaneswar, India (1)
Lab no.3011,Department of Biophysics, All India Institute of Medical Sciences, New Delhi (1)
Lerner Research Institute, Cleveland Clinic, Cleveland, OH 44195, USA (1)
Massachusetts Institute of Technology, Department of Biological Engineering, David H Koch Institute for Integrative Cancer Research (1)
McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University, Baltimore, Maryland 21205 USA (1)
Program in Epithelial Biology, Stanford University-School of Medicine, Stanford, CA 94305 USA (1)
Proteomics Program Blegdamsvej 3 2200 København N Bygning 6 Building: 06-2-36 (1)
Staff Scientist Biological Systems & Engineering Division Lawrence Berkeley National Laboratory Berkeley CA 94720 (1)
Staff Scientist VII Signal Transduction Lab-1, National Institute of Immunology, Aruna Asaf Ali Marg New Delhi-110067 (1)
Telethon Institute of Genetics and Medicine (TIGEM) Department of Translational Medicine, University of Naples "Federico II", Italy (1)
UCSF (1)

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xref:PubMed:42012889 (1)

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Impact of acute lymphoblastic leukemia induction therapy: findings from metabolomics on non-fasted plasma samples from a biorepository

INTRODUCTION: Acute lymphoblastic leukemia (ALL) is among the most common cancers in children. With improvements in combination chemotherapy regimens, the overall survival has increased to over 90%. However, the current challenge is to mitigate adverse events resulting from the c...

2021-08-12 | MTBLS2394 | MetaboLights

Facile and Economical Functionalized Hay Biochar with Dairy Effluent for Adsorption of Tetracycline.

Not available

S-EPMC7364554 | biostudies-literature

The genome and transcriptome of Panagrellus redivivus is shaped by the harsh demands of a free-living lifestyle

Nematodes comprise an abundant and diverse invertebrate phylum with members inhabiting nearly every ecological niche. Panagrellus redivivus (the M-bM-^@M-^YmicrowormM-bM-^@M-^Y) is a free-living nematode frequently used to understand the evolution of developmental and behavioral processes given its ...

ORGANISM(S): Panagrellus redivivus

2013-02-07 | E-GEOD-44020 | biostudies-arrayexpress

The marketing–finance interface: A new integrative review of metrics, methods, and findings and an agenda for future research

Not available

S-EPMC7501521 | biostudies-literature

Extracellular S100B inhibits A-type voltage-gated potassium currents and increases L-type voltage-gated calcium channel activity in dopaminergic neurons.

Not available

S-EPMC10738449 | biostudies-literature

A comparison of Web-based and small-group palliative and end-of-life care curricula: a quasi-randomized controlled study at one institution.

Not available

S-EPMC4340770 | biostudies-literature

Transcriptome profiling of Arabidopsis smg7 mutant in immune signaling blocked background

Goal of the study is the identification of transcriptome deregulation of smg7 pad4 mutants, which are deficient in nonsense-mediated mRNA decay and are blocked in immune signaling, which should avoid secondary responses from immune signaling Total RNA (ribosomal RNA depleted) illumina sequencing of ...

ORGANISM(S): Arabidopsis thaliana

2014-09-10 | E-GEOD-55884 | biostudies-arrayexpress

A gist of gastrointestinal stromal tumors: A review.

Not available

S-EPMC3708046 | biostudies-literature

Walking crowds on a shaky surface: stable walkers discover Millennium Bridge oscillations with and without pedestrian synchrony.

Not available

S-EPMC6227871 | biostudies-literature

A unified energy-optimality criterion predicts human navigation paths and speeds.

Not available

S-EPMC8307777 | biostudies-literature