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Unknown
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Genomics
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Models
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Organisms
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
(6)
Saccharomyces cerevisiae
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Aggregatibacter actinomycetemcomitans
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Fusobacterium nucleatum subsp. nucleatum ATCC 25586
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Gordonia sp. KTR9
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Thermoplasma acidophilum DSM 1728
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Psychrobacter arcticus 273-4
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Organisms
Streptococcus thermophilus
(34)
fermentation metagenome
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Lactiplantibacillus plantarum
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Pediococcus pentosaceus
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Lactococcus lactis subsp. lactis
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Halobacterium salinarum NRC-1
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Staphylococcus xylosus
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Chlamydomonas reinhardtii
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food fermentation metagenome
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Escherichia coli
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Staphylococcus carnosus subsp. carnosus TM300
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Streptococcus thermophilus ND03
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Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
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Leuconostoc mesenteroides subsp. cremoris TIFN8
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Lactococcus lactis subsp. lactis bv. diacetylactis str. TIFN4
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Lactococcus lactis subsp. lactis bv. diacetylactis str. TIFN2
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Lactococcus lactis subsp. lactis CV56
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Lacticaseibacillus paracasei ATCC 334
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Lactococcus cremoris subsp. cremoris TIFN3
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ENA
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biostudies-arrayexpress
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pride
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2012
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CHEBI ID
CHEBI:26271
(5)
CHEBI:28300
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CHEBI:28044
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CHEBI:27897
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CHEBI:6650
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Metabolite Name
Phenylalanine
(3)
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(2)
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IsPrivate
False
(2)
First Public Date
2024
(48)
2026
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2013
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(23)
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(22)
2023
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(16)
2020
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2018
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2014
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2016
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2017
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2015
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2019
(4)
Classification
bacteria
(42)
fungi
(1)
viruses
(1)
Modification
2x(15)N labeled L-lysine
(1)
Study type
Transcription profiling by array
(34)
RNA-seq of coding RNA
(8)
ChIP-chip by array
(2)
MNase-seq
(1)
Other
(1)
RNA-seq of total RNA
(1)
Release Date
2023
(61)
2022
(60)
2021
(50)
2020
(48)
2025
(43)
2018
(36)
2019
(35)
2024
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2017
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2015
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2012
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2014
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2013
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2010
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2008
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2009
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1998
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2005
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2007
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2002
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2000
(2)
2006
(1)
2003
(1)
Lab affiliation
Wageningen University
(2)
Institute for Plant Sciences, University of Cologne, 50674 Cologne, Germany
(1)
Department of Biochemistry & Molecular Biology Michigan State University
(1)
Department of Cell Biology, Harvard Medical School, USA
(1)
School of Biological Sciences, Georgia Institute of Technology, Atlanta, GA 30332
(1)
Department of Chemistry, T.C. Jenkins Department of Biophysics, Department of Biology, Johns Hopkins University
(1)
Department of Modeling of Biological Processes COS, Heidelberg University, Germany
(1)
Center for Biological Research (CIB-CSIC)
(1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS), Technical University Munich, Freising, Germany
(1)
Institute for Systems Biology, Seattle, WA, USA
(1)
Nutrition Program, School of Nutrition and Public Health, Oregon State University, Corvallis, OR, 97331
(1)
Department of Biology, Johns Hopkins University, Baltimore, MD 21218 USA
(1)
School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, New South Wales, Australia (lab head)
(1)
Department of Agricultural Chemistry, Edaphology and Microbiology, Microbiology area, Severo Ochoa building (C6), Agrifood Campus of International Excellence ceiA3, University of Córdoba, Córdoba, Spain
(1)
University of Southern California
(1)
Department of Biological Sciences, Ohio University
(1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) Technische Universität München (TUM) Gregor-Mendel-Straße 4 85354 Freising GERMANY
(1)
Institute of Biotechnology in Medicine, National Yang Ming University, Taipei, Taiwan, ROC
(1)
Tags
pathogen
(44)
pathogen:bacterium
(42)
xref:PubMed:23823494
(8)
xref:PubMed:17030793
(3)
xref:PubMed:17785531
(3)
xref:EuropePMC:PMC8776748
(3)
xref:EuropePMC:PMC7278722
(2)
xref:PubMed:26459565
(2)
xref:EuropePMC:PMC11973332
(2)
xref:EuropePMC:PMC10952461
(2)
xref:EuropePMC:PMC8324633
(2)
xref:EuropePMC:PMC7406220
(2)
xref:ArrayExpress:E-MTAB-4593
(1)
xref:PubMed:10532372
(1)
xref:PubMed:11337471
(1)
xref:PubMed:26903967
(1)
xref:PubMed:30374338
(1)
xref:PubMed:19233780
(1)
xref:PubMed:19060169
(1)
xref:PubMed:36477359
(1)
xref:PubMed:28163827
(1)
xref:EuropePMC:PMC5282782
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xref:PubMed:37089538
(1)
xref:PubMed:21131489
(1)
xref:PubMed:41528136
(1)
xref:PubMed:16741729
(1)
xref:PubMed:35927234
(1)
xref:PubMed:21460077
(1)
xref:PubMed:21148414
(1)
xref:PubMed:21275795
(1)
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starter culture-initiated cocoa fermentations
starter culture-initiated cocoa fermentations followed up trough metagenetics
PRJEB40850
|
ENA
Cite
Autochthonous starter culture for Salame Piemonte PGI production
Autochthonous starter culture for Salame Piemonte PGI production Metagenome
PRJNA669431
|
ENA
Cite
starter culture for artificial pit mud
starter culture for artificial pit mud Raw sequence reads
PRJNA449898
|
ENA
Cite
Endogenous starter culture and cheese
Endogenous starter culture and cheese metagenomes
PRJNA747701
|
ENA
Cite
Low-quality cocoa can overrule the effect of starter culture addition
Low-quality cocoa can overrule the effect of starter culture addition
PRJEB82871
|
ENA
Cite
Commercial bacterial culture concentrated starter "Profiline"
Commercial bacterial culture concentrated starter "Profiline" Metagenome
PRJNA900167
|
ENA
Cite
Sichuan paocai fermented by mixed-starter culture of lactic acid bacteria.
Not available
S-EPMC7590268
|
biostudies-literature
Cite
Proteolytic effect of starter culture during ripening of smoked horse sausage.
Not available
S-EPMC6049795
|
biostudies-literature
Cite
Mixed culture for home-fermentation of mead (melomel)
Metagenome and genome sequences from home-brewed mead starter culture (melomel)
PRJNA692457
|
ENA
Cite
Metabarcoding of starter culture
PRJNA1026371
|
ENA
Cite
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