Steffen D D - OmicsDI

Show results for

Unknown (366)
Transcriptomics (106)
Genomics (47)
Metabolomics (37)
Proteomics (23)
Models (9)

Organisms

Homo sapiens (90)
Mus musculus (22)
Arabidopsis thaliana (18)
Salmonella enterica subsp. enterica serovar Typhimurium (6)
Caenorhabditis elegans (5)
Candida albicans (4)
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (3)
Salmonella enterica subsp. enterica serovar Typhi (2)
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 (2)
Danio rerio (2)
Drosophila melanogaster (2)
cellular organisms (1)
Salmonella (1)
Salmonella enterica subsp. enterica serovar Paratyphi A (1)
Escherichia coli O157:H7 (1)
Nothobranchius furzeri (1)
Salmonella enterica (1)
Arabidopsis lyrata (1)
unidentified (1)
Aspergillus fumigatus (1)
Zea mays (1)
Salmo salar (1)
Rattus norvegicus (1)
Sus scrofa (1)
Escherichia coli (1)

Organisms

Mus musculus (1)

Repository

biostudies-arrayexpress (108)
EGA (45)
MetaboLights (37)
pride (15)
Cell Collective (6)
MassIVE (6)
BioModels (3)
jPOST (1)
ENA (1)

Tissue

Blood (3)
Bone marrow (3)
Myeloid cell (3)
Blood cell (2)
Cell culture (2)
Leukocyte (2)
Brain microvascular endothelial cell (1)
Epithelial cell (1)
Ovary (1)
Plant cell (1)
Prokaryotic cell (1)
Stem cell (1)
Tendon (1)
Wing disc (1)

Disease

Acute leukemia (3)
Acute myeloid leukemia (3)
Rheumatoid arthritis (1)
Ovarian carcinoma (1)

Technology Type

Mass spectrometry (30)
Mass Spectrometry (15)
Shotgun proteomics (9)
Mass spectrometry assay (6)
Illumina HiSeq 2000, Illumina_2.5M (2)
Affinity purification coupled with mass spectrometry proteomics (2)
Bottom-up proteomics (2)
Affymetrix 6.0 (1)
GeneChip HTA 2.0 (1)
Illumina 2.5M, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, unknown (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2500, Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
Gel-based experiment (1)
SRM/MRM (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (11)
Liquid Chromatography MS - negative - reverse phase (9)
MicrOTOF-Q II ESI-Qq-TOF (Bruker) (6)
Illumina NovaSeq X (5)
Illumina NovaSeq 6000 (5)
MaXis (Bruker) (4)
Illumina HiSeq 2000 (3)
Liquid Chromatography MS - negative - hilic (3)
Liquid Chromatography MS - positive - hilic (3)
MicrOTOF-Q I ESI-Qq-TOF (Bruker) (3)
Illumina Genome Analyzer II (2)
Illumina HiSeq 2500 (2)
LTQ Orbitrap Elite (2)
LTQ Orbitrap Velos (2)
5975C Series GC/MSD (Agilent) (2)
Gas Chromatography MS - Positive (GC-MS (Positive)) (2)
Affymetrix GeneChip(R) HT Scanner (1)
Affymetrix GeneChip Scanner 3000 7G (1)
418 [Affymetrix] (1)
NextSeq 2000 (1)
NextSeq 500 (1)
Q Exactive (1)
Q Exactive HF-X hybrid quadrupole-Orbitrap (1)
Q Exactive Plus (1)
TripleTOF 6600 (1)
Diode array detection MS - - - micrOTOF-Q II ESI-Qq-TOF (Bruker) (1)
Gas Chromatography MS - positive (1)
Gas Chromatography MS - positive - low-polarity (1)
Liquid Chromatography MS - - - micrOTOF-Q II ESI TOF (Bruker) (1)
Liquid Chromatography MS - - - micrOTOF-Q II ESI-Qq-TOF (Bruker) (1)

Publication Date

2013 (18)
2014 (16)
2026 (15)
2010 (14)
2024 (11)
2011 (11)
2020 (10)
2015 (10)
2022 (8)
2017 (7)
2025 (6)
2012 (6)
2021 (6)
2008 (5)
2007 (5)
2023 (4)
2004 (4)
2018 (4)
2019 (3)
2016 (2)
2009 (2)
2005 (2)
2006 (1)

CHEBI ID

CHEBI:16335 (10)
CHEBI:30769 (7)
CHEBI:16119 (6)
CHEBI:16828 (6)
CHEBI:16865 (6)
CHEBI:18186 (6)
CHEBI:27897 (6)
CHEBI:14314 (5)
CHEBI:15756 (5)
CHEBI:16704 (5)
CHEBI:16750 (5)
CHEBI:17351 (5)
CHEBI:17521 (5)
CHEBI:16065 (4)
CHEBI:16356 (4)
CHEBI:16414 (4)
CHEBI:16467 (4)
CHEBI:16708 (4)
CHEBI:16914 (4)
CHEBI:17154 (4)
CHEBI:17196 (4)
CHEBI:17895 (4)
CHEBI:17992 (4)
CHEBI:24266 (4)
CHEBI:25094 (4)
CHEBI:28527 (4)
CHEBI:28842 (4)
CHEBI:28875 (4)
CHEBI:78320 (4)
CHEBI:10642 (3)

Metabolite Name

AMP (3)
ATP (3)
Adenosine (3)
CDP-choline (3)
L-arginine (3)
L-asparagine (3)
L-glutamine (3)
L-proline (3)
L-threonine (3)
L-tryptophan (3)
L-valine (3)
1-benzopyrans (2)
1-deoxy-D-xylulose 5-phosphate (2)
1-hydroxy-2-unsubstituted benzenoids (2)
2-Aminoadipate (260) (2)
2-Isopropylmalate (275) (2)
3',5'-cyclic GMP (2)
3,5-dihydroxy-6-carbomethoxy-2-(3-methyl-2-butenyl)bibenzyl (2)
3-dehydroshikimate (2)
4-Aminobutanoate [GABA] (174) (2)
4-prenyldihydropinosylvin (2)
Acetylcholine (2)
Adenine (2)
Adenine (264) (2)
Adenosine (236) (2)
Aminomalonic acid (218) (2)
Anilides (2)
Benzene and substituted derivatives (2)
Benzenesulfonamides (2)
Benzenesulfonic acids and derivatives (2)

IsPrivate

False (3)

Submitter Keywords

Immuno-oncology (1)

First Public Date

2014 (1)

Modelling Approach

Ordinary differential equation model (2)
Logical model (1)

Study type

Transcription profiling by array (53)
RNA-seq of coding RNA (26)
RNA-seq of coding RNA from single cells (7)
Unknown experiment type (5)
ChIP-chip by array (2)
Comparative genomic hybridization by array (2)
Other (2)
Methylation profiling by array (2)
RAN-seq of total RNA from single cells (1)
ChIP-chip by tiling array (1)
Human - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
ATAC-seq (1)
ChIP-seq (1)
Proteomic profiling by array (1)
CUT&RUN (1)
RNA-seq of total RNA (1)

Release Date

2023 (48)
2022 (43)
2025 (35)
2014 (32)
2013 (31)
2021 (30)
2020 (27)
2018 (27)
2015 (25)
2024 (24)
2019 (22)
2016 (21)
2026 (20)
2010 (17)
2017 (15)
2011 (14)
2012 (10)
2007 (9)
2009 (7)
2008 (6)
2005 (4)
2004 (4)
2006 (3)

Lab affiliation

Institute for Genetics and Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Cologne, 50931, Germany (2)
Leibniz Institute of Plant Biochemistry Research Group Head Proteome Biology of Plant Interactions (2)
Bowel Cancer and Biomarker Laboratory School of Medical Sciences The University of Sydney (1)
Department of Peptide-based Immunotherapy (1)
Department of Proteomics and Signal Transduction. (1)
Director, Dept of Proteomics and Signal Transduction Max Planck Institute of Biochemistry (1)
Fraunhofer Institute for Interfacial Engineering and Biotechnology, Stuttgart, Germany (1)
Institute of Immunology, University Medical Center of the Johannes-Gutenberg University Mainz, Mainz, Germany (1)
Leibniz Institute of Plant Biochemistry Research Group Proteome Biology of Plant Interactions (1)
Mass Spectrometric Proteomics, Institute of Clinical Chemistry, University Medical Center Hamburg-Eppendorf. (1)
Max-Planck-Institute of Biochemistry, Munich, Germany (1)
MaxPlanck Insitute of Biochemistry Department of Proteomics and Signal transduction (1)
Target Discovery Institute, Nuffield Dept Medicine, University of Oxford, United Kingdom (1)

Tags

xref:PubMed:20679228 (1)

Previous page
1 / 59
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 59
Next page

Sort by:

Relevance

Page size

Transcription profiling of human TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide reveals Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response

In innate immune responses, activation of Toll-like receptors (TLRs) triggers direct antimicrobial activity against intracellular bacteria, which in murine, but not human, monocytes and macrophages is mediated principally by nitric oxide. We report here that TLR activation of human macrophages up-re...

ORGANISM(S): Homo sapiens

2008-06-17 | E-GEOD-8921 | biostudies-arrayexpress

Deep sequencing of endogenous mRNA from Caenorhabditis elegans in the presence of 2-deoxy-D-glucose (DOG) at 4 different time points

Background: C. elegans fed with a chemical inhibitor of glucose, namely 2-deoxy-D-glucose (DOG), exhibit considerably extended life span. DOG, in contradiction to D-glucose, cannot be metabolized in the glycolytic pathway. This results in the fact that less glucose is available for ATP production, a...

ORGANISM(S): Caenorhabditis elegans

2013-11-06 | E-GEOD-46344 | biostudies-arrayexpress

Gene expression profiling of mouse splenic Dendritic cells subsets

We describe a novel subset of CD8+ DCs in lymphoid organs of naïve mice characterized by expression of the CX3CR1 chemokine receptor. CX3CR1+CD8+ DCs lack hallmarks of classical CD8+ DCs, including IL12 secretion, the capacity to cross-present antigen and their developmental independence of the tran...

ORGANISM(S): Mus musculus

2010-07-28 | E-GEOD-23212 | biostudies-arrayexpress

RNA-seq of C.elegans and M.musculus in the presence and absence of D-Glucosamine (GlcN)

D-Glucosamine (2-amino-2-deoxy-D-glucose, C.A.S.# 3416-24-8) (GlcN) is a freely available and commonly used dietary supplement possibly promoting cartilage health in humans which also acts as an inhibitor of glycolysis. We here find that GlcN extends C. elegans lifespan by impairing glucose metaboli...

ORGANISM(S): Mus musculus

2014-03-07 | E-GEOD-54853 | biostudies-arrayexpress

Randomized Noninferiority Trial of Telephone Delivery of BRCA1/2 Genetic Counseling Compared With In-Person Counseling: 1-Year Follow-Up.

Not available

S-EPMC5012661 | biostudies-literature

In vivo evaluation of tumor uptake and bio-distribution of 99mTc-labeled 1-thio-β-D-glucose and 5-thio-D-glucose in mice model.

Not available

S-EPMC10980667 | biostudies-literature

Schittler2010 - Cell fate of progenitor cells, osteoblasts or chondrocytes

Schittler2010 - Cell fate of progenitor cells, osteoblasts or chondrocytes Mathematical model describing the mechanism of differentiation of mesenchymal stem cells to bone (osteoblasts) or cartilage (chondrocytes) cells. This model is described in...

2024-09-02 | BIOMD0000000493 | BioModels

Prevalence of Hepatitis B, C, and D in Germany: Results From a Scoping Review.

Not available

S-EPMC7493659 | biostudies-literature

Endoglin in liver fibrogenesis: Bridging basic science and clinical practice.

Not available

S-EPMC4050112 | biostudies-literature

Bite-angle bending as a key for understanding group-10 metal reactivity of d¹⁰-[M(NHC)₂] complexes with sterically modest NHC ligands.

Not available

S-EPMC5811130 | biostudies-literature