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TranscriptomicsMhyo IG Rnd vs MhRnd
Mycoplasma hyopneumoniae is the causative agent of porcine enzootic pneumonia and a major factor in the porcine respiratory disease complex. A clear understanding of the mechanisms of pathogenesis does not exist. The virulence factors of M. hyopneumoniae are largely unknown and are most probably com...
ORGANISM(S): Mycoplasma hyopneumoniae 
2010-06-30 | E-GEOD-17893 | biostudies-arrayexpress
MetabolomicsOceanographic setting influences the prokaryotic community and metabolome in deep-sea sponges
Marine sponges (phylum Porifera) are leading organisms for the discovery of bioactive compounds from nature. Their often rich and species-specific microbiota is hypothesised to be producing many of these compounds. Yet, environmental influences on the sponge-associated microbiota and bioactive compo...
2023-05-12 | MTBLS1388 | MetaboLights
UnknownSimple Synthetic Routes to Carbene-M-Amido (M=Cu, Ag, Au) Complexes for Luminescence and Photocatalysis Applications.
Not available
S-EPMC8456869 | biostudies-literature
TranscriptomicsTranscription profiling of Arabidopsis slr1 mutant and wild type lateral root segments treated with auxin
Lateral root initiation was used as a model system to study the mechanisms behind auxin-induced cell division. Genome-wide transcriptional changes were monitored during the early steps of lateral root initiation. Inclusion of the dominant auxin signaling mutant solitary root1 (slr1) identified genes...
ORGANISM(S): Arabidopsis thaliana 
2007-07-13 | E-GEOD-3350 | biostudies-arrayexpress
UnknownBite-angle bending as a key for understanding group-10 metal reactivity of d10-[M(NHC)2] complexes with sterically modest NHC ligands.
Not available
S-EPMC5811130 | biostudies-literature
TranscriptomicsA family of secreted pathogenesis-related proteins in Candida albicans
Analyzing culture supernatants of yeast and hyphal cells of Candida albicans by mass spectrometry, we found two close homologues of pathogenesis-related (PR-) 1 proteins, Rbe1p and Rbt4p, in the secretome of this human pathogen. By sequence homology, we assigned three yet not characterized open read...
ORGANISM(S): Candida albicans 
2013-03-25 | E-GEOD-28212 | biostudies-arrayexpress
TranscriptomicsNext Generation Sequencing identifies O2-responsive genes in the human pathogenic fungus Aspergillus fumigatus
Low oxygen conditions are not only common to natural environments but also occur during tissue invasive growth in the human host. Only few cellular factors have been identified up to now that allow the fungus to efficiently adapt its energy metabolism to the lack of O2. In the present study, we cult...
ORGANISM(S): Aspergillus fumigatus 
2014-07-25 | E-GEOD-55943 | biostudies-arrayexpress
TranscriptomicsProbing the RyhB-2 regulon in Salmonella Typhimurium
Typically, the expression of sRNAs is activated in response to environmental stimuli in order to regulate gene expression through post-transcriptional mechanisms. In the present work we show that the Salmonella Typhimurium paralog sRNAs RyhB-1 and RyhB-2 are induced in response to the nitrosating ag...
ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 
2014-06-10 | E-GEOD-58110 | biostudies-arrayexpress
MetabolomicsUntargeted Metabolomics for Integrative Taxonomy: Metabolomics, DNA Marker-Based Sequencing, and Phenotype Bioimaging

Integrative taxonomy is a fundamental part of biodiversity and combines traditional morphology with additional methods such as DNA sequencing or biochemistry. Here, we aim to establish untargeted metabolomics for use in chemotaxonomy. We used three thallose liverwort species Riccia glauca

2026-01-30 | MTBLS4668 | MetaboLights
TranscriptomicsIdentification of Salmonella genes regulated by STM2239
Transcriptional profile of Salmonella enterica sv Typhimurium SL1344 M-NM-^TSTM2239 mutant cultures containing either a plasmid control (pFLAG-CTC) or a plasmid carrying STM2239 (pFLAG-STM2239) in the presence of IPTG. Total RNA was harvested from three biological replicates of M-NM-^TSTM2239 mutant...
ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 
2013-05-23 | E-GEOD-47165 | biostudies-arrayexpress
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