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ProteomicsMolecular Basis of Oligopeptide Recognition and Transport in the Pneumococcal Ami permease system
dataset to create a peptide candidate list of E. coli peptides bound to either AliB or AmiA from Streptococcus pneumoniae.
ORGANISM(S): Escherichia Coli Bl21 (ncbitaxon:511693) 
2023-08-23 | MSV000092727 | MassIVE
ProteomicsAnalysis of the altered t-cell proteome in proteasome impaired patients
Proteome analysis of samples derived from patients with impaired protasome functionality.
ORGANISM(S): Homo sapiens (Human) 
2025-12-15 | PXD062316 | Pride
Proteasome Human 
ProteomicsStaphylococcal SplA and SplB serine proteases target ubiquitin(-like) specific proteases
Staphylococcus aureus is a gram-positive opportunistic pathogen that has colonized nearly 30% of the human population and can cause life-threatening infections. The antibiotic treatment of S. aureus infection is often hindered by several resistances expressed by the pathogen, and therefore alternati...
ORGANISM(S): Staphylococcus Arlettae (ncbitaxon:29378) 
2024-10-14 | MSV000096077 | MassIVE
TranscriptomicsTargeted transcriptome analysis of the SigB regulon in Bacillus subtilis
Bacillus subtilis is exposed to a wide range of transitory stress and starvation conditions. Here we investigate the expression changes observed in the B. subtilis wild type strain 168 and its isogenic sigB mutant(BSM29) with respect to each stress condition tested. Gene expression was queried for t...
ORGANISM(S): Bacillus subtilis 
2012-03-14 | E-GEOD-32895 | biostudies-arrayexpress
TranscriptomicsTranscriptome analysis of Bacillus subtilis salt stress adaptation
Whole-genome microarray technology and state-of-the-art proteomic techniques were applied to provide a global and time-resolved picture of the physiological response of B. subtilis cells exposed to a severe and sudden osmotic up-shift. This combined experimental approach provided quantitative data f...
ORGANISM(S): Bacillus subtilis 
2010-05-19 | E-GEOD-18345 | biostudies-arrayexpress
ProteomicsThe extracellular serine protease from Staphylococcus epidermidis elicits a type 2-biased immune response in atopic dermatitis patients
Background: Atopic dermatitis (AD) is a chronic, relapsing inflammatory skin disease with skin barrier defects and a misdirected type 2 immune response against harmless antigens. The skin microbiome in AD is characterized by a reduction in microbial diversity with a dominance of staphylococci, inclu...
ORGANISM(S): Staphylococcus Epidermidis (ncbitaxon:1282) Homo Sapiens (ncbitaxon:9606) 
2024-05-28 | MSV000094880 | MassIVE
ModelsLiebal2012 - B.subtilis transcription inhibition model
Liebal2012 - B.subtilis transcription inhibition model An important transcription factor of B.subsilis is sigma B . Liebal et al. (2012) have performed experiments in B.subtilis wild type and mutant straits to test and validate a mathematical model of the dynamic...
2024-09-02 | BIOMD0000000461 | BioModels
ModelsLiebal2012 - B.subtilis post-transcriptional instability model
Liebal2012 - B.subtilis post-transcription instability model An important transcription factor of B.subsilis is sigma B . Liebal et al. (2012) have performed experiments in B.subtilis wild type and mutant straits to test and validate a mathematical model of the d...
2024-09-02 | BIOMD0000000459 | BioModels
ModelsLiebal2012 - B.subtilis sigB proteolysis model
Liebal2012 - B.subtilis sigB proteolysis model An important transcription factor of B.subsilis is sigma B . Liebal et al. (2012) have performed experiments in B.subtilis wild type and mutant straits to test and validate a mathematical model of the dynamics of sig...
2024-09-02 | BIOMD0000000460 | BioModels
ProteomicsAlterations in Bacillus subtilis caused by high salinity and the compatible solute glycine betaine
Cells were grown aerobically at 37 degC in Spizizen minimal medium either supplemented with 1 mM glycine betaine, 1.2 M NaCl or 1.2 M NaCl and 1 mM glycine betaine. Cells were harvested in the exponential growth phase at an OD600nm of 1.0. Proteome analysis was performed with samples from three biol...
ORGANISM(S): Bacillus Subtilis (ncbitaxon:1423) 
2020-01-08 | MSV000084766 | MassIVE
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