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ProteomicsA COFRADIC protocol to study protein ubiquitination
We here apply the COmbined FRActional DIagonal Chromatography (COFRADIC) technology to enrich for ubiquitinated peptides and identify sites of ubiquitination by mass spectrometry. Our technology bypasses the need to ectopically overexpress tagged variants of ubiquitin and the use of sequence-biased ...
ORGANISM(S): Homo sapiens (Human) 
2016-07-08 | PXD000934 | Pride
Jurkat Cofradic Ubiquitin 
ProteomicsAn up to date workflow for plant (phospho)proteomics
Protein phosphorylation is one of the most common post-translational modifications (PTMs), which can regulate protein activity and localization, as well as protein–protein interactions in numerous cellular processes. Phosphopeptide enrichment techniques enabled plant researchers to acquire insight i...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) Zea mays (Maize) 
2016-09-26 | PXD003634 | Pride
Arabidopsis Maize Phosphoproteomics 
ProteomicsThe small signalling peptide CEP5 attenuates the dynamic AUX/IAA equilibrium
Root architecture is vital for plant growth and largely depends on primary root growth and lateral root development. Several plant hormones have been shown to affect root architecture among which auxin has been granted a central role. Lately, small signalling peptides also emerged as potential molec...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2022-03-01 | PXD002589 | Pride
Arabidopsis Cep5 peptide Proteomics 
ProteomicsA COFRADIC protocol to study protein ubiquitination
We here apply the COmbined FRActional DIagonal Chromatography (COFRADIC) technology to enrich for ubiquitinated peptides and identify sites of ubiquitination by mass spectrometry. Our technology bypasses the need to ectopically overexpress tagged variants of ubiquitin and the use of sequence-biased ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2017-03-29 | MSV000080780 | MassIVE
ProteomicsTaestivum - Shoot, iBAQ (Vuetal,frontplantsci2017)
abundance based on iBAQ, Interaction consistency score: 22.9, Coverage: 14
ORGANISM(S): 4565 
2017-00-00 | 118632943 | PAXDB
ProteomicsTaestivum - Shoot, iBAQ (Vuetal,frontplantsci2017)
abundance based on iBAQ, Interaction consistency score: 24.5, Coverage: 14
ORGANISM(S): 4565 
2017-00-00 | 402959892 | PAXDB
ProteomicsTaestivum - Shoot, iBAQ (Vuetal,frontplantsci2017)
abundance based on iBAQ, Interaction consistency score: 25.2, Coverage: 14
ORGANISM(S): 4565 
2017-00-00 | 1222202851 | PAXDB
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