Stewart L L - OmicsDI

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Unknown (3262)
Transcriptomics (181)
Proteomics (57)
Genomics (51)
Metabolomics (25)
Models (3)
Genomic (1)
Multiomics (1)

Organisms

Homo sapiens (112)
Mus musculus (59)
Mycobacterium tuberculosis (6)
Mycobacterium tuberculosis H37Rv (5)
Rattus norvegicus (5)
Chlorocebus sabaeus (4)
Solanum tuberosum (4)
Ovis aries (4)
Pseudomonas aeruginosa (4)
Gallus gallus (4)
Ursus americanus (3)
Saccharomyces cerevisiae (3)
Lolium perenne (2)
Schizosaccharomyces pombe (2)
Arabidopsis thaliana (2)
Canis lupus familiaris (1)
Aplysina aerophoba (1)
Ictalurus punctatus x Ictalurus furcatus (1)
Fusarium verticillioides (1)
Saccharomyces mikatae IFO 1815 (1)
Rhagoletis pomonella (1)
Mus sp. (1)
Oncorhynchus nerka (1)
Gossypium barbadense (1)
Rhipicephalus microplus (1)
Ambystoma mexicanum (1)
Panicum virgatum (1)
Daphnia pulex (1)
Trypanosoma brucei brucei (1)
Equus caballus (1)

Organisms

Severe acute respiratory syndrome coronavirus 2 (1)
Homo sapiens (1)

Repository

biostudies-arrayexpress (201)
pride (26)
MetaboLights (25)
EGA (23)
PeptideAtlas (12)
MassIVE (10)
ENA (8)
PanoramaPublic (5)
jPOST (4)
BioModels (2)
dbGaP (1)
FAIRDOMHub (1)

Tissue

Others (12)
Cell culture (4)
Blood (2)
Epithelial cell (2)
Lung (2)
Tooth enamel (2)
Blood cell (1)
Breast cancer cell line (1)
Cell suspension culture (1)
Dental plaque (1)
HeLa cell (1)
Monocyte (1)
Permanent cell line cell (1)
Skin (1)
T cell (1)
Testis (1)
Whole body (1)

Disease

Normal (3)
Breast cancer (3)
T. circumcincta infection (1)
Sham infected (1)
Non-infected (1)
Partially decidualised (1)
Psoroptes ovis infestation (1)
Dental caries (1)
Lung squamous cell carcinoma (1)
Non-small cell lung carcinoma (1)

Technology Type

Mass Spectrometry (26)
Mass spectrometry (19)
Shotgun proteomics (19)
NMR spectroscopy (4)
Bottom-up proteomics (3)
Affinity purification coupled with mass spectrometry proteomics (2)
ILLUMINA, Illumina Genome Analyzer IIx, Illumina HiSeq 2500 (1)
AB 5500 Genetic Analyzer, Ion Torrent PGM (1)
Illumina HiSeq 1000, Ion Torrent PGM, Illumina Genome Analyzer IIx (1)
Illumina Genome Analyzer IIx, Illumina HiSeq 2500, Illumina HiSeq 2000 (1)
Illumina HiSeq 2500, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
NMR spectroscopy assay (1)
Mass spectrometry assay (1)
Affinity proteomics (1)
Data-dependent acquisition (1)
Data-independent acquisition (1)
Gel-based experiment (1)
SWATH MS (1)

Instrument Platform

Q Exactive (6)
Illumina HiSeq 4000 (5)
NextSeq 500 (5)
Liquid Chromatography MS - negative - reverse phase (4)
Illumina HiSeq 3000 (3)
Nuclear Magnetic Resonance (NMR) - (3)
Liquid Chromatography MS - positive - reverse phase (3)
NextSeq 2000 (2)
Illumina HiSeq 2500 (2)
Illumina NovaSeq 6000 (2)
Orbitrap Astral (2)
Orbitrap Fusion Lumos (2)
Direct infusion MS - negative (2)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (2)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (2)
Desktop Ubuntu 22 (1)
Covaris, NEBNext Ultra II DNA library prep kit (1)
Illumina Genome Analyzer IIx (1)
NA (1)
10X Chromium (1)
Illumina HiSeq 1000 (1)
Ion Torrent S5 XL (1)
NextSeq 550 (1)
Illumina HiSeq 2000 (1)
6230A Time-of-Flight LC/MS (1)
6545 Q-TOF LC/MS (1)
LTQ Orbitrap (1)
Orbitrap Ascend (1)
Orbitrap Eclipse (1)
Q Exactive Plus (1)

Publication Date

2011 (37)
2012 (28)
2010 (25)
2014 (24)
2024 (18)
2016 (17)
2022 (16)
2015 (15)
2013 (14)
2023 (11)
2021 (11)
2018 (11)
2009 (10)
2007 (9)
2008 (8)
2020 (7)
2019 (6)
2017 (5)
2026 (4)
2005 (2)
2025 (2)
2006 (1)

UNIPROT ID/AC

A0A024RC46 (12)
A0A0A0MR66 (12)
A5A3E0 (12)
A6NL93 (12)
A9IYQ1 (12)
B4DRV9 (12)
B4DY08 (12)
B4E3A4 (12)
B5MBZ0 (12)
B7ZME8 (12)
B8ZZQ6 (12)
C9JZR2 (12)
E7EVA0 (12)
E9PRE2 (12)
G5E972 (12)
G8JLB6 (12)
H0YAB3 (12)
H0YJH7 (12)
H7BY16 (12)
H7BZL0 (12)
I3L4N8 (12)
J9JID7 (12)
O00193 (12)
O00264 (12)
O00267 (12)
O00273 (12)
O00567 (12)
O00767 (12)
O14497 (12)
O14578 (12)

ENSEMBL ID

ENSG00000247315 (10)
ENSG00000170477 (4)
ENSG00000204131 (2)
ENSG00000147251 (1)

CHEBI ID

CHEBI:18186 (15)
CHEBI:28044 (14)
CHEBI:30769 (13)
CHEBI:24898 (11)
CHEBI:25017 (11)
CHEBI:15428 (11)
CHEBI:16199 (11)
CHEBI:27897 (11)
CHEBI:18237 (10)
CHEBI:17268 (10)
CHEBI:27266 (10)
CHEBI:7916 (10)
CHEBI:18012 (10)
CHEBI:25094 (9)
CHEBI:16811 (9)
CHEBI:17234 (9)
CHEBI:28300 (9)
CHEBI:15741 (9)
CHEBI:17568 (9)
CHEBI:16010 (9)
CHEBI:16449 (9)
CHEBI:32816 (9)
CHEBI:15354 (9)
CHEBI:17596 (9)
CHEBI:17368 (9)
CHEBI:17992 (8)
CHEBI:17822 (8)
CHEBI:16856 (8)
CHEBI:17126 (8)
CHEBI:22660 (8)

Metabolite Name

Tyrosine (9)
Phenylalanine (8)
Tryptophan (8)
Succinate (7)
Glycine (6)
Uracil (6)
Choline (6)
Inosine (6)
Hypoxanthine (6)
Ascorbate (5)
Leucine (5)
Phenylalanine (5)
Valine (5)
Lysine (5)
Isoleucine (5)
Glutamine (5)
Fumarate (5)
Citrate (5)
Adenine (5)
L-Phenylalanine (5)
Methanol (4)
Shikimate (4)
Glutamate (4)
Aspartate (4)
ATP (4)
AMP (4)
Tyrosine (4)
Urea (4)
Glucose (4)
Ornithine (4)

First Public Date

2026 (3)
2021 (2)
2025 (1)
2023 (1)
2020 (1)

Modelling Approach

Ordinary differential equation model (2)

Lab affiliation

Functional Proteomics, ICR (2)
Moffitt Cancer Center (2)
University of Vienna, Faculty of Chemistry, Department of Analytical Chemistry (2)
Aikaterini Kontrogianni-Konstantopoulos, Ph.D. Professor of Biochemistry and Molecular Biology Director, Interdisciplinary Training Program in Muscle Biology Marlene and Stewart Greenebaum Comprehensive Cancer Center University of Maryland School of Medicine 108 N. Greene Street, 215A Baltimore, MD 21201 (1)
Department of Biochemistry and Molecular Biology, University of Calgary, Alberta, Canada; Department of Physiology and Pharmacology, University of Calgary, Alberta, Canada; The Hotchkiss Brain Institute, University of Calgary, Alberta, Canada; McCaig Institute for Bone and Joint Health, University of Calgary, Alberta, Canada. (1)
Department of Biochemistry, University of Washington, Seattle, Washington 98195, USA (1)
Department of Cultural Heritage - University of Bologna (1)
Department of Pathology and Immunology Washington University School of Medicine (1)
EPFL, SV, GHI, UPCOL, Switzerland (1)
Epigenetics Program, Department of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania (1)
Equipe ProbiHôte Unité MICALIS Centre INRAE Domaine de Vilvert 78350 Jouy en Josas Tél: 01 34 65 24 69 (1)
Head of the Crick Mass Spectrometry Proteomics Platform (1)
Human Immunological Diseases Section, Laboratory of Clinical Immunology and Microbiology, Division of Intramural Research, NIAID, NIH, Department of Health and Human Services, Unites States Government (1)
Institute of Animal Science, University of Hohenheim, Stuttgart, Germany (1)
MRC Cancer Unit, University of Cambridge; Hutchison/MRCResearch Centre, Box 197, Cambridge Biomedical Campus, Cambridge, CB2 0XZ, UK (1)
Medical Research Council - Laboratory of molecular biology (1)
Pratik Jagtap, Managing Director, Center for Mass Spectrometry and Proteomics, 43 Gortner Laboratory, 1479 Gortner Avenue, St. Paul, MN 55108 Phone: 612-624-9275 (1)
School of BioSciences, The University of Melbourne, Victoria, Australia (1)
School of Life Sciences, University of Nottingham (1)
Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, UK (1)
Univ of Washington Dept of Genome Sciences (1)
University of Maryland School of Medicine Department of Anatomy and Neurobiology Marlene and Stewart Greenebaum Cancer Center (1)
University of Washington Department of Genome Sciences (1)

IsPrivate

False (2)

Classification

viruses (1)

Study type

Transcription profiling by array (110)
RNA-seq of coding RNA (29)
ChIP-seq (16)
Comparative genomic hybridization by array (8)
ChIP-chip by tiling array (7)
RNA-seq of coding RNA from single cells (6)
DNA-seq (4)
Genotyping by array (3)
Ribo-seq (3)
Transcription profiling by SAGE (2)
Unknown experiment type (2)
Cell line - High-throughput sequencing (2)
ChIP-chip by array (2)
Methylation profiling by array (2)
Trajectory (1)
Transcription profiling by tiling array (1)
Transcription profiling by RT-PCR (1)
RNA-seq of total RNA (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (367)
2023 (333)
2021 (322)
2025 (307)
2024 (282)
2020 (250)
2019 (205)
2018 (188)
2015 (168)
2017 (159)
2016 (152)
2014 (147)
2012 (113)
2011 (105)
2013 (103)
2010 (83)
2009 (55)
2008 (39)
2026 (38)
2007 (18)
2006 (6)
2004 (6)
2005 (5)
2003 (3)
2002 (3)
2001 (2)
1999 (2)
1998 (2)

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Dialysis and Acid-Base Balance: A Comparative Physiological Analysis of Boston and Stewart Models.

Not available

S-EPMC12653126 | biostudies-literature

Kinematics of Stewart Platform Explains Three-Dimensional Movement of Honeybee's Abdominal Structure.

Not available

S-EPMC6518379 | biostudies-literature

Strong phylogeographic structure in a sedentary seabird, the Stewart Island Shag (Leucocarbo chalconotus).

Not available

S-EPMC3948693 | biostudies-literature

An essential role for the antiviral endoribonuclease, RNase-L, in antibacterial immunity.

Not available

S-EPMC2634919 | biostudies-literature

Characterization of HphA: The First Enzyme in the Homologation Pathway of l-Phenylalanine and l-Tyrosine.

Not available

S-EPMC11382533 | biostudies-literature

Conservation of Three-Dimensional Structure of Lepidoptera and Trichoptera L-Fibroins for 290 Million Years.

Not available

S-EPMC9504780 | biostudies-literature

Transcription profiling by array of the potato (Solanum tuberosum L.) plant response to moderately elevated temperature

Although significant work has been undertaken regarding the response of model and crop plants to heat shock during the acclimatory phase, few studies have examined the steady state response to the mild heat stress encountered in temperate agriculture. In the present work we therefore exposed tuberis...

ORGANISM(S): Solanum tuberosum

2013-08-01 | E-MTAB-1655 | biostudies-arrayexpress

Assessing the impact of nitrogen supplementation in oats across multiple growth locations and years with targeted phenotyping and high-resolution metabolite profiling approaches

Oats (Avena sativa L.) are a healthy food, being high in dietary fibre (e.g. β-glucans), antioxidants, minerals, and vitamins. Understanding the effect of variety and crop management on nutritional quality is important. The response of four oat varieties to increased nitrogen levels was investigated...

2021-04-26 | MTBLS1801 | MetaboLights

Generation of ³⁴S-substituted protein-bound [4Fe-4S] clusters using ³⁴S-L-cysteine.

Not available

S-EPMC7200944 | biostudies-literature

Phosphodiesterase-1 Inhibitory Activity of Two Flavonoids Isolated from Pistacia integerrima J. L. Stewart Galls.

Not available

S-EPMC4402172 | biostudies-literature

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3580 Results

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