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TranscriptomicsThe insulator protein SU(HW) modulates nuclear lamina interactions of the Drosophila genome: DamID
Specific interactions of the genome with the nuclear lamina (NL) are thought to assist chromosome folding inside the nucleus and to contribute to the regulation of gene expression. High-resolution mapping has recently identified hundreds of large, sharply defined lamina-associated domains (LADs) in ...
ORGANISM(S): Drosophila melanogaster 
2011-01-24 | E-GEOD-20311 | biostudies-arrayexpress
GenomicsGenome-wide analyses of Su(Hw) binding in Drosophila ovary
The twelve zinc finger Suppressor of Hairy-wing [Su(Hw)] protein binds thousands of sites in Drosophila genome and is essential for the function of the gypsy insulator. Loss of the globally expressed Su(Hw) protein causes female sterility due to tissue-specific defect limited to female germline. Usi...
ORGANISM(S): Drosophila melanogaster 
2011-10-19 | E-GEOD-33052 | biostudies-arrayexpress
TranscriptomicsThe insulator protein SU(HW) modulates nuclear lamina interactions of the Drosophila genome: expression
Specific interactions of the genome with the nuclear lamina (NL) are thought to assist chromosome folding inside the nucleus and to contribute to the regulation of gene expression. High-resolution mapping has recently identified hundreds of large, sharply defined lamina-associated domains (LADs) in ...
ORGANISM(S): Drosophila melanogaster 
2011-01-24 | E-GEOD-20312 | biostudies-arrayexpress
TranscriptomicsSu(Hw) and Shep RIP-seq in Kc and BG3 cell lines
Su(Hw) and Shep RIP-seq in Kc and BG3 cell lines RIP-seq with multiple antibodies to two proteins in two Drosophila cell lines, at least 2 replicates for each IP and input
ORGANISM(S): Drosophila melanogaster 
2014-07-29 | E-GEOD-55894 | biostudies-arrayexpress
TranscriptomicsSU(HW)-HB.BG3.SU(HW)_RNAi
modENCODE_submission_3718 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: The goal of these experiments are to validate and confirm the locations of 125 chromosomal proteins across the Drosophila mel...
ORGANISM(S): Drosophila melanogaster 
2011-10-12 | E-GEOD-32812 | biostudies-arrayexpress
TranscriptomicsSU(HW)-HB.S2.LacZ_RNAi
modENCODE_submission_3719 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: The goal of these experiments are to validate and confirm the locations of 125 chromosomal proteins across the Drosophila mel...
ORGANISM(S): Drosophila melanogaster 
2011-10-12 | E-GEOD-32813 | biostudies-arrayexpress
GenomicsRole of Su(Hw) in DNA amplification in Drosophila ovaries
Role of Su(Hw) in DNA amplification in Drosophila ovaries
PRJNA714523 | ENA
TranscriptomicsSU(HW)-HB.BG3.LacZ_RNAi
modENCODE_submission_3716 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: The goal of these experiments are to validate and confirm the locations of 125 chromosomal proteins across the Drosophila mel...
ORGANISM(S): Drosophila melanogaster 
2011-10-12 | E-GEOD-32810 | biostudies-arrayexpress
TranscriptomicsSU(HW)-HB.BG3.CP190_RNAi
modENCODE_submission_3714 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: The goal of these experiments are to validate and confirm the locations of 125 chromosomal proteins across the Drosophila mel...
ORGANISM(S): Drosophila melanogaster 
2011-10-12 | E-GEOD-32808 | biostudies-arrayexpress
TranscriptomicsSU(HW)-HB.BG3.CTCF_RNAi
modENCODE_submission_3715 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: The goal of these experiments are to validate and confirm the locations of 125 chromosomal proteins across the Drosophila mel...
ORGANISM(S): Drosophila melanogaster 
2011-10-12 | E-GEOD-32809 | biostudies-arrayexpress
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