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GenomicsSu(H)_Kc_cells_ChIP-seq
modENCODE_submission_5018 This submission comes from a modENCODE project of Kevin White. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: The White Lab is aiming to map the association of all the Transcription Factors (TF) on the genome of Drosophila melanogaster...
ORGANISM(S): Drosophila melanogaster 
2013-12-21 | E-GEOD-53561 | biostudies-arrayexpress
TranscriptomicsGene expression changes in Su(H) induced wing disc hyperplasia
The outcome of Notch activation of proliferation depends on cellular context. In Drosophila wing discs Notch pathway overactivation results in hyperplasia. To understand the mechanisms we have used genomic strategies to indetify the Notch-S(H) target genes directly regulated in wing disc hyperplasia...
ORGANISM(S): Drosophila melanogaster 
2013-12-31 | E-GEOD-41427 | biostudies-arrayexpress
GenomicsSu(H) early embryonic ChIP-seq
This submission data was generated in Angela Stathopoulos's lab. Project goal was to map Su(H) associated regions on Drosophila melanogaster genome. In Drosophila embryos, a nuclear gradient of Dorsal (Dl) directs differential gene expression along the dorsoventral (DV) axis, translating it into d...
ORGANISM(S): Drosophila melanogaster 
2014-10-13 | E-GEOD-59726 | biostudies-arrayexpress
GenomicsSu(H)_0-8_embryonic_ChIP-seq
modENCODE_submission_5017 This submission comes from a modENCODE project of Kevin White. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: The White Lab is aiming to map the association of all the Transcription Factors (TF) on the genome of Drosophila melanogaster...
ORGANISM(S): Drosophila melanogaster 
2013-08-11 | E-GEOD-49776 | biostudies-arrayexpress
GenomicsSu(H)_8-16h_embryo_ChIP-seq
modENCODE_submission_4068 This submission comes from a modENCODE project of Kevin White. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: The White Lab is aiming to map the association of all the Transcription Factors (TF) on the genome of Drosophila melanogaster...
ORGANISM(S): Drosophila melanogaster 
2013-08-28 | E-GEOD-50337 | biostudies-arrayexpress
GenomicsSu(Hw)_WPP-seq
modENCODE_submission_4105 This submission comes from a modENCODE project of Kevin White. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: The White Lab is aiming to map the association of many of the non-histone chromosomal proteins on the genome of Drosophila me...
ORGANISM(S): Drosophila melanogaster 
2013-08-28 | E-GEOD-50356 | biostudies-arrayexpress
GenomicsSu(Hw)_16-24-seq
modENCODE_submission_4104 This submission comes from a modENCODE project of Kevin White. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: The White Lab is aiming to map the association of many of the non-histone chromosomal proteins on the genome of Drosophila me...
ORGANISM(S): Drosophila melanogaster 
2013-08-28 | E-GEOD-50355 | biostudies-arrayexpress
TranscriptomicsPAR-CLIP analysis of YTHDC1, SRSF1, SRSF3, SRSF7, SRSF9 and SRSF10 in human HeLa cells
Label the cells overexpressed Flag tagged YTHDC1, SRSF1, SRSF3, SRSF7, SRSF9 and SRSF10 with 4-SU, the RNA bound by YTHDC1 and SRSF proteins can be got by Flag IP followed by RNA isolation by using the TRIzol (Invitrogen) reagent by following the company manual.the RNA was then used for library prep...
ORGANISM(S): Homo sapiens 
2016-02-17 | E-GEOD-71096 | biostudies-arrayexpress
UnknownmiR-21 is upregulated, promoting fibrosis and blocking G2/M in irradiated rat cardiac fibroblasts.
Not available
S-EPMC7733651 | biostudies-literature
TranscriptomicsPAR-CLIP for JARID2 before and after differentiation of mouse embryonic stem cells
This experiment was designed to indentify RNAs making direct contact JARID2 as mouse ESCs differentiate E14 WT were left untreated or differentiated with 2 M-BM-5M RA for 24 hrs. In both cases, ceslls were pulsed with 4-SU, irradiated with UV, and subjected to JARID2 immunoprecipitation.
ORGANISM(S): Mus musculus 
2014-08-20 | E-GEOD-60516 | biostudies-arrayexpress
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