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TranscriptomicsSpatio-temporal gene expression of various tissues/organs throughout entire growth in rice
An overview of the expression pattern of all rice genes under natural field conditions based on microarray analysis of different organs and tissues at various stages of growth and development from transplanting to harvesting. A total of 48 samples representing organs/tissues at various stages of gro...
ORGANISM(S): Oryza sativa Japonica Group 
2011-01-13 | E-GEOD-21396 | biostudies-arrayexpress
TranscriptomicsEmbryo and endosperm gene expression profile at ripening stage
Gene expression profiling of embryo and endosperm at 7-42 days after flowering (DAF) was performed to obtain an overall signature of the rice transcriptome during grain development and maturation. After the onset of pollination, embryo and endosperm samples at 7, 10, 14, 21, 28 and 42 DAF with three...
ORGANISM(S): Oryza sativa Japonica Group 
2012-12-03 | E-GEOD-39432 | biostudies-arrayexpress
TranscriptomicsLeaf gene expression profile of rice during sunrise
A continuous gene expression profiling of leaves was performed at regular interval during the sunrise period to understand the changes of transcriptional program in the rice plant grown under natural field conditions in response to solar radiation. At 79 days after transplanting, leaf samples corres...
ORGANISM(S): Oryza sativa Japonica Group 
2012-12-03 | E-GEOD-36043 | biostudies-arrayexpress
TranscriptomicsContinuous gene expression profile of leaf at nighttime throughout the entire growth of rice in the field
A continuous gene expression profiling of leaves was performed during nighttime at regular interval from transplanting until harvesting to understand the changes of transcriptional program and physiological state throughout entire growth of the rice plant under natural field conditions. The uppermos...
ORGANISM(S): Oryza sativa Japonica Group 
2012-12-03 | E-GEOD-36042 | biostudies-arrayexpress
TranscriptomicsLeaf gene expression profile of rice during sunset
A continuous gene expression profiling of leaves was performed at regular interval during the sunset period to understand the changes of transcriptional program in the rice plant grown under natural field conditions in response to solar radiation. At 78 days after transplanting, leaf samples corresp...
ORGANISM(S): Oryza sativa Japonica Group 
2012-12-03 | E-GEOD-36044 | biostudies-arrayexpress
TranscriptomicsDiurnal and circadian gene expression profile of leaf throughout the entire growth of rice in the field
A continuous gene expression profiling of leaves was performed at regular interval during a 48-hr period in 9 different growth stages from transplanting until harvesting to characterize the diurnal and circadian gene expression profile of rice and to understand the transcriptional program and physio...
ORGANISM(S): Oryza sativa Japonica Group 
2012-12-03 | E-GEOD-36040 | biostudies-arrayexpress
TranscriptomicsGene expression profile of inflorescence at early developmental stage
Gene expression profiling of infrorescence was performed to obtain overall signature of transcriptome at early developmental stages of inflorescence. After the reproductive stage transition, inflorescence samples corresponding to the early stages of development were collected based on the size. We o...
ORGANISM(S): Oryza sativa Japonica Group 
2012-12-03 | E-GEOD-39426 | biostudies-arrayexpress
TranscriptomicsGrain gene expression profile at early developmental stage
Gene expression profiling of ovary at 1-10 days and embryo at 4-10 days after flowering (DAT) was performed to obtain an overall signature of the rice transcriptome during early grain development. After the onset of pollination, ovary samples at 1-10 DAT and embryo samples at 4-10 DAT with two repli...
ORGANISM(S): Oryza sativa Japonica Group 
2012-12-03 | E-GEOD-39427 | biostudies-arrayexpress
TranscriptomicsRice global gene expression profile in response to plant hormones
A time course gene expression profiling of rice treated with various plant hormones (abscisic acid, gibberelin, auxin, brassinosteroid, cytokinin and jasmonic acid) was performed to obtain an overall signature of the rice transcriptome in response to each phytohormone. The transcriptome of rice see...
ORGANISM(S): Oryza sativa Japonica Group 
2012-12-03 | E-GEOD-39429 | biostudies-arrayexpress
TranscriptomicsContinuous gene expression profile of root at daytime throughout the entire growth of rice in the field
A continuous gene expression profiling of roots was performed during daytime at regular interval from transplanting until harvesting to characterize the transcriptional and physiological changes in the root system of rice throughout the entire growth under natural field conditions. Roots were sample...
ORGANISM(S): Oryza sativa Japonica Group 
2012-12-03 | E-GEOD-39424 | biostudies-arrayexpress
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