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TranscriptomicsSmall RNA Solexa sequencing of 4 Plant Species in the Cucurbitaceae family
Total RNA was isolated from different tissues (leaf, stem and flesh, rind and placenta of the fruits) using TRIzol reagent and small RNA libraries were generated from four cucurbit species: bottle gourd (Lagenaria siceraria (accession Grif 1617 collection from India)), Cucurbita moschata (accession ...
ORGANISM(S): Lagenaria siceraria 
2012-08-02 | E-GEOD-38176 | biostudies-arrayexpress
TranscriptomicsSmall RNA Solexa sequencing of chickpea (Cicer arietinum)
The total RNA were extracted from pooled tissues of leaves and flowers from several plants of chickpea (Cicer arietinum) using TRIzol reagent (Invitrogen) according to the manufacturer's instructions. Then small RNAs ranging in 18–30 nucleotides were size fractionated electrophoretically, isolated f...
ORGANISM(S): Cicer arietinum 
2015-05-08 | E-GEOD-62216 | biostudies-arrayexpress
TranscriptomicsSmall RNAs from 4-week old seedling of Oryza sativa
In order to identify new miRNAs, NAT-siRNAs and possibly abiotic-stress regulated small RNAs in rice, three small RNA libraries were constructed from control rice seedlings and seedlings exposed to drought or salt stress, and then subjected to pyrosequencing. Totally three sets of small RNAs, which ...
ORGANISM(S): Oryza sativa 
2008-12-08 | E-GEOD-12317 | biostudies-arrayexpress
TranscriptomicsTranscriptome-wide identification of small RNA targets in rice
MicroRNA (miRNA)-guided target RNA expression is vital for a wide variety of biological processes in eukaryotes. The integration of miRNAs in diverse biological networks relies upon the confirmation of their RNA targets. Most miRNA targets in Arabidopsis are validated, but those in rice are yet to b...
ORGANISM(S): Oryza sativa Japonica Group 
2010-05-03 | E-GEOD-17398 | biostudies-arrayexpress
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