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UnknownMechanistic insights into plant SUVH family H3K9 methyltransferases and their binding to context-biased non-CG DNA methylation.
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S-EPMC6140468 | biostudies-literature
GenomicsMechanistic insights into plant SUVH family H3K9 methyltransferases and their binding to context-biased non-CG DNA methylation
DNA methylation functions in gene silencing and the maintenance of genome integrity. In plants, non-CG DNA methylation is linked through a self-reinforcing loop with histone 3 lysine 9 dimethylation (H3K9me2). The plant-specific SUPPRESSOR OF VARIEGATION 3–9 HOMOLOG (SUVH) family H3K9 methyltransfer...
ORGANISM(S): Arabidopsis thaliana 
2018-08-17 | GSE114009 | GEO
GenomicsMechanistic insights into plant SUVH family H3K9 methyltransferases and their binding to context-biased non-CG DNA methylation
Mechanistic insights into plant SUVH family H3K9 methyltransferases and their binding to context-biased non-CG DNA methylation
PRJNA454877 | ENA
GenomicsIdentifying crossover locations in an Arabidopsis thaliana meiMIGS-SUVH Col x Ler F2 population using genotyping by sequencing
Identifying crossover locations in an Arabidopsis thaliana meiMIGS-SUVH Col x Ler F2 population using genotyping by sequencing
PRJEB76271 | ENA
GenomicsIdentifying crossover locations in an Arabidopsis thaliana meiMIGS-H2A.W meiMIGS-SUVH Col x Ler F2 population using genotyping by sequencing
Identifying crossover locations in an Arabidopsis thaliana meiMIGS-H2A.W meiMIGS-SUVH Col x Ler F2 population using genotyping by sequencing
PRJEB76686 | ENA
TranscriptomicsIdentifying crossover locations in an Arabidopsis thaliana meiMIGS-SUVH Col x Ler F2 population using genotyping by sequencing
Genomic DNA from 190 meiMIGS-SUVH Col x Ler F2 individuals was extracted using CTAB and used to generate sequencing libraries as described (Rowan et al; Yelina et al), with the following modifications. DNA was extracted from 3 rosette leaves of 5 week old plants and 150 ng of DNA used as input for e...
ORGANISM(S): Arabidopsis thaliana 
2025-04-23 | E-MTAB-14139 | biostudies-arrayexpress
TranscriptomicsIdentifying crossover locations in an Arabidopsis thaliana meiMIGS-H2A.W meiMIGS-SUVH Col x Ler F2 population using genotyping by sequencing
Genomic DNA from 191 meiMIGS-H2A.W meiMIGS-SUVH Col x Ler F2 individuals was extracted using CTAB and used to generate sequencing libraries as described (Rowan et al; Yelina et al), with the following modifications. DNA was extracted from 3 rosette leaves of 5 week old plants and 150 ng of DNA used ...
ORGANISM(S): Arabidopsis thaliana 
2025-04-23 | E-MTAB-14153 | biostudies-arrayexpress
TranscriptomicsA methylated-DNA-binding complex required for plant development mediates transcriptional activation of promoter methylated genes [RNA-seq]
We found SUVH-SDJ complex occupies promoter methylated genes and promotes the expression of these genes.
ORGANISM(S): Arabidopsis thaliana 
2018-12-30 | GSE124485 | GEO
Methylation profilingA methylated-DNA-binding complex required for plant development mediates transcriptional activation of promoter methylated genes [Bisulfite-seq]
We found SUVH-SDJ complex occupies promoter methylated genes and promotes the expression of these genes.
ORGANISM(S): Arabidopsis thaliana 
2018-12-27 | GSE124376 | GEO
GenomicsA methylated-DNA-binding complex required for plant development mediates transcriptional activation of promoter methylated genes [ChIP-seq]
We found SUVH-SDJ complex occupies promoter methylated genes and promotes the expression of these genes.
ORGANISM(S): Arabidopsis thaliana 
2018-12-27 | GSE124377 | GEO
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