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MetabolomicsEicosanoid-immunometabotypes reveal genotypic links to cervicovaginal pH in progestagen synchronized South African Dohne Merino ewes
Eicosanoid-immunometabotypes reveal genotypic links to cervicovaginal pH in progestagen synchronized South African Dohne Merino ewes.
2026-07-16 | MTBLS14823 | MetaboLights
UnknownIncreasing Collisional Activation of Protein Complexes Using Smaller Aperture Source Sampling Cones on a Synapt Q-IM-TOF Instrument with a Stepwave Source.
Not available
S-EPMC7855748 | biostudies-literature
OtherZanthoxylum mzML data acquired using Waters Acquity UPLC linked to Synapt G2 qTOF HDMS
Zanthoxylum species metabolic profiling using waters Acquity UPLC-Synapt G2 qTOF
ORGANISM(S): Zanthoxylum (ncbitaxon:67937) 
2021-09-02 | MSV000088044 | MassIVE
MetabolomicsGNPS Zanthoxylum mzML data acquired using Waters Acquity UPLC linked to Synapt G2 qTOF HDMS
Zanthoxylum species metabolic profiling using waters Acquity UPLC-Synapt G2 qTOF
ORGANISM(S): Zanthoxylum (ncbitaxon:67937) 
MSV000088044 | GNPS
ProteomicsA comprehensive LFQ benchmark dataset to validate data analysis pipelines on modern day acquisition strategies in proteomics
A comprehensive LFQ benchmark dataset to validate data analysis pipelines on modern day acquisition strategies in proteomics using SCIEX TripleTOF5600 and 6600+, Orbitrap QE-HFX, Waters Synapt GS-Si and Synapt XS and Bruker timsTOF Pro.
ORGANISM(S): Candida albicans (Yeast) Homo sapiens (Human) Escherichia coli 
2022-02-14 | PXD028735 | Pride
Swath Dia Benchmark 
ProteomicsDIA-SIFT: A precursor and product ion filter for accurate stable isotope data-independent acquisition proteomics
Human 293T cells grown in SILAC media, mixed at known ratios (1/5, 1/3, 1/2, 1, 2, 3, 5). Data acquired using the UDMSE method on a Synapt G2-S. Accompanies the DIA-SIFT project (github.com/martin-lab/DIA-SIFT).
ORGANISM(S): Homo sapiens (Human) 
2018-07-16 | PXD009949 | Pride
Human Mse 293t Silac Synapt 
ProteomicsDiscovery of potential early colorectal cancer biomarker
Differential analysis of proteomes originated from early lesion of colorectal cancer and colon control tissue using FFPE-FASPTM and Label free analysis using 2DnanoUPLC separation before analysis on a qTOF synapt HDMS G2 using ion mobility as supplementary separation dimension
ORGANISM(S): Homo sapiens (Human) 
2017-03-28 | PXD005735 | Pride
Pt2nm Early stage Ffpe-fasp Human colorectal cancer Pt1nm Label free 
ProteomicsPytheas E. coli 16S rRNA sample analysis
Mass spectrometry remains an important method for analysis of modified nucleosides ubiquitously present in cellular RNAs, in particular for ribosomal and transfer RNAs that play crucial roles in mRNA translation and decoding. Furthermore, modifications have effect on the lifetimes of nucleic acids i...
ORGANISM(S): Escherichia coli 
2022-05-04 | PXD030538 | Pride
16s Rna Ribosome Isotope labeling Pytheas 
MetabolomicsMetabolomic profiling of primary mouse proximal tubule cells (mPTCs) derived from 24-week-old CTR and Atg7 PT-KO kidneys
To explore the role of ATG7 in the kidney PT, we crossed mice homozygous for floxed alleles of Atg7 with Ggt1-Cre mice expressing Cre recombinase under the rat Ggt1 (gamma-glutamyltransferase 1) gene promoter. This generated Atg7fl/fl; γGt1cre/cre mice (hereafter referred to as Atg7 PT-KO), in which...
2026-09-30 | MTBLS15857 | MetaboLights
ProteomicsFaustovirus global proteome - Faustovirus, an asfarvirus-related new lineage of giant viruses infecting amoebae
Global proteome study of two protein extracts of purified Faustovirus, using a bi dimensionnal nanoLC fractionnation combined to a Synapt G2 Si HDMSe monitoring enabling ion mobility
ORGANISM(S): Faustovirus 
2015-04-22 | PXD001858 | Pride
Nano2dlc-ms/ms Faustovirus Ion mobility 
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