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MetabolomicsIntegrated Proteomic and Metabolomic Analyses Show Differential Effects of Glucose Availability in Marine Synechococcus and Prochlorococcus

We compared changes induced by the addition of 100 nM and 5 mM glucose on the proteome and metabolome complements in Synechococcus sp. strains WH8102, WH7803, and BL107 and Prochlorococcus sp. strains MED4, SS120, and MIT9313, grown either under standard light conditions or in d...

2023-02-06 | MTBLS5462 | MetaboLights
MetabolomicsRelease of Ecologically Relevant Metabolites by the Cyanobacterium, Synechococcus elongatus CCMP 1631
Phytoplankton are known to release organic compounds that fuel secondary production by heterotrophic bacteria. Here we show that an abundant marine cyanobacterium, Synechococcus elongatus, contributes a variety of nitrogen-rich and sulfur-containing compounds to dissolved organic matter. A combinati...
2015-01-26 | MTBLS155 | MetaboLights
TranscriptomicsCircadian and diurnal expression data of Synechococcus
In the unicellular cyanobacterium, Synechococcus elongatus PCC 7942, essentially all promoter activities are under the control of the circadian clock in continuous light (LL) conditions. Here, we employed high-density oligonucleotide arrays to explore comprehensive profiles of genome-wide Synechococ...
ORGANISM(S): Synechococcus elongatus PCC 7942 
2009-07-31 | E-GEOD-14225 | biostudies-arrayexpress
TranscriptomicsCircadian transcriptional profile of Synechococcus without KaiC phosphorylation cycling
In the unicellular cyanobacterium, Synechococcus elongatus PCC 7942, essentially all promoter activities are under the control of the circadian clock in continuous light (LL) conditions. Here, we employed high-density oligonucleotide arrays to investigate comprehensive profiles of genome-wide Synech...
ORGANISM(S): Synechococcus elongatus PCC 7942 
2013-11-28 | E-GEOD-48901 | biostudies-arrayexpress
TranscriptomicsRNA-seq of Synechococcus sp. WH8102 zur knockout mutant
Identification of Zur-regulated genes in Synechococcus sp. WH8102
ORGANISM(S): Synechococcus sp. WH 8102 
2022-05-31 | E-MTAB-10194 | biostudies-arrayexpress
ProteomicsMeta-genomic and –proteomic insights into photoautotrophic and heterotrophic interactions in a Synechococcus culture
Microbial photoautotroph-heterotroph interactions underlie marine food webs and shape ecosystem diversity and structure in upper ocean environments. However, the high complexity of in situ ecosystems renders it difficult to study these interactions. Two-member co-culture systems of picocyanobacteria...
ORGANISM(S): Synechococcus sp. YX04-3 
2020-05-27 | PXD015067 | Pride
Synechococcus culture  exoproteome  metaproteome 
TranscriptomicsGene expression response to copper toxicity between coastal and open ocean strains of marine Synechococcus
Marine cyanobacteria are thought to be the most sensitive of the phytoplankton groups to copper toxicity, yet little is known of the transcriptional response of marine Synechococcus to copper shock. Global transcriptional response to two levels of copper shock was assayed in both a coastal and an o...
ORGANISM(S): Synechococcus sp. CC9311 
2010-05-17 | E-GEOD-13910 | biostudies-arrayexpress
ProteomicsMarine Synechococcus sp. strain WH7803 shows specific adaptative responses to assimilate nanomolar concentrations of nitrate
Marine Synechococcus, together with Prochlorococcus, contribute to a significant proportion of the primary production on Earth. The spatial distribution of these two groups of marine picocyanobacteria depends on different factors such as nutrients availability or temperature. Some Synechococcus eco...
ORGANISM(S): Synechococcus sp. WH 7803 Bacteria 
2022-07-11 | PXD031142 | Pride
Synechococcus wh7803  nitrogen metabolism  orbitrap fusion 
ProteomicsIntegrated proteomics analysis of the utilization of glucose by Synechococcus BL107
We compared changes, induced by the addition of 100 nM and 5 mM glucose in the proteome ofseveral strains of Synechococcus and Prochlorococcus, growing either under standard light conditions or darkness. Our results demonstrate that glucose is being metabolized by thesecyanobacteria, using mainly th...
ORGANISM(S): Synechococcus sp. BL107 
2023-01-05 | PXD035395 | Pride
Prochlorococcus Glucose metabolism Picocyanobacteria Synechococcus 
TranscriptomicsNocturnal expression data of Synechococcus in WT and kaiABC-null strains
In the unicellular cyanobacterium, Synechococcus elongatus PCC 7942, most of genes are downregulated in the dark, while 10% of genes are upregulated. Here, we employed high-density oligonucleotide arrays to explore comprehensive profiles of genome-wide Synechococcus gene expression in wild type and ...
ORGANISM(S): Synechococcus elongatus PCC 7942 
2011-09-29 | E-GEOD-22468 | biostudies-arrayexpress
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