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TranscriptomicsCircadian and diurnal expression data of Synechococcus
In the unicellular cyanobacterium, Synechococcus elongatus PCC 7942, essentially all promoter activities are under the control of the circadian clock in continuous light (LL) conditions. Here, we employed high-density oligonucleotide arrays to explore comprehensive profiles of genome-wide Synechococ...
ORGANISM(S): Synechococcus elongatus PCC 7942 
2009-07-31 | E-GEOD-14225 | biostudies-arrayexpress
TranscriptomicsCircadian transcriptional profile of Synechococcus without KaiC phosphorylation cycling
In the unicellular cyanobacterium, Synechococcus elongatus PCC 7942, essentially all promoter activities are under the control of the circadian clock in continuous light (LL) conditions. Here, we employed high-density oligonucleotide arrays to investigate comprehensive profiles of genome-wide Synech...
ORGANISM(S): Synechococcus elongatus PCC 7942 
2013-11-28 | E-GEOD-48901 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Synechococcus elongatus wild type, K10 and MuD mutants growth with or without Fe
Synechococcus elongatus PCC7942 wild type, the IdiB-free S.elongatus mutant K10 (Michel et al. 1999; Microbiology, 145: page 1473-1484) and the IdiC-merodiploid mutant MuD (Pietsch et al. 2007, Photosynth. Res. 94: page 91-108) were cultivated in BG11 medium, continuously bubbled with 2%CO2-enriched...
ORGANISM(S): Synechococcus elongatus 
2008-07-13 | E-MEXP-1657 | biostudies-arrayexpress
TranscriptomicsConsequences of a deletion in dspA on transcript accumulation in Synechocystis sp. strain PCC6803.
Abstract: A sensor histidine kinase of Synechococcus sp. strain PCC7942, designated nblS, was previously identified and shown to be critical for the acclimation of cells to high-light and nutrient limitation conditions and to influence the expression of a number of light-responsive genes. The nblS o...
ORGANISM(S): Synechocystis sp. PCC 6803 
2006-01-18 | E-GEOD-4019 | biostudies-arrayexpress
TranscriptomicsCircadian transcriptional profile of Synechococcus under the kaiA overexpression
In the unicellular cyanobacterium, Synechococcus elongatus PCC 7942, essentially all promoter activities are under the control of the circadian clock in continuous light (LL) conditions. Here, we employed high-density oligonucleotide arrays to investigate comprehensive profiles of genome-wide Synech...
ORGANISM(S): Synechococcus elongatus PCC 7942 
2013-12-31 | E-GEOD-47015 | biostudies-arrayexpress
TranscriptomicsNocturnal expression data of Synechococcus in WT and kaiABC-null strains
In the unicellular cyanobacterium, Synechococcus elongatus PCC 7942, most of genes are downregulated in the dark, while 10% of genes are upregulated. Here, we employed high-density oligonucleotide arrays to explore comprehensive profiles of genome-wide Synechococcus gene expression in wild type and ...
ORGANISM(S): Synechococcus elongatus PCC 7942 
2011-09-29 | E-GEOD-22468 | biostudies-arrayexpress
TranscriptomicsA high resolution map of a cyanobacterial transcriptome
Previous molecular and mechanistic studies have identified several principles of prokaryotic transcription, but less is known about the global transcriptional architecture of bacterial genomes. Here we perform a comprehensive study of a cyanobacterial transcriptome, that of Synechococcus elongatus P...
ORGANISM(S): Synechococcus elongatus PCC 7942 
2011-05-16 | E-GEOD-29264 | biostudies-arrayexpress
GenomicsSynechococcus elongatus PCC 7942 = FACHB-805
Transcriptome analysis of mycoporine-2-glycine (M2G)-expressing Synechococcus elongatus PCC7942 under salt stress
PRJDB38059 | ENA
TranscriptomicsEffect of clpX overexpression in Synechococcus
In the unicellular cyanobacteriuIn the cyanobacterium, Synechococcus elongatus PCC 7942, most genes show rhythmic expression controlled by the Kai-based clock under continuous light conditions (LL). Overexpression of clpX led to a decrease in kaiBC promoter activity, disruption of circadian rhythm, ...
ORGANISM(S): Synechococcus elongatus PCC 7942 
2013-07-31 | E-GEOD-42542 | biostudies-arrayexpress
TranscriptomicsCircadian expression data of Synechococcus in WT, rpoD6-null, sasA-null and rpaA-null strains
In the unicellular cyanobacterium, Synechococcus elongatus PCC 7942, most genes show rhythmic expression controlled by the Kai-based clock under continuous light conditions (LL). We found that rpoD6-null mutants impaired expression of clock-controlled genes peaking at hours 8-10 in LL, while sasA-nu...
ORGANISM(S): Synechococcus elongatus PCC 7942 
2012-03-01 | E-GEOD-28430 | biostudies-arrayexpress
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