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MetabolomicsInorganic Carbon Limitation in Cells of the Wild Type and Photorespiratory Mutants of the Cyanobacterium Synechocystis sp. Strain PCC 6803
The amount of inorganic carbon represents one of the main environmental factors determining productivity of photoautotrophic organisms. Using the model cyanobacterium Synechocystis sp. PCC 6803, we performed a first metabolome study with cyanobacterial cells shifted from high CO2 (5% in air) into co...
2015-09-14 | MTBLS5 | MetaboLights
TranscriptomicsGene expression patterns of sulfur starvation in Synechocystis sp. PCC 6803
The unicellular cyanobacterium Synechocystis sp. PCC 6803 is a model system for studying biochemistry, genetics and molecular biology of photobiological processes. Despite its importance in basic and applied research, the genome-wide picture of transcriptional regulation in this bacterium is limited...
ORGANISM(S): Synechocystis sp. PCC 6803 
2008-07-24 | E-GEOD-11970 | biostudies-arrayexpress
TranscriptomicsTranscriptomic response to long time ethanol production in the cyanobacterium Synechocystis sp. PCC6803
The production of biofuels in photosynthetic microalgae and cyanobacteria is considered a promising alternative to the generation of fuels from fossil resources. However, to be economically competitive, producer strains need to be established that synthesize the targeted product at high yield and ...
ORGANISM(S): Synechocystis sp. PCC 6803 
2013-08-06 | E-GEOD-49552 | biostudies-arrayexpress
ProteomicsPG-regulated Synechocystis sp. PCC6803
Cells from the Synechocystis sp. PCC6803 strain were used to identify phosphatidylglycerol-regulated proteins by label-free quantitative shotgun proteomics combining SDS-PAGE prefractionation and data-dependent LC–MS/MS. Acquired data was searched against a composite protein sequence database of cya...
ORGANISM(S): Synechocystis sp. Synechocystis sp. PCC 6803 
2014-03-06 | PXD000363 | Pride
Quantitative label-free proteomics Cyanobacteria Phosphatidylglycerol Gelc-ms/ms Synechocystis sp. pcc6803 
ModelsMontagud2010 - Genome-scale metabolic network of Synechocystis sp. PCC6803 (iSyn669)
Montagud2010 - Genome-scale metabolic network of Synechocystis sp. PCC6803 (iSyn669) This model is described in the article: Reconstruction and analysis of genome-scale metabolic model of a photosynthetic bacterium. Montagud A, Navarro E, Fernández de Córdoba P, Urchueguía J...
2015-07-30 | MODEL1507180008 | BioModels
TranscriptomicsConsequences of a deletion in dspA on transcript accumulation in Synechocystis sp. strain PCC6803.
Abstract: A sensor histidine kinase of Synechococcus sp. strain PCC7942, designated nblS, was previously identified and shown to be critical for the acclimation of cells to high-light and nutrient limitation conditions and to influence the expression of a number of light-responsive genes. The nblS o...
ORGANISM(S): Synechocystis sp. PCC 6803 
2006-01-18 | E-GEOD-4019 | biostudies-arrayexpress
TranscriptomicsDifferential expression of whole transcriptome in Synechocystis sp. PCC 6803
The model cyanobacterium Synechocystis sp. PCC 6803 was used for a systematic survey of differential expression with a focus on antisense (as)RNAs and non-coding (nc)RNAs. A microarray was constucted with on average 5 probes for each transcript known thus far, including ncRNAs and asRNAs. The result...
ORGANISM(S): Synechocystis sp. PCC 6803 
2010-05-18 | E-GEOD-16162 | biostudies-arrayexpress
GenomicsSynechocystis sp. PCC6803
Synechocystis sp. PCC6803 resequencing
PRJNA1450533 | ENA
ProteomicsSynechocystis sp. PCC 6803 trophic condition
Targeted proteome analysis of Synechocystis sp. PCC 6803 under photoautotrophic and mixotrophic conditions
ORGANISM(S): Synechocystis Sp. Pcc 6803 
2020-06-02 | PXD010010 | JPOST Repository
TranscriptomicsThe small RNA PsrR1 affects oligomerization of photosystem I by post-transcriptional repression of psaL in Synechocystis sp. PCC6803
Comparison of gene expression of WT Synechocystis cells with cells overexpressing the sRNA PsrR1 in order to detect direct targets of the sRNA PsrR1. We monitored gene expression of an Synechocystis PCC6083 overexpressor strain (psrR1+) (Mitschke et al., 2011) harboring a self-replicating plasmid fr...
ORGANISM(S): Synechocystis sp. PCC 6803 
2012-10-10 | E-GEOD-41411 | biostudies-arrayexpress
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