Sort   by:  
 Page size 
TranscriptomicsCooperative function of the three different kinds of nucleoid-associated proteins encoded on the IncP-7 plasmid pCAR1 [KT2440 chromosome chip]
Nucleoid-associated proteins (NAPs) are known to fold bacterial DNA and influence global transcription. Incompatibility P-7 plasmid pCAR1 carries three genes encoding NAPs: H-NS family protein Pmr, NdpA-like protein Pnd, and HU-like protein Phu. Because previous reports about plasmid-encoded NAPs ma...
ORGANISM(S): Pseudomonas putida 
2013-12-07 | E-GEOD-53067 | biostudies-arrayexpress
TranscriptomicsCooperative function of the three different kinds of nucleoid-associated proteins encoded on the IncP-7 plasmid pCAR1 [pCAR1 plasmid chip]
Nucleoid-associated proteins (NAPs) are known to fold bacterial DNA and influence global transcription. Incompatibility P-7 plasmid pCAR1 carries three genes encoding NAPs: H-NS family protein Pmr, NdpA-like protein Pnd, and HU-like protein Phu. Because previous reports about plasmid-encoded NAPs ma...
ORGANISM(S): Pseudomonas putida 
2013-12-07 | E-GEOD-53068 | biostudies-arrayexpress
TranscriptomicsMvaT family proteins encoded on IncP-7 plasmid pCAR1 and the host chromosome regulate host transcriptome cooperatively but differently (KT2440)
MvaT proteins are recognized as a member of H-NS family proteins in pseudomonads. IncP-7 conjugative plasmid pCAR1, which was originally found in Pseudomonas resinovorans, carries an mvaT homologous gene, pmr. In Pseudomonas putida KT2440 bearing pCAR1, it was previously reported that pmr and chromo...
ORGANISM(S): Pseudomonas putida 
2015-09-03 | E-GEOD-72637 | biostudies-arrayexpress
TranscriptomicsMvaT family proteins encoded on IncP-7 plasmid pCAR1 and the host chromosome regulate host transcriptome cooperatively but differently (pCAR1)
MvaT proteins are recognized as a member of H-NS family proteins in pseudomonads. IncP-7 conjugative plasmid pCAR1, which was originally found in Pseudomonas resinovorans, carries an mvaT homologous gene, pmr. In Pseudomonas putida KT2440 bearing pCAR1, it was previously reported that pmr and chromo...
ORGANISM(S): Pseudomonas putida 
2015-09-03 | E-GEOD-72638 | biostudies-arrayexpress
TranscriptomicsEffects of carbazole-degradative plasmid pCAR1 on biofilm morphology in three Pseudomonas strains.
To elucidate the impact of the carriage of carbazole-degradative plasmid pCAR1 on biofilm formation by host bacteria, we compared biofilm morphology of pCAR1-free and pCAR1-carrying three Pseudomonas hosts: P. putida KT2440, P. aeruginosa PAO1 and P. fluorescens Pf0-1 using confocal laser scanning m...
ORGANISM(S): Pseudomonas putida 
2014-05-08 | E-GEOD-56856 | biostudies-arrayexpress
TranscriptomicsAlterations of RNA maps of IncP-7 plasmid pCAR1 in various Pseudomonas bacteria.
RNA mapping on pCAR1 carried by KT2440, CA10, PAO1, Pf0-1, HS01, and JCM 2778 6 strains/biological entities were compared
ORGANISM(S): Pseudomonas aeruginosa 
2011-10-10 | E-GEOD-28568 | biostudies-arrayexpress
TranscriptomicsModulation of primary cell function of host Pseudomonas bacteria by conjugative plasmid pCAR1
Impacts of plasmid carriage on its host cell were comprehensively analyzed using conjugative plasmid pCAR1 in the three different kinds of hosts, Pseudomonas putida KT2440, P. aeruginosa PAO1, and P. fluorescens Pf0-1. Various analyses of the host phenotype showed that pCAR1 carriage reduced host fi...
ORGANISM(S): Pseudomonas putida 
2012-12-25 | E-GEOD-39636 | biostudies-arrayexpress
TranscriptomicsInhibition of Pseudomonas aeruginosa swarming motility by 1-naphthol and other bicyclic compounds bearing hydroxyl group.
Many bacteria convert bicyclic compounds, such as indole and naphthalene, to oxidized compounds, including hydroxyindoles and naphthols. Pseudomonas aeruginosa, a ubiquitous bacterium that inhabits diverse environments, shows pathogenicity against animals, plants and other microorganisms, and increa...
ORGANISM(S): Pseudomonas aeruginosa PAO1 
2015-02-20 | E-GEOD-60343 | biostudies-arrayexpress
ProteomicsProteomic analysis of Cdkal1-KO mouse podocyte cell line
E11 murine kidney podocyte cell line was purchased from Cell Lines Service. Cells were cultured in RPMI medium (Wako) supplemented with 10% fetal bovine serum (Sigma) at 33°C and induced to differentiate by culture at 37°C for two weeks and 5% CO2. Cdkal1 knockout in the E11 cell line was performed...
ORGANISM(S): Mus Musculus (mouse) 
2025-11-11 | PXD057714 | JPOST Repository
UnknownGenetic insights into ossification of the posterior longitudinal ligament of the spine.
Not available
S-EPMC10353864 | biostudies-literature
Sort   by:  
 Page size