Tandem-affinity purification (tap)

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pride (92)
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Mass Spectrometry (92)
Affinity purification coupled with mass spectrometry proteomics (72)
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protozoa (3)
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Modification

15.994915 (3)
57.021464 (3)
6.020129 (1)
71.037114 (1)
79.966331 (1)

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Other (4)
ChIP-chip by array (3)
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Lab affiliation

Department of Experimental Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA (4)
Department of Experimental Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA (3)
Experimental Radiation Oncology, MD Anderson Cancer Center, Houston, TX, USA (3)
Medical bioanalytics Institute for ophthalmic research Eberhard-Karls-University Tuebingen (3)
Babraham Institute (2)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, The Netherlands (2)
University of Pennsylvania (2)
(1) Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium; (2) VIB Center for Plant Systems Biology, B-9052 Ghent, Belgium. (1)
(1) German Center for Neurodegenerative Diseases (DZNE), 72076 Tübingen, Germany (2) University of Tübingen, Center for Ophthalmology, Institute for Ophthalmic Research, 72074 Tübingen, Germany (1)
1) German Center for Neurodegenerative Diseases (DZNE), 72076 Tübingen, Germany (2) University of Tübingen, Center for Ophthalmology, Institute for Ophthalmic Research, 72074 Tübingen, Germany (1)
Cancer Epidemiology Program, Division of Population Sciences, H. Lee Moffitt Cancer Center (1)
Center for Translational Research, Children’s National Research Institute, Children’s National Hospital, Washington,DC, United States & Children’s Hospital of Philadelphia, Philadelphia, PA, United States (1)
Cornell University (1)
Departament de Bioquímica i Biologia Molecular, Universitat de València. C/ Dr. Moliner 50. 46100 Burjassot, València. Spain (1)
Department of Biology, University of Konstanz, Universitaetsstrasse 10, 78457 Konstanz (1)
Department of Biomedical Science Centre for Membrane Interactions and Dynamics (CMIAD) Firth Court, Western Bank The University of Sheffield Sheffield S10 2TN United Kingdom (1)
Department of Biosciences, University of Durham, South Road, Durham, DH1 3LE, UK (1)
Department of Developmental Biology, University of Pittsburgh, USA (1)
Department of Genetics and Genome Sciences University of Connecticut Health Center 400 Farmington Avenue Farmington, CT 06030-6403 USA Phone (860) 679-8878 Fax (860) 679-8345 E-mail gunzl@uchc.edu (1)
Department of Internal Medicine, Morsani College of Medicine, University of South Florida (1)
Department of Internal Medicine, Morsani College of Medicine, University of South Florida, Tampa, Florida, USA (1)
Department of Molecular and Cellular Pharmacology, University of Miami Miller School of Medicine, Miami, Florida, 33136, USA (1)
Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium Center for Plant Systems Biology, VIB, 9052 Ghent, Belgium (1)
Department of Plant Biotechnology and Bioinformatics, Oxidative Stress Signaling Lab, Ghent University (1)
Department of Radiation Oncology Univeristy of Texas Health Science Center at San Antonio (1)
Department of Radiation Oncology, Univerisity of Texas Health Science Center at San Antonio (1)
Department of Radiation Oncology, University of Texas Health Sciences Center at San Antonio (1)
Division of Gastroenterology and Hepatology; Shanghai Institute of Digestive Disease; NHC Key Laboratory of Digestive Diseases; State Key Laboratory for Oncogenes and Related Genes; Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai 200001, China (1)
Division of Molecular Biology, Department of Biology, Faculty of Science, University of Zagreb, Croatia (1)
Donald Danforth Plant Science Center (1)

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Characterizations of HSP90-interacting complex in renal cells using tandem affinity purification and its potential role in kidney stone formation

Heat shock protein 90 (HSP90) is a highly abundant molecular chaperone that interacts with many other intracellular proteins to regulate various cellular processes. However, compositions of the HSP90-interacting complex remain underinvestigated. This study thus aimed to characterize such complex in ...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2018-12-17 | MSV000083252 | MassIVE

Identification of Mitogen-Activated Protein Kinase Phosphatase-1 (MKP-1) protein partners using Tandem Affinity Purification and Mass Spectrometry

According to the World Health Organization Report, depressive disorders affect about 10% of the population. The molecular mechanism of the pathogenesis of depression is still not well understood. The new findings point to phosphatases as potential targets for effective depression therapy. The aim of...

ORGANISM(S): Rattus Norvegicus (ncbitaxon:10116)

2023-01-19 | MSV000091093 | MassIVE

A toolbox for epitope-tagging and genome-wide location analysis in Candida albicans

Background : Candida albicans is a diploid pathogenic fungus not yet amenable to routine genetic investigations. Understanding aspects of the regulation of its biological functions and the assembly of its protein complexes would lead to further insight into the biology of this common disease-causing...

ORGANISM(S): Candida albicans

2010-05-16 | E-GEOD-13427 | biostudies-arrayexpress

Microarray analysis of TAP::ALG-1 associated RNAs isolated from synchronized 'wild-type' animals and 'mir-58' mutants

To discover new miRNA targets, we generated a C. elegans transgenic line expressing a functional N-terminally Tandem Affinity Purification (TAP) tagged ALG-1 protein (C. elegans strain WS4303). We crossed the TAP::ALG-1 transgene into the mir-58(n4640) mutant background to generate the strain WS5041...

ORGANISM(S): Caenorhabditis elegans

2012-03-01 | E-GEOD-32942 | biostudies-arrayexpress

Purification of TAP::ALG-1 complexes and associated RNA from mixed-stage TAP::ALG-1 transgenic (WS4303) and wild-type (N2) animals

To discover new miRNA targets, we generated a C. elegans transgenic line expressing a functional N-terminally Tandem Affinity Purification (TAP) tagged ALG-1 protein We purified TAP::ALG-1 complexes from mixed-stage TAP::ALG-1 transgenic (WS4303) and wild-type (N2, serving as a mock control) animals...

ORGANISM(S): Caenorhabditis elegans

2012-03-01 | E-GEOD-32941 | biostudies-arrayexpress

RIP-Seq analysis of Trypanosoma brucei ELAV-like protein Tb927.8.6650

A tagged ectopic version of the ELAV-like protein Tb927.8.6650 of T. brucei was expressed in stable cell lines and pulled down. Co-purifying transcripts were analyzed by sequencing to identify RNAs associated with Tb927.8.6650. Stable procyclic form cell lines expressing tetracycline-inducible TAP-t...

ORGANISM(S): Trypanosoma brucei

2013-04-18 | E-GEOD-46160 | biostudies-arrayexpress

A novel inducible retroviral expression system for StrepHA-tandem affinity purification mass-spectrometry-based proteomics

Tandem-affinity purification mass spectrometry using the streptavidin-hemagglutinin (SH)-tag has been successfully employed to map signaling networks in several large-scale studies. However its application has so far been restricted to the small number of Flp/FRT-recombination competent cell lines....

ORGANISM(S): Homo sapiens (Human) Mus musculus (Mouse)

2016-01-05 | PXD002855 | Pride

Characterizations of HSP90-interacting complex in renal cells using tandem affinity purification and its potential role in kidney stone formation

ORGANISM(S): Homo sapiens (Human)

2018-12-17 | PXD011432 | Pride

Chaperone heat shock protein 90 hek293t kidney stone sirna tap tag

Integrated Tandem Affinity Protein Purification Using the Polyhistidine plus Extra 4 Amino Acids (HiP4) Tag System

Interactome analysis of HBx using a novel tag system (HiP4-tag system).

ORGANISM(S): Homo Sapiens (human)

2023-02-28 | PXD036256 | JPOST Repository

Integrated Tandem Affinity Protein Purification Using the Polyhistidine plus Extra 4 Amino Acids (HiP4) Tag System２

Interactome analysis of TARDBP (TDP-43) using a novel tag system (HiP4-tag system).

ORGANISM(S): Homo Sapiens (human)

2023-02-28 | PXD038445 | JPOST Repository

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