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UnknownScopararanes C-G: new oxygenated pimarane diterpenes from the marine sediment-derived fungus Eutypella scoparia FS26.
Not available
S-EPMC3347013 | biostudies-literature
ProteomicsThe senescence-associated cell surfaceome reveals potential senotherapeutic targets in human and mouse cells
Excessive accumulation of senescent cells contributes to a wide range of physiological declines and age-related pathologies. Senotherapy targeting senescent cell surface molecules represents an attractive approach to eliminate senescent cells with high specificity and accessibility. However, the com...
ORGANISM(S): Homo Sapiens (human) Mus Musculus (mouse) 
2025-01-26 | PXD048921 | JPOST Repository
UnknownFunction-Wise Dual-Omics analysis for radiation pneumonitis prediction in lung cancer patients.
Not available
S-EPMC9528994 | biostudies-literature
GenomicsDiurnal changes of HDAC3, Rev-erbα, NCoR and Pol II recruitment to the mouse liver genome and of H3K9Ac
We reported a diurnal changes in the recruitment of HDAC3, Rev-erbα, NCoR and Pol II to the mouse liver genome as well as H3K9 acetylation in vivo at ZT10 and ZT22. ChIP-Seq profiling of HDAC3, Rev-erbα, NCoR and Pol II binding and H3K9Ac in mouse liver harvested at 2 different times (ZT10 and ZT22)...
ORGANISM(S): Mus musculus 
2011-03-11 | E-GEOD-26345 | biostudies-arrayexpress
TranscriptomicsGene expression in mouse liver depleted of HDAC3
Liver-specific depletion of HDAC3 leads to liver steatosis (fatty liver), suggesting disregulation of lipid metabolism. This is correlated with changes in lipid metabolic gene expression. Livers depleted of HDAC3 were removed from 12 week old male HDAC3 fl/fl mice (loxP sites flanking exon 4 to 7 of...
ORGANISM(S): Mus musculus 
2011-03-11 | E-GEOD-25937 | biostudies-arrayexpress
OtherQuantitative proteomics reveals the essential roles of STIM1 in the testicular cord formation in mouse testis.
Data from ProteomeXchange, PXD ID: PXD002563. Experiment: group1, file: folder summary. Published as part of Mol Cell Proteomics. 2015 Jul 21 . From the Abstract: {{i}} Testicular cord formation in male gonadogenesis involves assembly of several cell types, the precise molecular mechanism is still ...
ORGANISM(S): Mus_musculus_viruses, Mouse 
GPM32320017393 | GPMDB
Resource Reanalysis 
TranscriptomicsGenetics of the hippocampal transcriptome in mouse: a systematic survey and online neurogenomics resource
The Hippocampus Consortium data set provides estimates of mRNA expression in the adult hippocampus of 99 genetically diverse strains of mice including 67 BXD recombinant inbred strains, 13 CXB recombinant inbred strains, a diverse set of common inbred strains, and two reciprocal F1 hybrids. The hipp...
ORGANISM(S): Mus musculus 
2016-07-26 | E-GEOD-84767 | biostudies-arrayexpress
ProteomicsTemporal Proteomic and Lipidomic Profiles of Cerulein-Induced Acute Pancreatitis Reveals Novel Insights for Metabolic Alterations in the Disease Pathogenesis
The pathophysiological mechanisms of acute pancreatitis (AP) are complex and have remained a mystery to date, but metabolism is gradually recognized as an important driver of AP onset and development. We used a cerulein-induced AP mouse model to conduct LC-MS/MS based time-course proteomics and lipi...
ORGANISM(S): Mus Musculus 
2022-12-06 | PXD038567 |
ProteomicsTarget identification of dioxygenated amide derivatives interacting proteins
To identify the direct binding proteins of dioxygenated amide by chemical proteomics, we firstly evaluated the efficiency of optimized probe 6D-PP probe labelling the E. coli bacterial proteomes by in-gel fluorescence. Briefly, the E. coli bacterial lysates were incubated with 100 M probe 6D-PP und...
ORGANISM(S): Homo Sapiens 
2023-12-08 | PXD047691 |
UnknownReactivation of the G1 enhancer landscape underlies core circuitry addiction to SWI/SNF.
Not available
S-EPMC10783513 | biostudies-literature
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