Taproot - OmicsDI

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Unknown (144)
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Arabidopsis thaliana (26)
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Organisms

Raphanus sativus (7)
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Xylaria sp. MSU_SB201401 (1)
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root metagenome (1)
Arabidopsis thaliana (1)

Repository

biostudies-arrayexpress (57)
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geo (10)
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pride (2)
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Tissue

Tc_control_#9 (1)
Cortical parenchyma of root (1)
Differentiation zone of primary root (1)
Taproot zone 4 (1)
Anthers (1)
Coleoptile (1)
Taproot zone 2 (1)
Stele (1)
Immature cob (1)
Tip of leaf (1)
Primary root (1)
Silks (1)
Topmost leaf (1)
Node 5 of crown root (1)
Nodes 1 to 3 of crown root (1)
Shoot tip (1)
Internode (1)
Stem and shoot apical meristem (1)
Thirteenth leaf (1)
Shoot apical meristem (1)
Node 4 of crown root (1)
Taproot zone 3 (1)
Pre-pollination cob (1)
Eighth leaf (1)
Fourth elongated internode (1)
Meristematic zone and elongation zone (1)
Eleventh leaf (1)
Seminal root (1)
Meiotic tassel (1)
Taproot zone 1 (1)

Technology Type

Mass Spectrometry (2)
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Top-down proteomics (1)
Bottom-up proteomics (1)

Instrument Platform

Illumina HiSeq 2500 (8)
NextSeq 550 (3)
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Q Exactive (2)
BGI (1)
Illumina Genome Analyzer IIx (1)
DNBSEQ-G400 (1)
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Impact II (1)
Liquid Chromatography MS - alternating - reverse-phase (1)

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CHEBI ID

CHEBI:187038 (1)
CHEBI:12937 (1)
CHEBI:37208 (1)
CHEBI:61302 (1)
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CHEBI:20386 (1)
CHEBI:25520 (1)
CHEBI:24168 (1)
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CHEBI:79162 (1)
CHEBI:32817 (1)
CHEBI:61572 (1)
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CHEBI:36592 (1)
CHEBI:73212 (1)
CHEBI:17242 (1)
CHEBI:73770 (1)
CHEBI:133512 (1)
CHEBI:35766 (1)

Metabolite Name

Pentoic acid* (1)
2-hydroxylignocerate* (1)
Inositol hexakisphosphate (1)
1-kestose (1)
Glucoheptose (1)
Matrine (1)
Oxymatrine (1)
Lysylleucine (1)
Glutaminylleucine (1)
Adipate (1)
Vanillin (1)
Stigmasterol (1)
Pinitol (1)
2'-AMP (1)
Tyramine O-sulfate (1)
1-linoleoyl-GPA (18:2)* (1)
Dehydrophytosphingosine* (1)
Nicotianamine (1)
Digalactosylglycerol* (1)
Galactosylglycerol (1)
Pheophytin A (1)
Deoxymugineic acid (1)
Vanillate (1)
2-dimethylaminoethanol (1)
Ferulate (1)
N-acetylproline (1)
3-deoxyoctulosonate (1)
Dopamine (1)
Glutathione, reduced (GSH) (1)
7-methylguanosine (1)

First Public Date

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Modification

4-tetrahydrothiazine-3-carboxylic acid (1)

Study type

Transcription profiling by array (28)
RNA-seq of coding RNA (18)
Unknown experiment type (2)
Plant - High-throughput sequencing (2)
RNA-seq of non coding RNA (2)
ChIP-chip by tiling array (1)
Transcription profiling by tiling array (1)
ATAC-seq (1)
DNA-seq (1)
Methylation profiling by array (1)

Release Date

2023 (23)
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2015 (11)
2010 (10)
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2014 (9)
2019 (9)
2016 (8)
2011 (7)
2017 (7)
2012 (6)
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2013 (4)
2008 (4)
2007 (1)
2005 (1)

Lab affiliation

Normandie Université, UNICAEN, INRAE, UMR 950 EVA, SFR Normandie Végétal (FED4277), 14000 Caen, France (1)
Sugar Beet Physiological Research Institute, Inner Mongolia Agricultural University, Hohhot, China (1)

Tags

xref:PubMed:41034697 (3)
xref:PubMed:33352304 (2)
xref:PubMed:12897252 (1)
xref:PubMed:38373900 (1)
xref:PubMed:36394419 (1)
xref:PubMed:40452414 (1)

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Proteomic analysis of the taproot growth and development stage in Beta vulgaris

In order to understand the changes of proteins during the taproot growth and development of sugar beet, .the two cultivar (SD and BS) at two time points of taproot growth rate were performed proteomic sequencing using iTRAQ.

ORGANISM(S): Beta vulgaris (Sugar beet)

2022-08-12 | PXD031889 | Pride