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Unknown
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Genomics
(379)
Proteomics
(13)
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(1)
Organisms
Andropogon gerardi
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Canis lupus familiaris
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Hepatitis B virus
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Streptococcus dysgalactiae subsp. equisimilis SK1249
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Bos taurus
(61)
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bovine gut metagenome
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Aphididae
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respiratory tract metagenome
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Ovis aries
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gut metagenome
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viral metagenome
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Homo sapiens
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Lactococcus lactis subsp. lactis bv. diacetylactis str. DPC3901
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Pyrenopeziza brassicae
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Bifidobacterium breve DPC 6330
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Lactobacillus helveticus DPC 4571
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Macrococcus sp. DPC7161
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Ligilactobacillus ruminis DPC 6832
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Ligilactobacillus ruminis S23
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Ligilactobacillus salivarius DPC 6502
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Fructobacillus fructosus
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Ligilactobacillus equi DPC 6820
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Listeria phage vB_LmoS_293
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Repository
ENA
(379)
pride
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Mass Spectrometry
(13)
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(11)
Top-down proteomics
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Mass spectrometry
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Instrument Platform
Compact
(2)
6520 Q-TOF LC/MS (Agilent)
(1)
Liquid Chromatography MS - alternating - reverse phase
(1)
Publication Date
2022
(5)
2025
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2019
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2026
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CHEBI ID
CHEBI18107
(1)
CHEBI17895
(1)
CHEBI15724
(1)
CHEBI545687
(1)
CHEBI17748
(1)
CHEBI18386
(1)
CHEBI32816
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CHEBI17310
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CHEBI15544
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CHEBI74767
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CHEBI27747
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CHEBI49092
(1)
Metabolite Name
Citric acid
(2)
DL-O-Tyrosine
(1)
?-Muricholic acid
(1)
?-Hydroxyisovaleric acid
(1)
Sugar alcohol (C6)
(1)
Nicotine amide
(1)
3-Indoxylsulfuric acid
(1)
3-Hydroxyproline
(1)
5'-deoxy-5'(methylthio)adenosine
(1)
N-acetyl muramic acid
(1)
N-acetyl glutamic acid
(1)
3-mercapto-propionate
(1)
Glucosamine 6-phosphate
(1)
N-AcetylProline
(1)
Indole-3-carboxyaldehyde
(1)
Indole 3-acetic acid
(1)
P-Hydroxyphenyllactic acid
(1)
Deserpidine
(1)
5-Hydroxyferulic acid
(1)
2-Methylhippuric acid
(1)
Ribose 5-phosphate
(1)
3-phosphoglyceric acid
(1)
Hexose
(1)
4-Nitrocatechol
(1)
Chitotriose
(1)
Homoserine
(1)
Thiamine monophosphate
(1)
Thiamine
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S-adenosyl-L-methionine
(1)
Pantothenic acid
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First Public Date
2025
(42)
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(38)
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(36)
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(29)
2021
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2014
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2020
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2015
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2019
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2013
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2016
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2012
(2)
Classification
bacteria
(19)
viruses
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Release Date
2020
(97)
2023
(87)
2019
(86)
2021
(85)
2022
(76)
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2018
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2024
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2017
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2014
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2008
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2004
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2007
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2001
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2006
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2003
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2000
(1)
Lab affiliation
Teagasc
(4)
Lab Head, Medical Mycology Lab
(2)
Lab Head, Medical Mycology, Maynooth Univeristy
(2)
Animal Bioscience Department, Teagasc
(1)
Animal Bioscience Department, Teagasc (lab head)
(1)
Department of Biology, Maynooth University, Maynooth, Co. Kildare, Ireland.
(1)
Faculty of Chemistry, Biotechnology and Food Science Norwegian University of Life Sciences Post Office Box 5003 1432, Ås Norway
(1)
Lab head
(1)
Tags
pathogen
(23)
pathogen:bacterium
(19)
xref:PubMed:40315186
(5)
pathogen:virus
(4)
xref:PubMed:26482908
(3)
xref:PubMed:30988346
(3)
xref:PubMed:24470219
(3)
xref:PubMed:33979605
(2)
xref:PubMed:39214080
(2)
xref:PubMed:34234169
(2)
xref:PubMed:20716645
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xref:PubMed:40594195
(2)
xref:PubMed:21803914
(1)
xref:PubMed:35470857
(1)
xref:PubMed:35546662
(1)
xref:PubMed:34666676
(1)
xref:PubMed:35766421
(1)
xref:PubMed:33958675
(1)
xref:PubMed:25573273
(1)
xref:PubMed:25692199
(1)
xref:PubMed:33931718
(1)
xref:PubMed:36277068
(1)
xref:PubMed:39491812
(1)
xref:PubMed:27479136
(1)
xref:PubMed:24138539
(1)
xref:PubMed:32071160
(1)
xref:PubMed:33407093
(1)
xref:PubMed:28947819
(1)
xref:PubMed:23472090
(1)
xref:PubMed:24021155
(1)
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Financial Analysis of Herd Status and Vaccination Practices for Porcine Reproductive and Respiratory Syndrome Virus, Swine Influenza Virus, and
Mycoplasma hyopneumoniae
in Farrow-to-Finish Pig Farms Using a Bio-Economic Simulation Model.
Not available
S-EPMC7680737
|
biostudies-literature
Cite
Impacts of Seasonal Housing and Teat Preparation on Raw Milk Microbiota: a High-Throughput Sequencing Study.
Not available
S-EPMC5203630
|
biostudies-literature
Cite
Draft Genome Sequences of Four Lactococcus lactis Strains Isolated from Diverse Niches, Including Dairy Products, Grass, and Green Peas.
Not available
S-EPMC6715875
|
biostudies-literature
Cite
Food Metagenomic Ring Trial
PRJEB27494
|
ENA
Cite
Dry cow pasture silage mineral concentrations and dry cow mineral requirements and supplementation practices on Irish dairy farms.
Not available
S-EPMC12523131
|
biostudies-literature
Cite
Comparative genomic and metabolic analysis of three Lactobacillus paracasei cheese isolates reveals considerable genomic differences in strains from the same niche.
Not available
S-EPMC5859408
|
biostudies-literature
Cite
Integrated phenotypic-genotypic approach to understand the influence of ultrasound on metabolic response of Lactobacillus sakei.
Not available
S-EPMC5784923
|
biostudies-literature
Cite
Ensifer adhaerens
strain OV14 seed application enhances
Triticum aestivum
L. and
Brassica napus
L. development.
Not available
S-EPMC10943344
|
biostudies-literature
Cite
Metagenomic comparison of the faecal and environmental resistome on Irish commercial pig farms with and without zinc oxide and antimicrobial usage.
Not available
S-EPMC10712031
|
biostudies-literature
Cite
Draft Genome Sequences of Three Lactobacillusparacasei Strains, Members of the Nonstarter Microbiota of Mature Cheddar Cheese.
Not available
S-EPMC5522937
|
biostudies-literature
Cite
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