Sort   by:  
 Page size 
GenomicsGlucocorticoid receptor profiling in IMR90,K562 and U2OS (ChIP-seq)
To identify the sequences responsible for recruitment of Glucocorticoid receptor (GR) to individual loci, we performed ChIP-seq and ChIP-exo that combines chromatin immunoprecipitation with an exonuclease digestion step. We performed these experiments in three cell lines : IMR90 (ATTC:CCL-186), U2O...
ORGANISM(S): Homo sapiens 
2015-02-25 | E-MTAB-2955 | biostudies-arrayexpress
GenomicsGlucocorticoid receptor profiling in U2OS cells expressing GRalpha or GRgamma isoform
To determine whether insertion of a single amino acid had an effect on Glucocorticoid receptor (GR) occupancy, we performed ChIP-seq of GRalpha and GRgamma in the same U2OS osteosarcoma cell lines, upon glucocorticoid treatment. These assays are also part of submission E-MTAB-2955
ORGANISM(S): Homo sapiens 
2014-08-08 | E-MTAB-2731 | biostudies-arrayexpress
TranscriptomicsComparative analysis of single-cell and spatial Nanopore long-read methods
Alternative splicing significantly contributes to transcriptome complexity and has critical implications for cellular functions. Recent advancements in single-cell isolation and capture techniques have enabled high-throughput quantification of gene expression at single-cell resolution. Long-read seq...
ORGANISM(S): Mus musculus 
2025-08-26 | E-MTAB-15190 | biostudies-arrayexpress
UnknownComparative phylogenomic analyses of teleost fish Hox gene clusters: lessons from the cichlid fish Astatotilapia burtoni: comment.
Not available
S-EPMC2246111 | biostudies-literature
UnknownA non-tree-based comprehensive study of metazoan Hox and ParaHox genes prompts new insights into their origin and evolution.
Not available
S-EPMC2842273 | biostudies-literature
GenomicsGenome-wide profiling of Glucocorticoid receptor binding in A549, Nalm-6, MEF WT and MEF GCN5/PCAF double knockout (ChIP-seq)
To identify the sequences responsible for recruitment of Glucocorticoid receptor (GR) to individual loci, we performed ChIP-seq in four cell lines : A549 (ATTC:CCL-185), Nalm-6 (ATCC:CRL-1567), immortalized mouse embryonic fibroblasts (MEFs)(PMID 21131905), and immortalized PCAF-/-; GCN5flox/ MEFs ...
ORGANISM(S): Homo sapiens 
2016-11-10 | E-MTAB-5113 | biostudies-arrayexpress
TranscriptomicssynSTARR-seq with Glucocorticoid Receptor synthetic binding sites in GR18 cell line
We performed STARR-seq with synthetic libraries (synSTARR-seq) in GR18 cell line (derived from U2OS ATTC:HTB-96, stably transfected with an expression construct for GR), upon glucocorticoid (dexamethasone) or vehicle (ethanol) treatment. The synthetic libraries are variants of the glucocorticoid rec...
ORGANISM(S): Homo sapiens 
2018-10-29 | E-MTAB-6737 | biostudies-arrayexpress
Models,MultiomicsLymphoid and myeloid cell specification and transdifferentiation
Blood cells are derived from a common set of hematopoietic stem cells, which differentiate into more specific progenitors of the myeloid and lymphoid lineages, ultimately leading to differentiated cells. This developmental process is controlled by a complex regulatory network involving cytokines and...
8186 | Cell Collective
Sort   by:  
 Page size