Tick-borne encephalitis

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Homo sapiens (114)
Mus musculus (89)
Drosophila melanogaster (48)
Saccharomyces cerevisiae (17)
Schizosaccharomyces pombe (14)
Caenorhabditis elegans (12)
Candida albicans (8)
Arabidopsis thaliana (8)
Hordeum vulgare (7)
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Rattus norvegicus (6)
Bemisia tabaci (5)
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Macrobrachium nipponense (2)
Manihot esculenta (2)
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Organisms

Mus musculus (9)
Tick-borne encephalitis virus (6)
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Ixodes ricinus (4)
Flaviviridae (1)
Powassan virus (1)

Repository

biostudies-arrayexpress (432)
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geo (16)
pride (7)
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Tissue

Blood (2)
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Embryonic stem cell (1)
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Disease

Severe acute respiratory syndrome (2)
Infiltrating ductal carcinoma (2)
Porphyria NOS (2)
Tick-borne encephalitis (2)
Pseudomonas aeruginosa rsmA mutant infected (1)
Post-stasis (1)
Blumeria graminis hordei (powdery mildew) inoculation (1)
Invasive Ductal Carcinoma (1)
Squamous cell carcinoma has accession C0007137 in DiseaseStateDatabase NCI_Thesaurus (1)
Colorectal carcinoma (1)
Head and neck squamous cell carcinoma (1)
Meningitis (1)

Technology Type

Mass Spectrometry (7)
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Mass spectrometry (2)
Mass spectrometry assay (1)
Gel-based experiment (1)
SWATH MS (1)

Instrument Platform

Illumina HiSeq 2000 (18)
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GenePix Professional 4200A [Axon Instruments] (1)
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R (1)
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Publication Date

2014 (70)
2012 (65)
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2016 (25)
2011 (25)
2007 (13)
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2023 (10)
2006 (10)
2022 (9)
2009 (9)
2020 (8)
2017 (8)
2018 (7)
2026 (6)
2024 (6)
2019 (5)
2008 (5)
2005 (4)
2004 (2)

CHEBI ID

CHEBI:16113 (1)

Metabolite Name

2-Aminoethane-1,1,1-Triol (1)
9-(2,3-Dihydroxy-3-Methylbutyl)Furo[3,2-G]Chromen-7-One (1)
2-Methyl-N-[(1-Methylbenzimidazol-2-Yl)Methyl]-7-Oxoazepane-2-Carboxamide (1)
4-Chloro-1H-Indole-3-Acetic Acid (1)
Bisindolylmaleimide Iv (1)
H-D-Arg(No2)-Oh (1)
6-Methyl-5,6-Dihydro-4H-1,3-Thiazin-2-Amine (1)
2-Propylthiazolo[4,5-C]Quinolin-4-Amine (1)
N'-Nitro-L-Arginine (1)
16Alpha_-Hydroxyprednisolone (1)
2-Chloro-6-Fluoro-N-(2-Hydroxy-2-Naphthalen-1-Ylethyl)Benzamide (1)
Nona-2,4,6-Trienoyl-Coa (1)
2-Hydroxypentyl Glucosinolate (1)
2-Methyl-4-Oxo-5-Propylthieno[3,2-C]Pyridine-3-Carboxylic Acid (1)
Galloyl Glucose (1)
N-(2-Methoxyphenyl)-6-(3-Phenylpiperazin-1-Yl)Pyridine-2-Carboxamide (1)
Arginine Chloromethyl Ketone (1)
4-Carbamimidoyl-L-Phenylalanine (1)
16(17)-Epoxy-21-Acetoxy-5-Pregnenolone (1)
Glu Arg Phe (1)
Ethyl-1-(2,4,6-Trihydroxy-3-Isobutyrylphenyl)Butyl]-4-Cyclohexene-1,3-Dione (1)
16,16-Dimethyl Prostaglandin E2 P-(P-Acetamidobenzamido) Phenyl Ester (1)
N-Docosahexaenoyl Aspartic Acid (1)
N-Propyl-L-Arginine (1)
3-[3-[3-Methyl-5-(Oxan-4-Yl)-1,2,4-Triazol-1-Yl]Pyrrolidin-1-Yl]Sulfonylpyridine (1)
1-[1-(3-Methoxyphenyl)-2,5-Dioxopyrrolidin-3-Yl]Piperidine-4-Carboxamide (1)
4-Aminoisoxazolidin-3-One (1)
(E)-8-(2-(4-(Diphenylamino)Benzylidene)Hydrazinyl)-N-Hydroxy-8-Oxooctanamide (1)
Arg Gln Leu (1)
Lys Ala Asn Lys (1)

First Public Date

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2024 (9)
2023 (5)
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2022 (3)
2021 (3)
2020 (3)
2015 (3)
2019 (2)
2017 (2)
2013 (2)
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Classification

viruses (8)

Study type

RNA-seq of coding RNA (142)
RNA-seq of non coding RNA (132)
Transcription profiling by array (53)
ChIP-seq (22)
Other (20)
Methylation profiling by high throughput sequencing (15)
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Ribo-seq (6)
Cell line - High-throughput sequencing (4)
Genotyping by array (4)
DNA-seq (3)
Methylation profiling by array (3)
GRO-seq (2)
ChIP-chip by tiling array (2)
Comparative genomic hybridization by array (2)
RNA-seq of total RNA (2)
Transcription profiling by high throughput sequencing (1)
Transcription profiling by SAGE (1)
Unknown experiment type (1)
MNase-seq (1)
Human - High-throughput sequencing (1)
Translation profiling (1)
High-throughput sequencing (1)
Animal - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
CLIP-seq (1)

Release Date

2014 (98)
2025 (96)
2023 (92)
2022 (80)
2012 (78)
2013 (71)
2021 (70)
2015 (66)
2024 (65)
2010 (58)
2020 (57)
2016 (51)
2019 (49)
2018 (49)
2017 (37)
2011 (37)
2007 (19)
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2003 (7)
2004 (5)
2001 (4)
2002 (2)
2000 (1)
1999 (1)
1998 (1)

Lab affiliation

Biobanking Group, Branch of IBMC "Scientific and Educatioanl Center" (1)
Department of Medical and Translational Biology, Umeå University, 901 87 Umeå, Sweden (1)
Division of clinical sciences (IKVL), Department for infectious diseases, BMC D13, Lund University (1)
IBMC (1)
Icahn School of Medicine at Mount Sinai (1)
Uppsala University, Chemistry-BMC (1)
Zakład Chemii Nieorganicznej i Analitycznej Uniwersytet Medyczny w Białymstoku Mickiewicza 2D, 15-222 Białystok (1)

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Simultaneous Membrane and RNA Binding by Tick-Borne Encephalitis Virus Capsid Protein

Tick-borne encephalitis virus is an enveloped, pathogenic, RNA virus in the family Flaviviridae, genus Flavivirus. Viral particles are formed when the nucleocapsid, consisting of an RNA genome and multiple copies of the capsid protein, buds through the endoplasmic reticulum membrane and acquires ...

2023-01-06 | MTBLS6076 | MetaboLights

Differences in Genetic Diversity of Tick-Borne Flaviviruses

There are very few studies exploring the genetic diversity of tick-borne encephalitis complex viruses. Most of the viruses have been sequenced using capillary electrophoresis, however, very few viruses have been analyzed using deep sequencing to look at the genotypes in each virus population. In thi...

ORGANISM(S): Tick-borne encephalitis virus

2023-12-04 | E-MTAB-12112 | biostudies-arrayexpress

Tick-borne encephalitis virus

Tick-borne encephalitis virus Genome sequencing and assembly

PRJNA587877 | ENA

Tick-borne encephalitis virus

Tick-borne encephalitis virus Genome sequencing and assembly

PRJNA953225 | ENA

Tick-borne encephalitis virus isolate:2025-03-14

Tick-borne encephalitis virus isolate:2025-03-14 Genome sequencing

PRJNA1387130 | ENA

Pseudorabies Virus Triggers Ferritinophagy-Mediated Ferroptosis and Neuroinflammation in Viral Encephalitis

Pseudorabies virus (PRV), a member of the Alphaherpesvirinae subfamily, primarily infects pigs and poses a significant threat to the swine industry. In recent years, emerging PRV variants have been reported to infect humans, predominantly causing encephalitis. Ferroptosis is a recently identified...

2026-04-17 | MTBLS12373 | MetaboLights

Early immunologic events at the tick-host interface

Ixodes species ticks are competent vectors of tick-borne viruses including tick-borne encephalitis and Powassan encephalitis. Tick saliva has been shown to facilitate and enhance viral infection. This likely occurs by saliva-mediated modulation of host responses into patterns favorable for viral i...

ORGANISM(S): Mus musculus

2012-12-21 | E-GEOD-39100 | biostudies-arrayexpress

Tick-borne encephalitis virus

Tick-borne encephalitis virus Genome sequencing

PRJNA1090781 | ENA

Tick-borne encephalitis virus

Tick-borne encephalitis virus Raw sequence reads

PRJNA1174237 | ENA

Dataset of proteins of mouse macrophage cell line PMJ2R samples infected with Tick-borne encephalitis virus, strain Hypr original isolate (part 2)

Dataset for a comparative analysis of protein profiles of three series of mouse macrophage cell line PMJ2R samples including infected with Tick-borne encephalitis virus, strain Hypr original isolate on the second (H2) and sixth day (H6) after infection was carried out using shotgun ultra-high resolu...

ORGANISM(S): Mus musculus (Mouse)

2019-11-11 | PXD016227 | Pride

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