To K F KF - OmicsDI

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Unknown (602)
Transcriptomics (285)
Genomics (55)
Metabolomics (14)
Proteomics (11)

Organisms

Homo sapiens (109)
Mus musculus (90)
Streptomyces coelicolor (18)
Drosophila melanogaster (13)
Rattus norvegicus (12)
Rhizobium leguminosarum (7)
Bacillus amyloliquefaciens (7)
Escherichia coli str. K-12 substr. MG1655 (6)
Saccharomyces cerevisiae (6)
Arabidopsis thaliana (5)
Fagus sylvatica (4)
Porphyromonas gingivalis (3)
Bos taurus (3)
Ovis aries (3)
Triticum aestivum (3)
Gallus gallus (3)
Salmonella enterica (2)
Papio hamadryas (2)
Xenopus laevis (2)
Zea mays (2)
Oryza sativa (2)
Oryza sativa Japonica Group (2)
Escherichia coli K-12 (2)
Sus scrofa (2)
Danio rerio (2)
Cardamine flexuosa (1)
Colletotrichum orbiculare (1)
Sinorhizobium fredii NGR234 (1)
Bradyrhizobium diazoefficiens USDA 110 (1)
Phlebiopsis gigantea (1)

Repository

biostudies-arrayexpress (339)
MetaboLights (13)
pride (6)
MassIVE (3)
EGA (2)
GNPS (1)
PanoramaPublic (1)

Tissue

Permanent cell line cell (2)
Blood cancer cell (1)
Bone cancer cell line (1)
Brain cancer cell line (1)
Breast cancer cell (1)
Breast cancer cell line (1)
Cecum cancer cell line (1)
Cervical cancer cell line (1)
Choroidal melanocyte (1)
Colonic cancer cell (1)
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Early embryonic cell (1)
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Lymph node (1)
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Ovary cancer cell line (1)
Prostate cancer cell (1)
Prostate cancer cell line (1)
Prostate gland (1)
Renal cancer cell line (1)
Skin cancer cell (1)
Sputum (1)
Uterine cervix (1)

Disease

Porphyria NOS (2)
Normal (2)
Perilobar nephrogenic rest (1)
Infected (1)
Bladder tumour (1)
Wilms tumour (1)
Neuroblastoma (1)
Amyotrophic lateral sclerosis (1)
Breast cancer (1)
Colon cancer (1)
Disease free (1)
Malignant neoplasm of ovary (1)
Prostate adenocarcinoma (1)
Uveal melanoma (1)

Technology Type

Mass spectrometry (11)
Mass Spectrometry (6)
Shotgun proteomics (4)
Mass spectrometry assay (2)
NMR spectroscopy assay (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Data-dependent acquisition (1)

Instrument Platform

NextSeq 500 (10)
Illumina HiSeq 2500 (7)
Illumina HiSeq 2000 (7)
Illumina NovaSeq 6000 (6)
Illumina HiSeq 4000 (5)
NextSeq 550 (3)
MA900, Sony (2)
10x Chromium Controller (2)
Illumina Genome Analyzer (2)
Illumina Genome Analyzer II (2)
NextSeq 1000 (2)
NextSeq 2000 (2)
Illumina HiSeq 2000 platform (1)
NanoString nCounter (1)
Axon Instruments GenePix 4000B scanner (1)
Labfors 2 chemostat (Infors AG, Bottmingen, Switzerland) (1)
Axon GenePix4000B (1)
Agilent Scanner (1)
FUJIFILM BAS-5000 scanning hardware (1)
ScanArray 5000 [PerkinElmer] (1)
GeneChip Scanner 3000 [Affymetrix] (1)
Illumina Genome Analyzer IIx (1)
Ion Torrent Proton (1)
DNBSEQ-G400 (1)
MinION (1)
Illumina MiSeq (1)
Illumina HiSeq 1500 (1)
Illumina HiSeq 3000 (1)
LTQ FT (1)
MaXis (1)

Publication Date

2010 (58)
2014 (40)
2013 (37)
2012 (31)
2015 (30)
2011 (30)
2016 (16)
2009 (16)
2008 (14)
2023 (13)
2021 (10)
2022 (9)
2024 (8)
2020 (8)
2007 (7)
2025 (6)
2018 (6)
2006 (6)
2005 (6)
2019 (4)
2026 (3)
2017 (3)
2004 (1)

CHEBI ID

CHEBI:28865 (4)
CHEBI:73024 (4)
CHEBI:16359 (3)
CHEBI:35038 (3)
CHEBI:64563 (3)
CHEBI:70749 (3)
CHEBI:73039 (3)
CHEBI:139138 (2)
CHEBI:143745 (2)
CHEBI:143757 (2)
CHEBI:16010 (2)
CHEBI:16449 (2)
CHEBI:16610 (2)
CHEBI:16708 (2)
CHEBI:16737 (2)
CHEBI:16811 (2)
CHEBI:16870 (2)
CHEBI:17191 (2)
CHEBI:173703 (2)
CHEBI:17687 (2)
CHEBI:17750 (2)
CHEBI:17929 (2)
CHEBI:18257 (2)
CHEBI:182784 (2)
CHEBI:190338 (2)
CHEBI:195271 (2)
CHEBI:21949 (2)
CHEBI:27432 (2)
CHEBI:27997 (2)
CHEBI:28717 (2)

Metabolite Name

Cholic acid (3)
Tris(2-butoxyethyl) phosphate (3)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
13(S)-HODE methyl ester (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
9(10)-EpOME (2)
ADMA (2)
Alpha-linolenic acid|linolenic acid|(9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid (2)
Creatinine (2)
Dibutyl phthalate (DBP) (2)
Elaidic acid (2)
Lyso-PC(16:0) (2)
Monoolein (2)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (2)
Serotonin (2)
Spermidine (2)
Succinate (2)
Taurocholic acid (2)
Taurocholic acid (2)
()-Octanoylcarnitine (1)
(-)-11-Hydroxy-9,15,16-trioxooctadecanoic acid (1)
(3S,5R,6R,7E)-3,5,6-Trihydroxy-7-megastigmen-9-one (1)
(E)-3-methylglutaconic acid (1)
(R)-(+)-2-Pyrrolidone-5-carboxylic acid (1)
(R)-4-((3R,4R,5S,8S,9S,10R,13R,14S,17R)-3,4-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
(R)-4-((3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-3,7,12-trihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
1,2-Benzisothiazol-3(2H)-one (1)
1,3,5-triprop-2-enyl-1,3,5-triazaperhydroine-2,4,6-trione (1)

Study type

Transcription profiling by array (171)
RNA-seq of coding RNA (47)
ChIP-seq (42)
Comparative genomic hybridization by array (13)
Other (8)
Methylation profiling by high throughput sequencing (8)
RNA-seq of coding RNA from single cells (6)
ChIP-chip by array (5)
ChIP-chip by tiling array (4)
Transcription profiling by RT-PCR (4)
RNA-seq of non coding RNA (4)
Animal - High-throughput sequencing (3)
CLIP-seq (3)
DNA-seq (3)
Methylation profiling by array (3)
CUT&RUN (3)
Unknown experiment type (2)
Cell line - High-throughput sequencing (2)
Transcription profiling by tiling array (2)
Translation profiling (1)
Proteomic profiling by mass spectrometer (1)
MicroRNA profiling by high throughput sequencing (1)
ATAC-seq (1)
RIP-seq (1)
MicroRNA profiling by array (1)

Release Date

2021 (85)
2022 (77)
2023 (69)
2010 (65)
2025 (60)
2014 (60)
2024 (59)
2020 (59)
2018 (57)
2013 (47)
2015 (46)
2012 (41)
2016 (40)
2011 (38)
2019 (36)
2017 (24)
2009 (23)
2008 (22)
2026 (11)
2007 (8)
2006 (7)
2005 (6)
2004 (1)

Lab affiliation

Centre for Proteomic Research, Biological Sciences, University of Southampton (1)
Chemistry Department, University of Minnesota (1)
European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI) (1)
Professor, School of Biomolecular and Biomedical Science, University College Dublin, Belfield, Dublin 4, Ireland (1)
UCSF (1)
University of Kaiserslautern, Cell Biology, Germany (1)

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Penta-potassium praseodymium(III) dilithium deca-fluoride, K(5)PrLi(2)F(10).

Not available

S-EPMC2971201 | biostudies-literature

Dynamic Viscosity of the NaF-KF-NdF₃ Molten System.

Not available

S-EPMC9324551 | biostudies-literature

Penta-potassium europium(III) dilithium deca-fluoride, K(5)EuLi(2)F(10).

Not available

S-EPMC2971037 | biostudies-literature

Origin of Salt Effects in SN2 Fluorination Using KF Promoted by Ionic Liquids: Quantum Chemical Analysis.

Not available

S-EPMC8510065 | biostudies-literature

Simultaneous morphology manipulation and upconversion luminescence enhancement of β-NaYF4:Yb3+/Er3+ microcrystals by simply tuning the KF dosage.

Not available

S-EPMC4522666 | biostudies-literature

Chromatin immunoprecipitation of human erythroleukemia cell line K-562 with H3K4me2, H3K4me3, H3ac, H4ac, Histone H2B and Histone H3 antibodies using an ENCODE array

ENCODE ChIP-chip study using human myelogenous leukemia cell line K-562 and anti histone H3K4me2 (Abcam; ab7766); H3K4me3 (Abcam; ab8580); H3ac (Upstate; 06-599); H4ac (Upstate; 06-866); Histone H2B (Abcam: ab1790) and Histone H3 (Abcam: ab1791) antibodies. Each antibody experiment was conducted in ...

ORGANISM(S): Homo sapiens

2006-09-01 | E-TABM-140 | biostudies-arrayexpress

Transcription analysis by RNAseq of adult wheat after inoculation with Puccinia graminis f. sp. tritici

The RNA sequencing analysis was undertaken to investigate the transcriptomic changes in adult wheat inoculated with Puccinia graminis f. sp. tritici the causal agent of stem rust disease. The project firstly aims to compare gene expression in one susceptible wheat line with two wheat lines exhibitin...

ORGANISM(S): Triticum aestivum

2022-10-30 | E-MTAB-9681 | biostudies-arrayexpress

The adult boar testicular and epididymal transcriptomes

Background - Mammalians gamete production takes place in the testis but when they exit this organ, although spermatozoa have a specialized and distinct morphology, they are immotile and infertile. It is only after their travel in the epididymis that sperm acquire their motility and fertility. Epidid...

ORGANISM(S): Sus scrofa

2010-06-24 | E-GEOD-15614 | biostudies-arrayexpress

Enantioselective radiosynthesis of positron emission tomography (PET) tracers containing [¹⁸F]fluorohydrins.

Not available

S-EPMC12790334 | biostudies-literature

Metabolomics to elucidate the effects of novel sustainable feed additives in the feed of farmed salmon (HoloFood Trial C - blue mussel ensilage-dose response)

Testing the effect of blue mussel ensilage as a novel cost-efficient protein feed source for Atlantic salmon feed. Fermentation of novel raw materials for fish feed is a new practice with little prior experience of direct relevance to aquaculture and fish farming. In Trial C, alternative processi...

2023-06-13 | MTBLS4384 | MetaboLights

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