To Sarah S - OmicsDI

Show results for

Unknown (889)
Transcriptomics (561)
Genomics (425)
Proteomics (224)
Metabolomics (34)
Models (11)
Genomic (6)
Other (2)
Multiomics (2)

Organisms

Homo sapiens (553)
Drosophila melanogaster (212)
Mus musculus (193)
Saccharomyces cerevisiae (23)
Arabidopsis thaliana (13)
Rattus norvegicus (10)
Zea mays (6)
Escherichia coli (6)
Vitis vinifera (5)
Bos taurus (5)
Danio rerio (5)
Taeniopygia guttata (4)
Caenorhabditis elegans (4)
Macaca mulatta (2)
Entamoeba histolytica (2)
Anopheles gambiae (2)
Mycobacterium tuberculosis (2)
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 (2)
Staphylococcus aureus (2)
Pseudomonas putida KT2440 (2)
Glycine max (2)
Ovis aries (2)
Mycobacterium tuberculosis H37Rv (2)
Plasmodium falciparum (2)
Escherichia coli str. K-12 substr. MG1655 (2)
Candida albicans (2)
Rhinolophus ferrumequinum (1)
Acipenser transmontanus (1)
Ixodes ricinus (1)
Pseudomonas syringae (1)

Organisms

Homo sapiens (2)

Repository

biostudies-arrayexpress (718)
EGA (263)
pride (137)
MassIVE (69)
MetaboLights (30)
BioModels (8)
jPOST (8)
PanoramaPublic (8)
dbGaP (6)
GNPS (4)
PAXDB (3)
Cell Collective (2)
LINCS (2)
ENA (2)
FAIRDOMHub (1)
geo (1)
GPMDB (1)

Tissue

Cell culture (28)
Liver (12)
Blood (8)
Skeletal muscle (8)
Heart (7)
Brain (6)
Lung (6)
Neutrophil (6)
Hepatocyte (4)
Kidney (4)
Muscle (4)
Spleen (4)
Stromal cell (4)
Blood plasma (3)
Cerebellum (3)
Epithelial ovarian cancer cell (3)
Leaf (3)
Macrophage (3)
Plant cell (3)
Skin (3)
Subcutaneous adipose tissue (3)
Abdominal adipose tissue (2)
Adrenal gland (2)
Blood cell (2)
Blood serum (2)
Brown adipose tissue (2)
Fibroblast (2)
Lens (2)
Monocyte (2)
Pancreas (2)

Disease

Cardiovascular system disease (7)
Normal (4)
Simpson-Golabi-Behmel syndrome type 1 (4)
Glioblastoma (3)
Rheumatoid arthritis (2)
Breast cancer (2)
Disease free (2)
Malignant neoplasm of ovary (2)
Acute pancreatitis (1)
Replicate control (1)
T. circumcincta infection (1)
Cryptozoospermia (1)
Liposarcoma (1)
Partially decidualised (1)
Mixoid liposarcoma (1)
Carcinoma (1)
Diabetes mellitus type 2 (1)
Not Available (1)
Acute leukemia (1)
Adult respiratory distress syndrome (1)
Cardiovascular system (1)
Chronic lymphocytic leukemia (1)
Colon mucinous adenocarcinoma (1)
Congenital toxoplasmosis (1)
Esophageal carcinoma (1)
Essential thrombocythemia (1)
Human immunodeficiency virus infectious disease (1)
Lymphoma (1)
Mucinous adenocarcinoma (1)
Multiple myeloma (1)

Technology Type

Mass Spectrometry (137)
Shotgun proteomics (57)
Mass spectrometry (25)
Illumina HiSeq 2000 (9)
Illumina 15K (8)
Illumina Genome Analyzer II (4)
Mass spectrometry assay (3)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (2)
Illumina HiSeq 2500, ILLUMINA (2)
Illumina MiSeq (2)
NMR spectroscopy (2)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
Affymetrix 6.0 (1)
Affymetrix 6.0, Illumina_670k - Illuminus, Illumina 1.2M (1)
Affymetrix/Illumina (1)
ILLUMINA, Illumina HiSeq 2000 (1)
ISelect Beadchip (1)
Illumina (various), Illumina (Various) (1)
Illumina 1.2M, Affymetrix 6.0 (1)
Illumina 1.2M, Affymetrix 6.0, Affymetrix 6.0 - CHIAMO (1)
Illumina Genome Analyzer IIx, Illumina Genome Analyzer II, Affymetrix U219 (1)
Illumina HiSeq 2500, Illumina HiSeq 2000 (1)
Illumina HumanExome-12v1_A (1)
Illumina Omni 2.5, Illiumina Omni 2.5 (1)
Illumina_670k - Illuminus, Affymetrix 6.0, Illumina 1.2M (1)
Life Tech - Solid (1)
DNA sequencing (1)
Fluorescence intensity (1)
PCR (1)
RNA-seq (1)

Instrument Platform

Illumina NovaSeq 6000 (32)
Illumina HiSeq 4000 (20)
NextSeq 500 (14)
Illumina HiSeq 2500 (11)
Illumina HiSeq 2000 (11)
NextSeq 2000 (5)
Bio-Rad CFX96 Real-time System (2)
Illumina Genome Analyzer IIx (2)
Illumina NovaSeq X (2)
Illumina HiSeq 1000 (2)
Hamamatsu Nanozoomer S60 (1)
Illumina NOVAseq 6000 (1)
Python (1)
Nugen Ovation SPIA; Wafergen’s Apollo liquid handler; KAPA Hyper Prep Library Kit (1)
QIAGEN TissueLyser II (1)
Isoflurane euthanasia chamber (1)
Qubit 4 Fluorometer (1)
Nikon Eclipse Ti2 with brightfield and fluorescence capacity (TRITC) (1)
Leica Biosystems Cryostat (1)
BD LSRFortessa (1)
MACS Whole Skin Dissociation Kit (1)
Axon-GenePix 4100A (1)
MACS (1)
10X Genomics Chromium (1)
MoFlo XDP (Beckman Coulter) or a FACSAria II (Becton Dickinson) (1)
Fluidigm C1 autoprep system (1)
Lightwave (1)
ABI SOLiD v4 (1)
Becton Dickinson INFLUX (1)
FACSAria Fusion (1)

Publication Date

2013 (204)
2011 (78)
2015 (71)
2012 (64)
2016 (61)
2010 (57)
2025 (50)
2022 (44)
2014 (41)
2024 (40)
2021 (39)
2020 (38)
2026 (37)
2008 (36)
2023 (34)
2018 (25)
2009 (21)
2017 (17)
2019 (13)
2007 (11)
2006 (4)
2005 (1)

UNIPROT ID/AC

10090.ENSMUSP00000072775 (2)
10090.ENSMUSP00000079944 (2)
10090.ENSMUSP00000105709 (2)
10090.ENSMUSP00000117461 (2)
10090.ENSMUSP00000127198 (2)
10090.ENSMUSP00000132065 (2)
10090.ENSMUSP00000132102 (2)
10090.ENSMUSP00000136357 (2)
10090.ENSMUSP00000136375 (2)
10090.ENSMUSP00000136544 (2)
10090.ENSMUSP00000137171 (2)
10090.ENSMUSP00000137236 (2)
1433B_MOUSE (2)
1433E_MOUSE (2)
1433Z_MOUSE (2)
2AAA_MOUSE (2)
3BHS1_MOUSE (2)
3HIDH_MOUSE (2)
4F2_MOUSE (2)
6PGD_MOUSE (2)
6PGL_MOUSE (2)
A0A087WQ89_MOUSE (2)
A0A140T8T4_MOUSE (2)
A0A1W2P6N8_MOUSE (2)
AACS_MOUSE (2)
AAK1_MOUSE (2)
AATC_MOUSE (2)
ABCA5_MOUSE (2)
ABHEB_MOUSE (2)
ACAD9_MOUSE (2)

CHEBI ID

CHEBI:15354 (8)
CHEBI:67079 (2)
CHEBI:10983 (1)
CHEBI:10986 (1)
CHEBI:11305 (1)
CHEBI:11805 (1)
CHEBI:11851 (1)
CHEBI:11892 (1)
CHEBI:12876 (1)
CHEBI:128769 (1)
CHEBI:1296 (1)
CHEBI:13115 (1)
CHEBI:13705 (1)
CHEBI:1387 (1)
CHEBI:1463 (1)
CHEBI:14649 (1)
CHEBI:15033 (1)
CHEBI:15035 (1)
CHEBI:15343 (1)
CHEBI:15347 (1)
CHEBI:15355 (1)
CHEBI:15361 (1)
CHEBI:15372 (1)
CHEBI:15374 (1)
CHEBI:15377 (1)
CHEBI:15379 (1)
CHEBI:15384 (1)
CHEBI:15389 (1)
CHEBI:15414 (1)
CHEBI:15420 (1)

Metabolite Name

Citric acid (5)
Glycine (5)
Phenylalanine (5)
Taurine (5)
Adenine (4)
Alanine (4)
Creatine (4)
Cysteine (4)
Histidine (4)
Isoleucine (4)
Leucine (4)
Lysine (4)
Myo-inositol (4)
Serine (4)
Threonine (4)
Tyrosine (4)
Uracil (4)
Valine (4)
Xanthosine (4)
3-phosphoglycerate (3)
Adenosine (3)
Adenosine triphosphate (3)
Biotin (3)
Carnitine (3)
Choline (3)
Eriodictyol (3)
Folic acid (3)
Glutaric acid (3)
Glycine (3)
Guanosine (3)

First Public Date

2024 (1)
2017 (1)

Modelling Approach

Ordinary differential equation model (3)
Computational model (1)
Constraint-based model (1)
Logical model (1)
Other (1)

Lab affiliation

Laboratoire de Spectrométrie de Masse BioOrganique, Analytical Science department, IPHC, CNRS, Strasbourg University, UMR7178, Strasbourg, France (16)
Helmholtz-Centre for Environmental Research – UFZ, Department of Molecular Toxicology (4)
Cedars-Sinai Medical Center (3)
Department of Biochemistry, Vanderbilt University, USA (3)
1. Laboratoire de Spectrométrie de Masse BioOrganique, IPHC UMR 7178, Université de Strasbourg, CNRS, 67000 Strasbourg, France 2. Infrastructure Nationale de Protéomique ProFI – FR2048, 67087 Strasbourg, France (2)
BioOrganic Mass Spectrometry laboratory (LSMBO) Institut Plurisciplinaire Hubert Curien University of Strasbourg. France (2)
CVRTI, University of Utah (2)
Centre for Inflammation Research, Institute for Regeneration and Repair, University of Edinburgh, Edinburgh, UK. (2)
Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Germany (2)
Department of Biochemistry and Molecular Biology Indiana University School of Medicine Indianapolis, IN (2)
Helmholtz-Centre for Environmental Research - UFZ, Department of Molecular Toxicology (2)
IPHC (LSMBO - Laboratoire de Spectrométrie de Masse Bio-Organique), UMR 7178, Université de Strasbourg, CNRS (2)
Institut Cochin, Inserm U 1016, CNRS UMR 8104, Université Paris Cité. (2)
Laboratoire de Spectrométrie de Masse BioOrganique (LSMBO), Université de Strasbourg, CNRS, IPHC UMR 7178, 67087 Strasbourg Cedex 2, France (2)
Laboratoire de Spectrométrie de Masse BioOrganique (LSMBO), Université de Strasbourg, CNRS, IPHC UMR 7178, 67087 Strasbourg, France (2)
Laboratoire de Spectrométrie de Masse BioOrganique (LSMBO), Université de Strasbourg,CNRS, IPHC UMR 7178, 67087 Strasbourg,France (2)
Laboratoire de Spectrométrie de Masse BioOrganique, Analytical Science department, IPHC, CNRS, Strasbourg University, UMR7178, Strasbourg, france (2)
Laboratory of Ageing and Pharmacology, Kolling Institute, The University of Sydney (2)
Molecular Structure of Cell Signalling Laboratory, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK (2)
University of Dundee, Scool of Life Sciences, Department of Molecular, Cellular andDevelopmental biology (2)
University of Graz, Pharmaceutical Sciences, Pharmaceutical Chemistry (2)
1. Laboratoire de Spectrométrie de Masse BioOrganique, IPHC UMR 7178, Université de Strasbourg, CNRS, 67000 Strasbourg, France 2. Infrastructure Nationale de Protéomique ProFI – FR2048, 67087 Strasbourg, France (1)
Alfred E. Mann Department of Biomedical Engineering, University of Southern California, Los Angeles, CA, 90089, USA Department of Stem Cell Biology and Regenerative Medicine, Keck School of Medicine of USC, Los Angeles, CA, 90033, USA (1)
Assistant Professor, Cedars-Sinai Medical Center, Cardiology (1)
Assistant Professor, Gene Expression & Regulation Program, Wistar Institute Cancer Center, Philadelphia PA, USA (1)
Associate Professor, Cedars-Sinai Medical Center, Surgery (1)
Barts Cancer Institute, Queen Mary University of London, Charterhouse Square, London EC1M 6BQ. (1)
BioOrganic Mass Spectrometry laboratory (LSMBO) Institut Plurisciplinaire Hubert Curien University of Strasbourg. France (1)
BioOrganique Mass Spectrometry Lab (LSMBO), Institut Pluridisciplinaire hubert Curien (IPHC) UMR7178, CNRS, University of Strasbourg (1)
Biology Department Pennsylvania State University (1)

IsPrivate

False (8)

Model Flag

Non Kinetic (1)

Submitter Keywords

FAIR-AIML (1)
Machine Learning Model (1)
Not Peer Reviewed (1)

Study type

Transcription profiling by array (293)
ChIP-seq (149)
ChIP-chip by tiling array (78)
RNA-seq of coding RNA (73)
RNA-seq of coding RNA from single cells (27)
Methylation profiling by array (18)
Other (11)
Comparative genomic hybridization by array (10)
ChIP-chip by array (7)
Methylation profiling by high throughput sequencing (7)
RNA-seq of total RNA (6)
ATAC-seq (5)
Transcription profiling by RT-PCR (4)
DNA-seq (4)
RNA-seq of non coding RNA (4)
Cell line - High-throughput sequencing (3)
Unknown experiment type (2)
RNAi profiling by array (2)
Genotyping by array (2)
Spatial transcriptomics by high-throughput sequencing (2)
Hi-C (2)
CUT&RUN (2)
Baseline (1)
Human - Methylation microarray (1)
Human - Single-cell sequencing (1)
High-throughput sequencing (1)
4C (1)
Single nucleus RNA sequencing (1)
MicroRNA profiling by array (1)

Release Date

2013 (221)
2015 (108)
2022 (106)
2023 (101)
2025 (100)
2024 (96)
2021 (92)
2020 (88)
2011 (87)
2018 (85)
2016 (78)
2012 (71)
2014 (69)
2019 (68)
2010 (63)
2017 (62)
2008 (36)
2026 (31)
2009 (26)
2007 (12)
2006 (5)
2005 (1)

Previous page
1 / 216
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 216
Next page

Sort by:

Relevance

Page size

Regulation of MST complexes and activity via SARAH domain modifications.

Not available

S-EPMC9540434 | biostudies-literature

Metabolomic and Metataxonomic Fingerprinting of Human Milk Suggests Compositional Stability over a Natural Term of Breastfeeding to 24 Months

Sparse data exist regarding the normal range of composition of maternal milk beyond the first postnatal weeks. This single timepoint, observational study in collaboration with the 'Parenting Science Gang' citizen science group evaluated the metabolite and bacterial composition of human milk from 62 ...

2022-02-11 | MTBLS1370 | MetaboLights

New type of interaction between the SARAH domain of the tumour suppressor RASSF1A and its mitotic kinase Aurora A.

Not available

S-EPMC6447619 | biostudies-literature

Multiple reaction monitoring assays for large-scale quantitation of proteins from 20 mouse organs and tissues

We developed 7,184 quantitative multiple reaction monitoring mass spectrometry (MRM-MS) assays that measure 2,118 unique proteins in 20 mouse organs and tissues to enable system-level analysis of protein expression in mice. Targets for assay development were selected by untargeted MS analysis, and c...

ORGANISM(S): Mus musculus (Mouse)

2024-01-03 | PXD021333 | Pride

Hand exercises for patients with rheumatoid arthritis: an extended follow-up of the SARAH randomised controlled trial.

Not available

S-EPMC5775458 | biostudies-literature

Examination of human osteoarchaeological remains as a feasible source of polar and apolar metabolites to study past conditions

Metabolomics is a modern tool that aids in our understanding of the molecular changes in organisms. Archaeological science is a branch of archaeology that explores different archaeological materials using modern analytical tools. Human osteoarchaeological material are a frequent finding in archaeolo...

2022-07-04 | MTBLS4437 | MetaboLights

Crystallization and preliminary X-ray crystallographic study of the human MST2 SARAH domain.

Not available

S-EPMC3212461 | biostudies-literature

Radioembolisation with yttrium‒90 microspheres versus sorafenib for treatment of advanced hepatocellular carcinoma (SARAH): study protocol for a randomised controlled trial.

Not available

S-EPMC4265525 | biostudies-literature

Botanical collections as an opportunity to explore nature through the time: An untargeted metabolomic study in historical and modern Nicotiana leaves

The living and dried specimens in botanical collections play an important role in society for scientific and recreational purposes, offering the opportunity to obtain both macroscopic and molecular information for individual plants, ecosystems, and environmental studies. Untargeted metabolomics i...

2024-03-06 | MTBLS4564 | MetaboLights

Plasmid-encoded toxin defence mediates mutualistic microbial interactions

Gut environments harbour dense microbial ecosystems in which plasmids are widely distributed. Plasmids facilitate the exchange of genetic material among microorganisms while enabling the transfer of a diverse array of accessory functions. However, their precise impact on microbial community compo...

2023-08-10 | MTBLS7248 | MetaboLights

Previous page
1 / 216
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 216
Next page

Sort by:

Relevance

Page size

2152 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

UNIPROT ID/AC

CHEBI ID

Metabolite Name

First Public Date

Modelling Approach

Lab affiliation

Tags

IsPrivate

Model Flag

Submitter Keywords

Study type

Release Date

OmicsDI is part of the ELIXIR infrastructure

Tweets