Tong Xiang X - OmicsDI

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Unknown (484)
Proteomics (20)
Metabolomics (5)
Transcriptomics (2)
Genomics (2)

Organisms

Homo sapiens (15)
Thermococcus eurythermalis (4)
Mus musculus (2)
Staphylococcus aureus (2)
Mycobacterium tuberculosis (1)

Repository

pride (10)
iProX (9)
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biostudies-arrayexpress (2)
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Tissue

Cell culture (4)
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Disease

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Mass Spectrometry (10)
Shotgun proteomics (6)
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Gel-based experiment (2)
Mass spectrometry assay (1)
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Bottom-up proteomics (1)
Data-independent acquisition (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
Illumina HiSeq 2000 (1)
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Liquid Chromatography MS - negative - hilic (1)
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Publication Date

2023 (6)
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2017 (2)
2014 (1)
2012 (1)
2021 (1)
2019 (1)
2016 (1)

CHEBI ID

CHEBI:15354 (2)
CHEBI:15698 (2)
CHEBI:15741 (2)
CHEBI:15891 (2)
CHEBI:16449 (2)
CHEBI:16919 (2)
CHEBI:17859 (2)
CHEBI:18132 (2)
CHEBI:18300 (2)
CHEBI:26986 (2)
CHEBI:30915 (2)
CHEBI:43355 (2)
CHEBI:78320 (2)
CHEBI:10043 (1)
CHEBI:110187 (1)
CHEBI:1148 (1)
CHEBI:14336 (1)
CHEBI:144637 (1)
CHEBI:15344 (1)
CHEBI:15366 (1)
CHEBI:15373 (1)
CHEBI:15428 (1)
CHEBI:15534 (1)
CHEBI:15551 (1)
CHEBI:15611 (1)
CHEBI:15676 (1)
CHEBI:15682 (1)
CHEBI:15724 (1)
CHEBI:15727 (1)
CHEBI:15760 (1)

Metabolite Name

(15Z)-tetracosenoic acid (1)
1,3,5(10)-Estratrien-3,17.beta.-diol 17-glucosiduronate (1)
1-Methylhistidine (1)
1-Methylnicotinamide (1)
1-deoxy-D-xylulose 5-phosphate (1)
1-palmitoyl-2-oleoyl-sn-glycero-3-phosphate (1)
1-stearoyl-sn-glycero-3-phosphocholine (1)
15-deoxy-Delta(12,14)-prostaglandin J2 (1)
2'-O-methylinosine (1)
2'-O-methyluridine (1)
2'-deoxyinosine (1)
2-Hydroxy-3-methylbutyrate (1)
2-Hydroxybutyrate (1)
2-Hydroxyisobutyrate (1)
2-Isopropylmalic acid (1)
2-Oxoglutarate (1)
2-aminoadipic acid (1)
2-hydroxypropanoic acid (1)
2-oxoglutaric acid (1)
3,4-Dihydroxyphenylpropionic acid (1)
3-Hydroxybutyrate (1)
3-Indoxylsulfate (1)
3-Phenyllactate (1)
3-methylcytidine (1)
4-Hydroxy-D-proline (1)
4-Pyridoxic acid (1)
5'-S-methyl-5'-thioadenosine (1)
5,6-dihydrothymine (1)
Acetate (1)
Acetoacetate (1)

Study type

Transcription profiling by array (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (88)
2025 (80)
2023 (64)
2024 (58)
2021 (45)
2020 (29)
2018 (21)
2019 (19)
2026 (14)
2017 (13)
2015 (13)
2014 (12)
2016 (11)
2012 (5)
2013 (5)
2010 (3)
2009 (3)
2011 (1)
2008 (1)
2005 (1)

Lab affiliation

Laboratory of Microbiology Oceanography, State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, State Key Laboratory of Ocean Engineering, Shanghai Jiao Tong University, School of Oceanography, Shanghai JiaoTong University (4)
Department of Laboratory Medicine, Ren Ji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China. (2)
Shanghai Center for Systems Biomedicine, Key Laboratory of Systems Biomedicine (Ministry of Education), Shanghai Jiao Tong University, Shanghai 200240, China (2)
China-Japan Friendship Hospital, Beijing, China (1)
China-Japan Friendship Hospital, China (1)

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Effects of Yulin Tong Bu formula on modulating gut microbiota and fecal metabolite interactions in mice with polycystic ovary syndrome

BACKGROUND: Polycystic ovarian syndrome (PCOS) is a common endocrine disorder characterized by hyperandrogenism, ovarian dysfunction and polycystic ovarian morphology. Gut microbiota dysbiosis and metabolite are associated with PCOS clinical parameters. Yulin Tong Bu formula (YLT...

2023-02-02 | MTBLS6736 | MetaboLights

He Xiang - BfrB - Systematic Identification of Mycobacterium tuberculosis Effectors Reveals that BfrB Suppresses Innate Immunity

To identify the macrophage binding partner of Mtb BfrB, we selected and purified BfrB tagged with GST, and incubated it with THP-1 lysates before performing GST Pullodwn. Then the eluted protein were examined by sliver stain. Using mass spectrometry, we identified a protein with an apparent molecula...

ORGANISM(S): Homo sapiens (Human) Mycobacterium tuberculosis

2017-10-17 | PXD006929 | Pride

Bfrb rps3

Effects of continuous positive airway pressure on neurocognitive architecture and function in patients with obstructive sleep apnoea: study protocol for a multicentre randomised controlled trial.

Not available

S-EPMC5729992 | biostudies-literature

Mtb BfrB interacted proteins - Systematic Identification of Mycobacterium tuberculosis Effectors Reveals that BfrB Suppresses Innate Immunity

To identify the protein interacted with Mtb BfrB, we performed the GST Pulldown assay followed by MS.We identified that Mtb BfrB interact with human RPS3.

ORGANISM(S): Homo sapiens (Human)

2017-10-17 | PXD006927 | Pride

Bfrb interact with rps3

Madecassic acid, the contributor to the anti-colitis effect of madecassoside, enhances the shift of Th17 toward Treg cells via the PPARγ/AMPK/ACC1 pathway.

Not available

S-EPMC5386545 | biostudies-literature

Aquaporin-8 ameliorates hepatic steatosis through farnesoid X receptor in obese mice.

Not available

S-EPMC10130924 | biostudies-literature

MRI-based habitat radiomics combined with vision transformer for identifying vulnerable intracranial atherosclerotic plaques and predicting stroke events: a multicenter, retrospective study.

Not available

S-EPMC11999680 | biostudies-literature