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TranscriptomicsRoot gene expression profiles of two maize inbred lines (Lo5 and T250) in response to nitrate treatment
Among the mineral elements necessary for plant growth, nitrogen (N) is the macronutrient required in larger amounts. The optimization of N use efficiency (NUE) in maize could be obtained through both genetic improvement and agronomic practices in order to enhance production and reduce the negative i...
ORGANISM(S): Zea mays 
2014-05-19 | E-GEOD-49681 | biostudies-arrayexpress
TranscriptomicsGeneration of a transcriptome catalog for global analysis of gene expression in Ampelomyces quisqualis during mycoparasitization
In this work, 454 pyrosequencing was used to build up a 3M-bM-^@M-^Y cDNA fragment library from a normalized library constructed from pooled RNA samples extracted at different stages of A. quisqualis mycoparasitization process (recognition, early and late parasitization). An extensive catalogue of u...
ORGANISM(S): Ampelomyces quisqualis 
2014-07-11 | E-GEOD-22888 | biostudies-arrayexpress
TranscriptomicsInterference with ethylene perception at receptor level sheds light on auxin and transcriptional circuits associated with climacteric ripening of apple fruit (Malus x domestica Borkh.)
Apple (Malus x domestica Borkh.) is a model fruit species to study the metabolic changes occurring at the onset of ripening as well the physiological mechanism governed by the hormone ethylene. In this survey, to dissect the climacteric interplay in apple, a multidisciplinary approach was employed. ...
ORGANISM(S): Malus domestica 
2016-08-23 | E-GEOD-78745 | biostudies-arrayexpress
TranscriptomicsIntegrative approach combining transcriptomic assay with physical and metabolite analysis reveal novel clues about the regulatory mechanism governing the climacteric ripening physiology in apple (Malus x domestica Borkh.) [WGAA]
Apple (Malus x domestica Borkh.) is a model fruit species to study the metabolic changes occurring at the onset of ripening as well the physiological mechanism governed by the hormone ethylene. In this survey, to dissect the climacteric interplay in apple, a multidisciplinary approach was employed. ...
ORGANISM(S): Malus domestica 
2016-08-23 | E-GEOD-78744 | biostudies-arrayexpress
TranscriptomicsExpression profiles in alcohol-associated hepatocellular carcinoma
Alcohol is a major risk factor for hepatocellular carcinoma (HCC) although the mechanisms underlying the alcohol-related liver carcinogenesis are still poorly understood. Alcohol is known to increase hepatocarcinogenesis possibly by inducing aberrant DNA methylation through the reduced provision of ...
ORGANISM(S): Homo sapiens 
2015-05-05 | E-GEOD-59259 | biostudies-arrayexpress
TranscriptomicsPhysical mapping of bread wheat chromosome 5A: an integrated approach
The huge size, the redundancy and the great repeated portion of the bread wheat genome [Triticum aestivum (L.)], placed it among the most difficult species to be sequenced and dissected at the genetic, structural and evolutionary levels. To overcome the limitations, a strategy based on the genome co...
ORGANISM(S): Triticum aestivum 
2015-08-13 | E-GEOD-66996 | biostudies-arrayexpress
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