Tripathi A A - OmicsDI

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Unknown (2107)
Transcriptomics (50)
Proteomics (34)
Genomics (9)
Metabolomics (7)

Organisms

Homo sapiens (32)
Andropogon gerardi (30)
Bacteria (30)
Canis lupus familiaris (30)
Cnidaria (30)
Cricetulus griseus (30)
Eukaryota (30)
Fasciola (30)
Hepatitis B virus (30)
Human betaherpesvirus 5 (30)
Madurella mycetomatis (30)
Mesocricetus auratus (30)
Miscanthus x giganteus (30)
Mus musculus (30)
Mycobacterium tuberculosis (30)
Orthoflavivirus (30)
Panicum virgatum (30)
Platyhelminthes (30)
Pseudomonas aeruginosa AES-1R (30)
Rattus norvegicus (30)
Rattus rattus (30)
Rhodococcus jostii RHA1 (30)
Mus musculus (12)
Oryza sativa Indica Group (2)
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Rattus norvegicus (1)

Organisms

Calotropis procera (2)
Arabidopsis thaliana (1)
soil metagenome (1)
Homo sapiens (1)

Repository

biostudies-arrayexpress (52)
pride (30)
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geo (2)
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Tissue

Cell culture (7)
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Disease

Disease free (2)
Abnormal breast morphology (1)
Amyotrophic lateral sclerosis (1)
Breast cancer (1)
COVID-19 (1)
Colon cancer (1)
Frontotemporal dementia (1)
Head and neck squamous cell carcinoma (1)
Hydrocephalus (1)
Malaria (1)
Multiple sclerosis (1)
Neuroblastoma (1)
Plasmodium falciparum malaria (1)
Schizophrenia (1)

Technology Type

Mass Spectrometry (30)
Shotgun proteomics (18)
Bottom-up proteomics (6)
Affinity purification coupled with mass spectrometry proteomics (5)
Mass spectrometry (4)
Data-dependent acquisition (3)
Gel-based experiment (2)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)
SRM/MRM (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (4)
6545 Q-TOF LC/MS (2)
Agilent 1290 Infinity II UPLC (2)
Liquid Chromatography MS - positive - hilic (2)
Liquid Chromatography MS - negative - reverse phase (2)
Ion Chef™ System and Ion S5™ System or Ion GeneStudio™ S5 Systems. (1)
Ion Torrent S5 XL (1)
NextSeq 500 (1)
MaXis (1)
Liquid Chromatography MS - negative - hilic (1)

Publication Date

2015 (14)
2014 (12)
2021 (7)
2012 (7)
2024 (7)
2010 (6)
2022 (6)
2018 (5)
2025 (5)
2020 (4)
2009 (4)
2016 (3)
2013 (3)
2023 (3)
2026 (3)
2017 (2)
2019 (2)
2011 (1)
2008 (1)

UNIPROT ID/AC

5833.MAL13P1.267 (2)
5833.MAL13P1.269 (2)
5833.MAL13P1.325 (2)
5833.MAL13P1.334 (2)
5833.MAL7P1.78 (2)
5833.MAL8P1.208 (2)
5833.MAL8P1.320 (2)
5833.PF11_0033 (2)
5833.PF11_0263 (2)
5833.PF11_0512 (2)
5833.PF13_0305 (2)
5833.PF13_0321 (2)
5833.PF14_0001 (2)
5833.PF14_0009 (2)
5833.PF14_0173 (2)
5833.PF14_0734 (2)
5833.PF14_0751 (2)
5833.PF14_0756 (2)
5833.PF14_0759 (2)
5833.PFA0105w (2)
5833.PFA0120c (2)
5833.PFA0705c (2)
5833.PFB0050c (2)
5833.PFB0280w (2)
5833.PFB0925w (2)
5833.PFB0946c (2)
5833.PFC1011c (2)
5833.PFC1075w (2)
5833.PFD0075w (2)
5833.PFD0100c (2)

CHEBI ID

CHEBI:16964 (3)
CHEBI:171896 (3)
CHEBI:15891 (3)
CHEBI:17561 (3)
CHEBI:27732 (3)
CHEBI:174822 (2)
CHEBI:170015 (2)
CHEBI:174200 (2)
CHEBI:50383 (2)
CHEBI:15889 (2)
CHEBI:138533 (2)
CHEBI:34671 (2)
CHEBI:36790 (2)
CHEBI:76451 (2)
CHEBI:28229 (2)
CHEBI:74349 (2)
CHEBI:139582 (2)
CHEBI:17808 (2)
CHEBI:28279 (2)
CHEBI:12936 (2)
CHEBI:16296 (2)
CHEBI:166762 (2)
CHEBI:166465 (2)
CHEBI:15558 (2)
CHEBI:17609 (2)
CHEBI:16153 (2)
CHEBI:34146 (2)
CHEBI:17364 (2)
CHEBI:165449 (2)
CHEBI:168729 (2)

Metabolite Name

Phosphatidylethanolamine(38:4) (1)
Phosphatidylethanolamine(36:4) (1)
Phosphatidylethanolamine(36:1) (1)
Phosphatidylcholine(40:8) (1)
Phosphatidylcholine(40:4) (1)
Phosphatidylcholine(38:6) (1)
Phosphatidylcholine(38:5) (1)
Phosphatidylcholine(36:3) (1)
Phosphatidylcholine(36:2) (1)
Phosphatidylcholine(35:2) (1)
Phosphatidylcholine(34:1) (1)
Phosphatidylcholine(34:2) (1)
Phosphatidylcholine(33:5) (1)
Phosphatidylcholine(32:2) (1)
Phosphatidylcholine(32:0) (1)
Phosphatidylcholine(31:0) (1)
Phosphatidylcholine(33:1) (1)
Phosphatidylcholine(30:0) (1)
Phosphatidylcholine(28:0) (1)
5-HYDROXY-L-TRYPTOPHAN (1)
N-METHYL-L-GLUTAMATE (1)
6-DEOXY-L-GALACTOSE (1)
O-ACETYL-L-CARNITINE (1)
2'-DEOXYCYTIDINE 5'-DIPHOSPHATE (1)
Hydroxyphenanthrene (1)
THIAMINE MONOPHOSPHATE (1)
D-ASPARTATE (1)
PHOSPHONOACETATE (1)
5.6-DIHYDROURACIL (1)
PIPECOLATE (1)

First Public Date

2020 (2)
2018 (2)
2016 (1)

Study type

Transcription profiling by array (33)
RNA-seq of coding RNA (9)
ChIP-seq (3)
Other (2)
RNA-seq of non coding RNA (2)
Animal - High-throughput sequencing (1)
Comparative genomic hybridization by array (1)
Methylation profiling by array (1)

Release Date

2022 (247)
2021 (226)
2025 (216)
2023 (215)
2024 (202)
2020 (168)
2018 (134)
2019 (125)
2015 (113)
2017 (112)
2016 (94)
2014 (73)
2013 (53)
2012 (42)
2026 (30)
2010 (29)
2011 (28)
2009 (22)
2008 (12)
2007 (7)
2006 (4)
2005 (3)
2004 (2)
2003 (1)
2002 (1)

Lab affiliation

ATLAS Lab, Turku Centre for Biotechnology, University of Turku and Åbo Akademi, Turku, Finland (1)
Associate Professor, Department of biotechnology and research, Sir Ganga ram hospital, New Delhi -110060, Delhi, India (1)
Cardeza Center for Vascular Biology Sidney Kimmel Medical College Thomas Jefferson University (1)
Cardiovascular & Metabolic Disorders, Duke-NUS Medical School, Singapore (1)
Center for Cancer Research, National Cancer Institute, National Institutes of Health (1)
Chief Scientist, Professor and Head, Cancer Biology Division CSIR-Central Drug Research Institute & AcSIR, LSS-006 Jankipuram Extension, Lucknow 226031, India (1)
Children's Hospital of Philadelphia Division of Oncology and Center for Childhood Cancer Research USA (1)
Department Chair • MCG - Department of Cellular Biology & Anatomy, Augusta University (1)
Department of Anatomy and Developmental Biology, Australian Regenerative Medicine Institute, Monash University, Australia (1)
Department of Biology, IISER Pune (1)
Department of Biotechnology, Jožef Stefan Institute, Ljubljana, Slovenia (1)
Department of Chemistry, Johns Hopkins University (1)
Department of Endocrinology PGIMER, Chandigarh India Dr. Akhilesh Pandey Department of Laboratory Medicine and Pathology Mayo Clinic Rochester, MN (1)
Department of Microbiology & Immunology, Columbia University Irving Medical Center, New York, NY, USA (1)
Department of Molecular Machines and Signaling, Max Planck Institute of Biochemistry, Martinsried, Germany (1)
Department of Neurosciences, Lerner Research Institute, Cleveland Clinic (1)
Department of Zoology, University of Delhi, Delhi, India (1)
Infectious Diseases, Department of Internal Medicine, Yale School of Medicine, Yale University, New Haven, CT 06520, USA; Howard Hughes Medical Institute, Chevy Chase, MD, 20815, USA (1)
Institute of Parasitology Biology Center, Czech Academy of Sciences Branišovská 31 370 05 České Budějovice (1)
Johns Hopkins Bloomberg School of Public Health (1)
National Institute of Immunology, New Delhi, India (1)
NeuroEpigenetics Lab - Department of Cellular, Computational and Integrative Biology - CIBIO University of Trento, Via Sommarive 9, I - 38123 Povo (Trento) (1)
Obesity and Metabolism Laboratory, The Institute for Drug Research, School of Pharmacy, Faculty of Medicine, The Hebrew University of Jerusalem, Israel. (1)
Professor, Department of Biochemistry, Faculty of Medicine and Dentistry, University of Alberta, Edmonton, Alberta, Canada (1)
Professor, Department of Biological Sciences, Birla Institute of Technology & Science, Pilani- 333031, Rajasthan. India. (1)
School of Biotechnology, Institute of Science, Banaras Hindu University, Varanasi-221005, India (1)
The University of Texas MD Anderson Cancer Center Director, Red & Charline McCombs Institute for the Early Detection and Treatment of Cancer Co-Director, Center for Global Cancer Early Detection Evelyn & Sol Rubenstein Distinguished Chair for Cancer Prevention Professor, Clinical Cancer Prevention-Research Professor, Translational Molecular Pathology (1)
Turku Bioscience, University of Turku and Åbo Akademi University (1)
University of Basel, Biozentrum, Klingelbergstrasse 50/70, CH-4056 Basel, Switzerland, Tel. +41 61 207 2059 (1)
Vice President Principal Scientist Ayass BioScience LLC (1)

Tags

xref:PubMed:29466736 (1)

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A polyamine-centric blood-based metabolite panel predictive of poor response to CAR T-cell therapy in large B cell lymphoma

Anti-CD19 chimeric antigen receptor (CAR) T-cell therapy for relapsed or refractory (r/r) large B-cell lymphoma (LBCL) results in durable response in only a subset of patients. MYC overexpression in LBCL tumors is associated with poor response to treatment. We tested whether a MYC-driven polyamin...

2022-10-31 | MTBLS5381 | MetaboLights

Structural elements that govern Sec14-like PITP sensitivities to potent small molecule inhibitors.

Not available

S-EPMC4808773 | biostudies-literature

Functional diversification of the chemical landscapes of yeast Sec14-like phosphatidylinositol transfer protein lipid-binding cavities.

Not available

S-EPMC6916498 | biostudies-literature

Transcriptomics analyses of soybean leaf and root samples during water-deficit.

Not available

S-EPMC4583655 | biostudies-literature

A Lipid Transfer Protein Signaling Axis Exerts Dual Control of Cell-Cycle and Membrane Trafficking Systems.

Not available

S-EPMC6444186 | biostudies-literature

ATF3 is a positive regulator of human IFN gene expression

The aim of this study was to identify genes regulated by IL-12, IL-18 and IFN-alpha during early differentiation of human Th1 cells Human cord blood CD4+ T cells were activated via TCR and cultured in the presence of IL-12, IFN-alpha or IL-12+IL-18. Cytokine induced gene expression was compared to a...

ORGANISM(S): Homo sapiens

2010-04-11 | E-GEOD-20198 | biostudies-arrayexpress

Surgical Outcomes and Patient Satisfaction With the Low-Cost, Semi-Rigid Shah Penile Prosthesis: A boon to the Developing Countries.

Not available

S-EPMC8360909 | biostudies-literature

Structural designing of Zn₂SiO₄:Mn nanocrystals by co-doping of alkali metal ions in mesoporous silica channels for enhanced emission efficiency with short decay time.

Not available

S-EPMC9043469 | biostudies-literature

Identification and functional characterization of a fructose-inducible phosphotransferase system in Azospirillum brasilense Sp7

Plant growth promoting rhizobacterium Azospirillum brasilense Sp7 utilizes fructose efficiently via a fructose phosphotransferase system (Fru-PTS). Its genome encodes two putative Fru-PTS, each consisting of FruB (EIIA), FruK (Pfk) and FruA (EIIBC) proteins. We compared the proteomes of A. brasilens...

ORGANISM(S): Azospirillum sp. Sp 7

2024-11-04 | PXD055876 | Pride

Portal vein thrombosis in cirrhosis: Controversies and latest developments.

Not available

S-EPMC4462717 | biostudies-literature

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